SEQF6599.2|AGHU01000142.1	CCTyper	repeat_region	2506	3256	751	+	.	ID=SEQF6599.2|AGHU01000142.1_1;Genome_ID=SEQF6599.2;Note=Predictor:CCtyper;Start:2506;End:3256;Consensus_Repeat:ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC;Number_of_Repeats:11;Repeat_Length:36;Average_Spacer_Length:35.5;Repeat_Identity:85.4;Spacer_Identity:44.9;Spacer_Length_Sem:0.8;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.971;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	direct_repeat	2506	2541	36	+	.	ID=SEQF6599.2|AGHU01000142.1_1_REPEAT1;Parent=SEQF6599.2|AGHU01000142.1_1;Note=ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	binding_site	2542	2576	35	+	.	ID=SEQF6599.2|AGHU01000142.1_1_SPACER1;Parent=SEQF6599.2|AGHU01000142.1_1;Note=AAATACGTCCTTCTGGACTTAATAACATACTACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	direct_repeat	2577	2612	36	+	.	ID=SEQF6599.2|AGHU01000142.1_1_REPEAT2;Parent=SEQF6599.2|AGHU01000142.1_1;Note=ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	binding_site	2613	2648	36	+	.	ID=SEQF6599.2|AGHU01000142.1_1_SPACER2;Parent=SEQF6599.2|AGHU01000142.1_1;Note=TGTTTGTAGTATTTACTGTCAACATTAAGCGGTAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	direct_repeat	2649	2684	36	+	.	ID=SEQF6599.2|AGHU01000142.1_1_REPEAT3;Parent=SEQF6599.2|AGHU01000142.1_1;Note=ATTGAATGCCCCATACCCTCGCAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	binding_site	2685	2717	33	+	.	ID=SEQF6599.2|AGHU01000142.1_1_SPACER3;Parent=SEQF6599.2|AGHU01000142.1_1;Note=ACAATGGTAAGCCCTGTCACGTATAGAGTTAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	direct_repeat	2718	2753	36	+	.	ID=SEQF6599.2|AGHU01000142.1_1_REPEAT4;Parent=SEQF6599.2|AGHU01000142.1_1;Note=ATTGAATGCCCTATACCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	binding_site	2754	2795	42	+	.	ID=SEQF6599.2|AGHU01000142.1_1_SPACER4;Parent=SEQF6599.2|AGHU01000142.1_1;Note=TAGTCGTTAATATTGCCTAATAGAGCTTCCAACTTGATTGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	direct_repeat	2796	2831	36	+	.	ID=SEQF6599.2|AGHU01000142.1_1_REPEAT5;Parent=SEQF6599.2|AGHU01000142.1_1;Note=TGCCCCATAGCCTCAGCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	binding_site	2832	2866	35	+	.	ID=SEQF6599.2|AGHU01000142.1_1_SPACER5;Parent=SEQF6599.2|AGHU01000142.1_1;Note=TCATAGCGGTCAAATTTTTCTTCGCTGTAATCTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	direct_repeat	2867	2902	36	+	.	ID=SEQF6599.2|AGHU01000142.1_1_REPEAT6;Parent=SEQF6599.2|AGHU01000142.1_1;Note=ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	binding_site	2903	2938	36	+	.	ID=SEQF6599.2|AGHU01000142.1_1_SPACER6;Parent=SEQF6599.2|AGHU01000142.1_1;Note=TCAACAGTCGCCCTGGTAACGCAGTTTGAATAATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	direct_repeat	2939	2974	36	+	.	ID=SEQF6599.2|AGHU01000142.1_1_REPEAT7;Parent=SEQF6599.2|AGHU01000142.1_1;Note=ATTGAATGCCCCATACCCTCGTAAAGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	binding_site	2975	3010	36	+	.	ID=SEQF6599.2|AGHU01000142.1_1_SPACER7;Parent=SEQF6599.2|AGHU01000142.1_1;Note=TATCCACCGTCAACTTTTACCCACTCTGTCTTATCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	direct_repeat	3011	3046	36	+	.	ID=SEQF6599.2|AGHU01000142.1_1_REPEAT8;Parent=SEQF6599.2|AGHU01000142.1_1;Note=ATTGAATGCCCTATACCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	binding_site	3047	3080	34	+	.	ID=SEQF6599.2|AGHU01000142.1_1_SPACER8;Parent=SEQF6599.2|AGHU01000142.1_1;Note=ACGTCACTCATATTTTCTAAGTCCCAATCATCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	direct_repeat	3081	3116	36	+	.	ID=SEQF6599.2|AGHU01000142.1_1_REPEAT9;Parent=SEQF6599.2|AGHU01000142.1_1;Note=ATTGAAATCCCCATAGCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	binding_site	3117	3149	33	+	.	ID=SEQF6599.2|AGHU01000142.1_1_SPACER9;Parent=SEQF6599.2|AGHU01000142.1_1;Note=TTTCCATGAGGTCGTAAAAATCTGCGTTCATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	direct_repeat	3150	3185	36	+	.	ID=SEQF6599.2|AGHU01000142.1_1_REPEAT10;Parent=SEQF6599.2|AGHU01000142.1_1;Note=ATTGAATGTCCCATACCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	binding_site	3186	3220	35	+	.	ID=SEQF6599.2|AGHU01000142.1_1_SPACER10;Parent=SEQF6599.2|AGHU01000142.1_1;Note=CATAAAGGGTCAAGATTTCTGTCATCCGATTCTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000142.1	CCTyper	direct_repeat	3221	3256	36	+	.	ID=SEQF6599.2|AGHU01000142.1_1_REPEAT11;Parent=SEQF6599.2|AGHU01000142.1_1;Note=ATTGAAATCCCCATCCCCTCGTAAGGGGACAGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6599.2|AGHU01000086.1	CCTyper	OPERON	4493	9107	4615	-	.	ID=SEQF6599.2|AGHU01000086.1@1;Genome_ID=SEQF6599.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=80%;Complete_Adaptation=NA;Best_type=III-A;Best_score=13.0;Genes=Csm6_1_CAS-III,Csm5gr7_0_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_7_CAS-III-A,Csm2gr11_5_CAS-III-A;Positions=3,4,5,6,7,8;E-values=4.90e-77,1.70e-31,2.60e-36,3.70e-72,3.60e-23,1.20e-03;CoverageSeq=0.834,0.808,0.983,0.923,0.911,0.718;CoverageHMM=0.956,0.792,0.975,0.986,0.982,0.775;Strand_Interference=-1;Strand_Adaptation=NA
SEQF6599.2|AGHU01000086.1	CCTyper	CDS	8736	9107	124	-	.	ID=SEQF6599.2|AGHU01000086.1_8_cas;Genome_ID=SEQF6599.2;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_5_CAS-III-A;coding_strand=-;E-value=0.0012;Score=15.8;Coverage_Seq=0.717741935483871;Coverage_Hmm=0.775
SEQF6599.2|AGHU01000086.1	CCTyper	CDS	8387	8755	123	-	.	ID=SEQF6599.2|AGHU01000086.1_7_cas;Genome_ID=SEQF6599.2;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=-;E-value=3.6e-23;Score=79.7;Coverage_Seq=0.9105691056910569;Coverage_Hmm=0.9818181818181818
SEQF6599.2|AGHU01000086.1	CCTyper	CDS	7725	8390	222	-	.	ID=SEQF6599.2|AGHU01000086.1_6_cas;Genome_ID=SEQF6599.2;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=3.7e-72;Score=239.6;Coverage_Seq=0.9234234234234234;Coverage_Hmm=0.986046511627907
SEQF6599.2|AGHU01000086.1	CCTyper	CDS	6824	7723	300	-	.	ID=SEQF6599.2|AGHU01000086.1_5_cas;Genome_ID=SEQF6599.2;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=2.6e-36;Score=122.4;Coverage_Seq=0.9833333333333333;Coverage_Hmm=0.9746031746031746
SEQF6599.2|AGHU01000086.1	CCTyper	CDS	5776	6822	349	-	.	ID=SEQF6599.2|AGHU01000086.1_4_cas;Genome_ID=SEQF6599.2;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=-;E-value=1.6999999999999998e-31;Score=106.7;Coverage_Seq=0.8080229226361032;Coverage_Hmm=0.7917808219178082
SEQF6599.2|AGHU01000086.1	CCTyper	CDS	4493	5779	429	-	.	ID=SEQF6599.2|AGHU01000086.1_3_cas;Genome_ID=SEQF6599.2;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=-;E-value=4.9e-77;Score=256.2;Coverage_Seq=0.8344988344988346;Coverage_Hmm=0.9555555555555556