SEQF6591.2|AGHQ01000084.1	CCTyper	repeat_region	3001	3964	964	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1;Genome_ID=SEQF6591.2;Note=Predictor:CCtyper;Start:3001;End:3964;Consensus_Repeat:GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Number_of_Repeats:14;Repeat_Length:36.2;Average_Spacer_Length:35.2;Repeat_Identity:88.9;Spacer_Identity:44.3;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.971;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	direct_repeat	3001	3037	37	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_REPEAT1;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=TGTTTCCGCCCCCTTACGAGGGTATGGGACATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	binding_site	3038	3072	35	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_SPACER1;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=CAACGACTAACGAACGGTCAACCTATGAATGACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	direct_repeat	3073	3108	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_REPEAT2;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	binding_site	3109	3144	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_SPACER2;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=AAACAAACCGAAGAAGTGACGGCTATCTTTAATCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	direct_repeat	3145	3180	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_REPEAT3;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=GTTTCCGTCCCCTTACGAGGCTATGGGGTATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	binding_site	3181	3216	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_SPACER3;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=AAGGAAAGGGGCTAACATAAGATTGGCCAAGGTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	direct_repeat	3217	3252	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_REPEAT4;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=GTTTCCGTCCCCTTACGAGGCTATGGGGTATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	binding_site	3253	3288	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_SPACER4;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=CCTAGAAGCTGTTGAGGACCACAAAAAAGCCTTCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	direct_repeat	3289	3324	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_REPEAT5;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	binding_site	3325	3359	35	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_SPACER5;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=CGCTACATCTCACCAATCGCAACCTACATCAAAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	direct_repeat	3360	3395	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_REPEAT6;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCTTTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	binding_site	3396	3431	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_SPACER6;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=GGTCTAAGACGAGTCCCTTACATGATGAACTATATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	direct_repeat	3432	3467	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_REPEAT7;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=GTTTCCGTCCCCTTACGAGGATACGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	binding_site	3468	3503	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_SPACER7;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=AGATAAAGAAAGGAGCCAGTCAAAAGGCTGGCAAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	direct_repeat	3504	3539	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_REPEAT8;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCTTTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	binding_site	3540	3573	34	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_SPACER8;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=AAAGGTATGACAGAACATGGAACGTTTGTTGGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	direct_repeat	3574	3610	37	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_REPEAT9;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=TGTTTCCGTCCCCTTACGAGGCTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	binding_site	3611	3644	34	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_SPACER9;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=CATGAGATGAGTGATAAAGACCATGAAGAATTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	direct_repeat	3645	3681	37	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_REPEAT10;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=TGTTTCCGTCCCCTTACGAAGGTATGGGGCTTTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	binding_site	3682	3715	34	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_SPACER10;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=TTGACGGAAAAATCTATGACCCGGACACTGAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	direct_repeat	3716	3751	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_REPEAT11;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=GTTTCCGTCCCCTTACGAGGCTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	binding_site	3752	3785	34	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_SPACER11;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=TGTCTCATACAAAGGTTAAACCTAACGATGACGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	direct_repeat	3786	3821	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_REPEAT12;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=GTTTCCGTCCCCTTACAAGGATATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	binding_site	3822	3856	35	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_SPACER12;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=GAAATGAAAAACACCGAACTGTTTTCAGCAGTTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	direct_repeat	3857	3892	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_REPEAT13;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	binding_site	3893	3928	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_SPACER13;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=AAGCCTACCGTTATACGAACGTTATACAGCCCACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000084.1	CCTyper	direct_repeat	3929	3964	36	+	.	ID=SEQF6591.2|AGHQ01000084.1-1_1_REPEAT14;Parent=SEQF6591.2|AGHQ01000084.1-1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6591.2|AGHQ01000141.1	CCTyper	OPERON	851	5480	4630	-	.	ID=SEQF6591.2|AGHQ01000141.1@1;Genome_ID=SEQF6591.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=80%;Complete_Adaptation=NA;Best_type=III-A;Best_score=13.0;Genes=Csm6_1_CAS-III,Csm5gr7_0_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_7_CAS-III-A,Csm2gr11_5_CAS-III-A;Positions=2,3,4,5,6,7;E-values=5.10e-77,2.00e-31,2.70e-36,3.80e-72,3.70e-23,1.30e-03;CoverageSeq=0.834,0.808,0.983,0.923,0.911,0.69;CoverageHMM=0.956,0.792,0.975,0.986,0.982,0.775;Strand_Interference=-1;Strand_Adaptation=NA
SEQF6591.2|AGHQ01000141.1	CCTyper	CDS	5094	5480	129	-	.	ID=SEQF6591.2|AGHQ01000141.1_7_cas;Genome_ID=SEQF6591.2;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_5_CAS-III-A;coding_strand=-;E-value=0.0013;Score=15.8;Coverage_Seq=0.689922480620155;Coverage_Hmm=0.775
SEQF6591.2|AGHQ01000141.1	CCTyper	CDS	4745	5113	123	-	.	ID=SEQF6591.2|AGHQ01000141.1_6_cas;Genome_ID=SEQF6591.2;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=-;E-value=3.7e-23;Score=79.7;Coverage_Seq=0.9105691056910569;Coverage_Hmm=0.9818181818181818
SEQF6591.2|AGHQ01000141.1	CCTyper	CDS	4083	4748	222	-	.	ID=SEQF6591.2|AGHQ01000141.1_5_cas;Genome_ID=SEQF6591.2;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=3.8e-72;Score=239.6;Coverage_Seq=0.9234234234234234;Coverage_Hmm=0.986046511627907
SEQF6591.2|AGHQ01000141.1	CCTyper	CDS	3182	4081	300	-	.	ID=SEQF6591.2|AGHQ01000141.1_4_cas;Genome_ID=SEQF6591.2;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=2.7e-36;Score=122.4;Coverage_Seq=0.9833333333333333;Coverage_Hmm=0.9746031746031746
SEQF6591.2|AGHQ01000141.1	CCTyper	CDS	2134	3180	349	-	.	ID=SEQF6591.2|AGHQ01000141.1_3_cas;Genome_ID=SEQF6591.2;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=-;E-value=2e-31;Score=106.6;Coverage_Seq=0.8080229226361032;Coverage_Hmm=0.7917808219178082
SEQF6591.2|AGHQ01000141.1	CCTyper	CDS	851	2137	429	-	.	ID=SEQF6591.2|AGHQ01000141.1_2_cas;Genome_ID=SEQF6591.2;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=-;E-value=5.1e-77;Score=256.2;Coverage_Seq=0.8344988344988346;Coverage_Hmm=0.9555555555555556