SEQF6590.2|AGHT01000081.1	CCTyper	repeat_region	8675	9128	454	+	.	ID=SEQF6590.2|AGHT01000081.1_1;Genome_ID=SEQF6590.2;Note=Predictor:CCtyper;Start:8675;End:9128;Consensus_Repeat:CAAGTTTCCGTCCCCTTACGAGG;Number_of_Repeats:7;Repeat_Length:23.0;Average_Spacer_Length:48.8;Repeat_Identity:85.0;Spacer_Identity:52.7;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.989;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000081.1	CCTyper	direct_repeat	8675	8697	23	+	.	ID=SEQF6590.2|AGHT01000081.1_1_REPEAT1;Parent=SEQF6590.2|AGHT01000081.1_1;Note=ATAATTTCTGTCCCCTTACGAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000081.1	CCTyper	binding_site	8698	8747	50	+	.	ID=SEQF6590.2|AGHT01000081.1_1_SPACER1;Parent=SEQF6590.2|AGHT01000081.1_1;Note=ATATGGGGCATTCAATTCTTGGTTCGTAGAGGCGACAAGGCCTTAACTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000081.1	CCTyper	direct_repeat	8748	8770	23	+	.	ID=SEQF6590.2|AGHT01000081.1_1_REPEAT2;Parent=SEQF6590.2|AGHT01000081.1_1;Note=ATAGTTTCCGTCCCCTTACGAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000081.1	CCTyper	binding_site	8771	8818	48	+	.	ID=SEQF6590.2|AGHT01000081.1_1_SPACER2;Parent=SEQF6590.2|AGHT01000081.1_1;Note=GTATGAGGATTTCAATGATGAACTAGTTGACCGACGAGGCGAAGTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000081.1	CCTyper	direct_repeat	8819	8841	23	+	.	ID=SEQF6590.2|AGHT01000081.1_1_REPEAT3;Parent=SEQF6590.2|AGHT01000081.1_1;Note=AATGTTTCCGCCCCCTTACGAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000081.1	CCTyper	binding_site	8842	8889	48	+	.	ID=SEQF6590.2|AGHT01000081.1_1_SPACER3;Parent=SEQF6590.2|AGHT01000081.1_1;Note=GTATGGGACATTCAATCAACGACTAACGAACGGTCAACCTATGAATGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000081.1	CCTyper	direct_repeat	8890	8912	23	+	.	ID=SEQF6590.2|AGHT01000081.1_1_REPEAT4;Parent=SEQF6590.2|AGHT01000081.1_1;Note=CAAGTTTCCGTCCCCTTACGAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000081.1	CCTyper	binding_site	8913	8961	49	+	.	ID=SEQF6590.2|AGHT01000081.1_1_SPACER4;Parent=SEQF6590.2|AGHT01000081.1_1;Note=GTATGGGGCATTCAATAAACAAACCGAAGAAGTGACGGCTATCTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000081.1	CCTyper	direct_repeat	8962	8984	23	+	.	ID=SEQF6590.2|AGHT01000081.1_1_REPEAT5;Parent=SEQF6590.2|AGHT01000081.1_1;Note=CAAGTTTCCGTCCCCTTACGAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000081.1	CCTyper	binding_site	8985	9033	49	+	.	ID=SEQF6590.2|AGHT01000081.1_1_SPACER5;Parent=SEQF6590.2|AGHT01000081.1_1;Note=CTATGGGGTATTCAATAAGGAAAGGGGCTAACATAAGATTGGCCAAGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000081.1	CCTyper	direct_repeat	9034	9056	23	+	.	ID=SEQF6590.2|AGHT01000081.1_1_REPEAT6;Parent=SEQF6590.2|AGHT01000081.1_1;Note=AAAGTTTCCGTCCCCTTACGAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000081.1	CCTyper	binding_site	9057	9105	49	+	.	ID=SEQF6590.2|AGHT01000081.1_1_SPACER6;Parent=SEQF6590.2|AGHT01000081.1_1;Note=CTATGGGGTATTCAATCCTAGAAGCTGTTGAGGACCACAAAAAAGCCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000081.1	CCTyper	direct_repeat	9106	9128	23	+	.	ID=SEQF6590.2|AGHT01000081.1_1_REPEAT7;Parent=SEQF6590.2|AGHT01000081.1_1;Note=CACGTTTCCGTCCCCTTACGAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000130.1	CCTyper	repeat_region	2662	3194	533	+	.	ID=SEQF6590.2|AGHT01000130.1-1_3;Genome_ID=SEQF6590.2;Note=Predictor:CCtyper;Start:2662;End:3194;Consensus_Repeat:ATTGAAAGCCCCATACCCTCGTAAGGGGACGGAAAC;Number_of_Repeats:8;Repeat_Length:36.2;Average_Spacer_Length:34.7;Repeat_Identity:89.5;Spacer_Identity:43.6;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.972;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000130.1	CCTyper	direct_repeat	2662	2697	36	+	.	ID=SEQF6590.2|AGHT01000130.1-1_3_REPEAT1;Parent=SEQF6590.2|AGHT01000130.1-1_3;Note=ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000130.1	CCTyper	binding_site	2698	2732	35	+	.	ID=SEQF6590.2|AGHT01000130.1-1_3_SPACER1;Parent=SEQF6590.2|AGHT01000130.1-1_3;Note=TTAACTGCTGAAAACAGTTCGGTGTTTTTCATTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000130.1	CCTyper	direct_repeat	2733	2768	36	+	.	ID=SEQF6590.2|AGHT01000130.1-1_3_REPEAT2;Parent=SEQF6590.2|AGHT01000130.1-1_3;Note=ATTGAATGCCCCATATCCTTGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000130.1	CCTyper	binding_site	2769	2802	34	+	.	ID=SEQF6590.2|AGHT01000130.1-1_3_SPACER2;Parent=SEQF6590.2|AGHT01000130.1-1_3;Note=GCGTCATCGTTAGGTTTAACCTTTGTATGAGACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000130.1	CCTyper	direct_repeat	2803	2838	36	+	.	ID=SEQF6590.2|AGHT01000130.1-1_3_REPEAT3;Parent=SEQF6590.2|AGHT01000130.1-1_3;Note=ATTGAATGCCCCATAGCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000130.1	CCTyper	binding_site	2839	2872	34	+	.	ID=SEQF6590.2|AGHT01000130.1-1_3_SPACER3;Parent=SEQF6590.2|AGHT01000130.1-1_3;Note=TGTTCAGTGTCCGGGTCATAGATTTTTCCGTCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000130.1	CCTyper	direct_repeat	2873	2909	37	+	.	ID=SEQF6590.2|AGHT01000130.1-1_3_REPEAT4;Parent=SEQF6590.2|AGHT01000130.1-1_3;Note=ATTGAAAGCCCCATACCTTCGTAAGGGGACGGAAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000130.1	CCTyper	binding_site	2910	2943	34	+	.	ID=SEQF6590.2|AGHT01000130.1-1_3_SPACER4;Parent=SEQF6590.2|AGHT01000130.1-1_3;Note=GTAATTCTTCATGGTCTTTATCACTCATCTCATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000130.1	CCTyper	direct_repeat	2944	2980	37	+	.	ID=SEQF6590.2|AGHT01000130.1-1_3_REPEAT5;Parent=SEQF6590.2|AGHT01000130.1-1_3;Note=ATTGAATGCCCCATAGCCTCGTAAGGGGACGGAAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000130.1	CCTyper	binding_site	2981	3014	34	+	.	ID=SEQF6590.2|AGHT01000130.1-1_3_SPACER5;Parent=SEQF6590.2|AGHT01000130.1-1_3;Note=ATCCAACAAACGTTCCATGTTCTGTCATACCTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000130.1	CCTyper	direct_repeat	3015	3050	36	+	.	ID=SEQF6590.2|AGHT01000130.1-1_3_REPEAT6;Parent=SEQF6590.2|AGHT01000130.1-1_3;Note=ATTGAAAGCCCCATACCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000130.1	CCTyper	binding_site	3051	3086	36	+	.	ID=SEQF6590.2|AGHT01000130.1-1_3_SPACER6;Parent=SEQF6590.2|AGHT01000130.1-1_3;Note=CCTTGCCAGCCTTTTGACTGGCTCCTTTCTTTATCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000130.1	CCTyper	direct_repeat	3087	3122	36	+	.	ID=SEQF6590.2|AGHT01000130.1-1_3_REPEAT7;Parent=SEQF6590.2|AGHT01000130.1-1_3;Note=ATTGAATGCCCCGTATCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000130.1	CCTyper	binding_site	3123	3158	36	+	.	ID=SEQF6590.2|AGHT01000130.1-1_3_SPACER7;Parent=SEQF6590.2|AGHT01000130.1-1_3;Note=CATATAGTTCATCATGTAAGGGACTCGTCTTAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000130.1	CCTyper	direct_repeat	3159	3194	36	+	.	ID=SEQF6590.2|AGHT01000130.1-1_3_REPEAT8;Parent=SEQF6590.2|AGHT01000130.1-1_3;Note=ATTGAAAGCCCCATACCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6590.2|AGHT01000081.1	CCTyper	OPERON	1184	8457	7274	-	.	ID=SEQF6590.2|AGHT01000081.1@1;Genome_ID=SEQF6590.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=16.0;Genes=Csm6_1_CAS-III,Csm5gr7_0_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_7_CAS-III-A,Cas10_1_CAS-III,Cas6_0_CAS-I-II-III-IV-V-VI;Positions=2,3,4,5,6,7,8;E-values=4.70e-77,1.90e-31,2.50e-36,3.50e-72,3.40e-23,1.70e-186,6.40e-27;CoverageSeq=0.834,0.808,0.983,0.923,0.911,0.819,0.751;CoverageHMM=0.956,0.792,0.975,0.986,0.982,0.997,0.856;Strand_Interference=-1;Strand_Adaptation=NA
SEQF6590.2|AGHT01000081.1	CCTyper	CDS	5427	7742	772	-	.	ID=SEQF6590.2|AGHT01000081.1_7_cas;Genome_ID=SEQF6590.2;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=-;E-value=1.7000000000000002e-186;Score=618.5;Coverage_Seq=0.8186528497409327;Coverage_Hmm=0.9969418960244648
SEQF6590.2|AGHT01000081.1	CCTyper	CDS	7735	8457	241	-	.	ID=SEQF6590.2|AGHT01000081.1_8_cas;Genome_ID=SEQF6590.2;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.4000000000000005e-27;Score=92.1;Coverage_Seq=0.7510373443983402;Coverage_Hmm=0.8556701030927835
SEQF6590.2|AGHT01000081.1	CCTyper	CDS	5078	5446	123	-	.	ID=SEQF6590.2|AGHT01000081.1_6_cas;Genome_ID=SEQF6590.2;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=-;E-value=3.4e-23;Score=79.7;Coverage_Seq=0.9105691056910569;Coverage_Hmm=0.9818181818181818
SEQF6590.2|AGHT01000081.1	CCTyper	CDS	4416	5081	222	-	.	ID=SEQF6590.2|AGHT01000081.1_5_cas;Genome_ID=SEQF6590.2;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=3.5e-72;Score=239.6;Coverage_Seq=0.9234234234234234;Coverage_Hmm=0.986046511627907
SEQF6590.2|AGHT01000081.1	CCTyper	CDS	3515	4414	300	-	.	ID=SEQF6590.2|AGHT01000081.1_4_cas;Genome_ID=SEQF6590.2;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=2.5e-36;Score=122.4;Coverage_Seq=0.9833333333333333;Coverage_Hmm=0.9746031746031746
SEQF6590.2|AGHT01000081.1	CCTyper	CDS	2467	3513	349	-	.	ID=SEQF6590.2|AGHT01000081.1_3_cas;Genome_ID=SEQF6590.2;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=-;E-value=1.9e-31;Score=106.6;Coverage_Seq=0.8080229226361032;Coverage_Hmm=0.7917808219178082
SEQF6590.2|AGHT01000081.1	CCTyper	CDS	1184	2470	429	-	.	ID=SEQF6590.2|AGHT01000081.1_2_cas;Genome_ID=SEQF6590.2;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=-;E-value=4.7e-77;Score=256.2;Coverage_Seq=0.8344988344988346;Coverage_Hmm=0.9555555555555556