SEQF6594.2|AGGS01000069.1	CCTyper	repeat_region	8337	9299	963	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1;Genome_ID=SEQF6594.2;Note=Predictor:CCtyper;Start:8337;End:9299;Consensus_Repeat:GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Number_of_Repeats:14;Repeat_Length:36.2;Average_Spacer_Length:35.1;Repeat_Identity:88.9;Spacer_Identity:44.6;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.971;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	direct_repeat	8337	8373	37	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_REPEAT1;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=TGTTTCCGCCCCCTTACGAGGGTATGGGACATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	binding_site	8374	8408	35	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_SPACER1;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=CAACGACTAACGAACGGTCAACCTATGAATGACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	direct_repeat	8409	8444	36	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_REPEAT2;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	binding_site	8445	8480	36	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_SPACER2;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=AAACAAACCGAAGAAGTGACGGCTATCTTTAATCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	direct_repeat	8481	8516	36	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_REPEAT3;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=GTTTCCGTCCCCTTACGAGGCTATGGGGTATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	binding_site	8517	8552	36	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_SPACER3;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=AAGGAAAGGGGCTAACATAAGATTGGCCAAGGTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	direct_repeat	8553	8588	36	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_REPEAT4;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=GTTTCCGTCCCCTTACGAGGCTATGGGGTATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	binding_site	8589	8624	36	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_SPACER4;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=CCTAGAAGCTGTTGAGGACCACAAAAAAGCCTTCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	direct_repeat	8625	8660	36	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_REPEAT5;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	binding_site	8661	8695	35	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_SPACER5;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=CGCTACATCTCACCAATCGCAACCTACATCAAAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	direct_repeat	8696	8731	36	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_REPEAT6;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCTTTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	binding_site	8732	8767	36	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_SPACER6;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=GGTCTAAGACGAGTCCCTTACATGATGAACTATATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	direct_repeat	8768	8803	36	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_REPEAT7;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=GTTTCCGTCCCCTTACGAGGATACGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	binding_site	8804	8839	36	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_SPACER7;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=AGATAAAGAAAGGAGCCAGTCAAAAGGCTGGCAAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	direct_repeat	8840	8875	36	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_REPEAT8;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCTTTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	binding_site	8876	8909	34	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_SPACER8;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=AAAGGTATGACAGAACATGGAACGTTTGTTGGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	direct_repeat	8910	8946	37	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_REPEAT9;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=TGTTTCCGTCCCCTTACGAGGCTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	binding_site	8947	8980	34	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_SPACER9;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=CATGAGATGAGTGATAAAGACCATGAAGAATTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	direct_repeat	8981	9017	37	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_REPEAT10;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=TGTTTCCGTCCCCTTACGAAGGTATGGGGCTTTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	binding_site	9018	9051	34	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_SPACER10;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=TTGACGGAAAAATCTATGACCCGGACACTGAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	direct_repeat	9052	9087	36	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_REPEAT11;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=GTTTCCGTCCCCTTACGAGGCTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	binding_site	9088	9121	34	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_SPACER11;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=TGTCTCATACAAAGGTTAAACCTAACGATGACGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	direct_repeat	9122	9157	36	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_REPEAT12;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=GTTTCCGTCCCCTTACAAGGATATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	binding_site	9158	9192	35	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_SPACER12;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=GAAATGAAAAACACCGAACTGTTTTCAGCAGTTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	direct_repeat	9193	9228	36	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_REPEAT13;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	binding_site	9229	9263	35	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_SPACER13;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=TTGACCAGAGTAAACTATAATAGACAAGAGACAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	direct_repeat	9264	9299	36	+	.	ID=SEQF6594.2|AGGS01000069.1-1_1_REPEAT14;Parent=SEQF6594.2|AGGS01000069.1-1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6594.2|AGGS01000069.1	CCTyper	OPERON	700	10736	10037	-	.	ID=SEQF6594.2|AGGS01000069.1@1;Genome_ID=SEQF6594.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=18.0;Genes=Csm6_1_CAS-III,Csm5gr7_0_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_7_CAS-III-A,Cas10_1_CAS-III,Cas6_0_CAS-I-II-III-IV-V-VI,Cas2_2_CAS-I-II-III-IV-V-VI,Cas1_0_CAS-I-II-III-IV-V-VI;Positions=2,3,4,5,6,7,8,9,10;E-values=4.80e-77,1.90e-31,2.50e-36,3.60e-72,3.50e-23,7.40e-186,6.50e-27,8.70e-21,1.50e-80;CoverageSeq=0.834,0.808,0.89,0.923,0.911,0.819,0.751,0.636,0.949;CoverageHMM=0.956,0.792,0.819,0.986,0.982,0.997,0.856,0.873,0.994;Strand_Interference=-1;Strand_Adaptation=NA
SEQF6594.2|AGGS01000069.1	CCTyper	CDS	4943	7258	772	-	.	ID=SEQF6594.2|AGGS01000069.1_7_cas;Genome_ID=SEQF6594.2;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=-;E-value=7.4e-186;Score=616.4;Coverage_Seq=0.8186528497409327;Coverage_Hmm=0.9969418960244648
SEQF6594.2|AGGS01000069.1	CCTyper	CDS	9732	10736	335	-	.	ID=SEQF6594.2|AGGS01000069.1_10_cas;Genome_ID=SEQF6594.2;Feature_type=CDS;Product=Cas Prediction : Cas1_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.5e-80;Score=267.6;Coverage_Seq=0.9492537313432836;Coverage_Hmm=0.9936908517350158
SEQF6594.2|AGGS01000069.1	CCTyper	CDS	9398	9727	110	-	.	ID=SEQF6594.2|AGGS01000069.1_9_cas;Genome_ID=SEQF6594.2;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.7e-21;Score=70.9;Coverage_Seq=0.6363636363636364;Coverage_Hmm=0.8734177215189873
SEQF6594.2|AGGS01000069.1	CCTyper	CDS	7251	7973	241	-	.	ID=SEQF6594.2|AGGS01000069.1_8_cas;Genome_ID=SEQF6594.2;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.5e-27;Score=92.1;Coverage_Seq=0.7510373443983402;Coverage_Hmm=0.8556701030927835
SEQF6594.2|AGGS01000069.1	CCTyper	CDS	4594	4962	123	-	.	ID=SEQF6594.2|AGGS01000069.1_6_cas;Genome_ID=SEQF6594.2;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=-;E-value=3.5e-23;Score=79.7;Coverage_Seq=0.9105691056910569;Coverage_Hmm=0.9818181818181818
SEQF6594.2|AGGS01000069.1	CCTyper	CDS	3932	4597	222	-	.	ID=SEQF6594.2|AGGS01000069.1_5_cas;Genome_ID=SEQF6594.2;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=3.6e-72;Score=239.6;Coverage_Seq=0.9234234234234234;Coverage_Hmm=0.986046511627907
SEQF6594.2|AGGS01000069.1	CCTyper	CDS	3031	3930	300	-	.	ID=SEQF6594.2|AGGS01000069.1_4_cas;Genome_ID=SEQF6594.2;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=2.5e-36;Score=122.4;Coverage_Seq=0.89;Coverage_Hmm=0.819047619047619
SEQF6594.2|AGGS01000069.1	CCTyper	CDS	1983	3029	349	-	.	ID=SEQF6594.2|AGGS01000069.1_3_cas;Genome_ID=SEQF6594.2;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=-;E-value=1.9e-31;Score=106.6;Coverage_Seq=0.8080229226361032;Coverage_Hmm=0.7917808219178082
SEQF6594.2|AGGS01000069.1	CCTyper	CDS	700	1986	429	-	.	ID=SEQF6594.2|AGGS01000069.1_2_cas;Genome_ID=SEQF6594.2;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=-;E-value=4.8e-77;Score=256.2;Coverage_Seq=0.8344988344988346;Coverage_Hmm=0.9555555555555556