SEQF6608.2|AGGM01000159.1	CCTyper	repeat_region	682	1703	1022	+	.	ID=SEQF6608.2|AGGM01000159.1_1;Genome_ID=SEQF6608.2;Note=Predictor:CCtyper;Start:682;End:1703;Consensus_Repeat:CCTCGTAAGGGGACGGAAACTTG;Number_of_Repeats:15;Repeat_Length:23;Average_Spacer_Length:48.4;Repeat_Identity:80.3;Spacer_Identity:54.2;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.989;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	direct_repeat	682	704	23	+	.	ID=SEQF6608.2|AGGM01000159.1_1_REPEAT1;Parent=SEQF6608.2|AGGM01000159.1_1;Note=CCTCGTAAGGGGACGGAAACTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	binding_site	705	752	48	+	.	ID=SEQF6608.2|AGGM01000159.1_1_SPACER1;Parent=SEQF6608.2|AGGM01000159.1_1;Note=ACTGCTGAAAACAGTTCGGTGTTTTTCATTTCATTGAATGCCCCATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	direct_repeat	753	775	23	+	.	ID=SEQF6608.2|AGGM01000159.1_1_REPEAT2;Parent=SEQF6608.2|AGGM01000159.1_1;Note=CCTTGTAAGGGGACGGAAACGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	binding_site	776	822	47	+	.	ID=SEQF6608.2|AGGM01000159.1_1_SPACER2;Parent=SEQF6608.2|AGGM01000159.1_1;Note=TCATCGTTAGGTTTAACCTTTGTATGAGACAATTGAATGCCCCATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	direct_repeat	823	845	23	+	.	ID=SEQF6608.2|AGGM01000159.1_1_REPEAT3;Parent=SEQF6608.2|AGGM01000159.1_1;Note=CCTCGTAAGGGGACGGAAACTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	binding_site	846	892	47	+	.	ID=SEQF6608.2|AGGM01000159.1_1_SPACER3;Parent=SEQF6608.2|AGGM01000159.1_1;Note=TCAGTGTCCGGGTCATAGATTTTTCCGTCAAATTGAAAGCCCCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	direct_repeat	893	915	23	+	.	ID=SEQF6608.2|AGGM01000159.1_1_REPEAT4;Parent=SEQF6608.2|AGGM01000159.1_1;Note=CTTCGTAAGGGGACGGAAACAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	binding_site	916	963	48	+	.	ID=SEQF6608.2|AGGM01000159.1_1_SPACER4;Parent=SEQF6608.2|AGGM01000159.1_1;Note=AATTCTTCATGGTCTTTATCACTCATCTCATGATTGAATGCCCCATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	direct_repeat	964	986	23	+	.	ID=SEQF6608.2|AGGM01000159.1_1_REPEAT5;Parent=SEQF6608.2|AGGM01000159.1_1;Note=CCTCGTAAGGGGACGGAAACAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	binding_site	987	1034	48	+	.	ID=SEQF6608.2|AGGM01000159.1_1_SPACER5;Parent=SEQF6608.2|AGGM01000159.1_1;Note=CCAACAAACGTTCCATGTTCTGTCATACCTTTATTGAAAGCCCCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	direct_repeat	1035	1057	23	+	.	ID=SEQF6608.2|AGGM01000159.1_1_REPEAT6;Parent=SEQF6608.2|AGGM01000159.1_1;Note=CCTCGTAAGGGGACGGAAACCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	binding_site	1058	1106	49	+	.	ID=SEQF6608.2|AGGM01000159.1_1_SPACER6;Parent=SEQF6608.2|AGGM01000159.1_1;Note=TGCCAGCCTTTTGACTGGCTCCTTTCTTTATCTATTGAATGCCCCGTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	direct_repeat	1107	1129	23	+	.	ID=SEQF6608.2|AGGM01000159.1_1_REPEAT7;Parent=SEQF6608.2|AGGM01000159.1_1;Note=CCTCGTAAGGGGACGGAAACCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	binding_site	1130	1178	49	+	.	ID=SEQF6608.2|AGGM01000159.1_1_SPACER7;Parent=SEQF6608.2|AGGM01000159.1_1;Note=ATAGTTCATCATGTAAGGGACTCGTCTTAGACCATTGAAAGCCCCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	direct_repeat	1179	1201	23	+	.	ID=SEQF6608.2|AGGM01000159.1_1_REPEAT8;Parent=SEQF6608.2|AGGM01000159.1_1;Note=CCTCGTAAGGGGACGGAAACGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	binding_site	1202	1249	48	+	.	ID=SEQF6608.2|AGGM01000159.1_1_SPACER8;Parent=SEQF6608.2|AGGM01000159.1_1;Note=TTGATGTAGGTTGCGATTGGTGAGATGTAGCGATTGAATGCCCCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	direct_repeat	1250	1272	23	+	.	ID=SEQF6608.2|AGGM01000159.1_1_REPEAT9;Parent=SEQF6608.2|AGGM01000159.1_1;Note=CCTCGTAAGGGGACGGAAACGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	binding_site	1273	1321	49	+	.	ID=SEQF6608.2|AGGM01000159.1_1_SPACER9;Parent=SEQF6608.2|AGGM01000159.1_1;Note=AAGGCTTTTTTGTGGTCCTCAACAGCTTCTAGGATTGAATACCCCATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	direct_repeat	1322	1344	23	+	.	ID=SEQF6608.2|AGGM01000159.1_1_REPEAT10;Parent=SEQF6608.2|AGGM01000159.1_1;Note=CCTCGTAAGGGGACGGAAACTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	binding_site	1345	1393	49	+	.	ID=SEQF6608.2|AGGM01000159.1_1_SPACER10;Parent=SEQF6608.2|AGGM01000159.1_1;Note=ACCTTGGCCAATCTTATGTTAGCCCCTTTCCTTATTGAATACCCCATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	direct_repeat	1394	1416	23	+	.	ID=SEQF6608.2|AGGM01000159.1_1_REPEAT11;Parent=SEQF6608.2|AGGM01000159.1_1;Note=CCTCGTAAGGGGACGGAAACTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	binding_site	1417	1465	49	+	.	ID=SEQF6608.2|AGGM01000159.1_1_SPACER11;Parent=SEQF6608.2|AGGM01000159.1_1;Note=ATTAAAGATAGCCGTCACTTCTTCGGTTTGTTTATTGAATGCCCCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	direct_repeat	1466	1488	23	+	.	ID=SEQF6608.2|AGGM01000159.1_1_REPEAT12;Parent=SEQF6608.2|AGGM01000159.1_1;Note=CCTCGTAAGGGGACGGAAACTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	binding_site	1489	1536	48	+	.	ID=SEQF6608.2|AGGM01000159.1_1_SPACER12;Parent=SEQF6608.2|AGGM01000159.1_1;Note=TCATTCATAGGTTGACCGTTCGTTAGTCGTTGATTGAATGTCCCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	direct_repeat	1537	1559	23	+	.	ID=SEQF6608.2|AGGM01000159.1_1_REPEAT13;Parent=SEQF6608.2|AGGM01000159.1_1;Note=CCTCGTAAGGGGGCGGAAACATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	binding_site	1560	1607	48	+	.	ID=SEQF6608.2|AGGM01000159.1_1_SPACER13;Parent=SEQF6608.2|AGGM01000159.1_1;Note=AAAACTTCGCCTCGTCGGTCAACTAGTTCATCATTGAAATCCTCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	direct_repeat	1608	1630	23	+	.	ID=SEQF6608.2|AGGM01000159.1_1_REPEAT14;Parent=SEQF6608.2|AGGM01000159.1_1;Note=CCTCGTAAGGGGACGGAAACTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	binding_site	1631	1680	50	+	.	ID=SEQF6608.2|AGGM01000159.1_1_SPACER14;Parent=SEQF6608.2|AGGM01000159.1_1;Note=AGAGTTAAGGCCTTGTCGCCTCTACGAACCAAGAATTGAATGCCCCATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000159.1	CCTyper	direct_repeat	1681	1703	23	+	.	ID=SEQF6608.2|AGGM01000159.1_1_REPEAT15;Parent=SEQF6608.2|AGGM01000159.1_1;Note=CCTCGTAAGGGGACAGAAATTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6608.2|AGGM01000030.1	CCTyper	OPERON	9165	13427	4263	-	.	ID=SEQF6608.2|AGGM01000030.1@1;Genome_ID=SEQF6608.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=80%;Complete_Adaptation=NA;Best_type=III-A;Best_score=13.0;Genes=Csm6_1_CAS-III,Csm5gr7_0_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_7_CAS-III-A;Positions=5,6,7,8,9;E-values=4.70e-77,1.90e-31,2.50e-36,3.60e-72,3.50e-23;CoverageSeq=0.834,0.808,0.983,0.923,0.911;CoverageHMM=0.956,0.792,0.975,0.986,0.982;Strand_Interference=-1;Strand_Adaptation=NA
SEQF6608.2|AGGM01000030.1	CCTyper	CDS	13059	13427	123	-	.	ID=SEQF6608.2|AGGM01000030.1_9_cas;Genome_ID=SEQF6608.2;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=-;E-value=3.5e-23;Score=79.7;Coverage_Seq=0.9105691056910569;Coverage_Hmm=0.9818181818181818
SEQF6608.2|AGGM01000030.1	CCTyper	CDS	12397	13062	222	-	.	ID=SEQF6608.2|AGGM01000030.1_8_cas;Genome_ID=SEQF6608.2;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=3.6e-72;Score=239.6;Coverage_Seq=0.9234234234234234;Coverage_Hmm=0.986046511627907
SEQF6608.2|AGGM01000030.1	CCTyper	CDS	11496	12395	300	-	.	ID=SEQF6608.2|AGGM01000030.1_7_cas;Genome_ID=SEQF6608.2;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=2.5e-36;Score=122.4;Coverage_Seq=0.9833333333333333;Coverage_Hmm=0.9746031746031746
SEQF6608.2|AGGM01000030.1	CCTyper	CDS	10448	11494	349	-	.	ID=SEQF6608.2|AGGM01000030.1_6_cas;Genome_ID=SEQF6608.2;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=-;E-value=1.9e-31;Score=106.6;Coverage_Seq=0.8080229226361032;Coverage_Hmm=0.7917808219178082
SEQF6608.2|AGGM01000030.1	CCTyper	CDS	9165	10451	429	-	.	ID=SEQF6608.2|AGGM01000030.1_5_cas;Genome_ID=SEQF6608.2;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=-;E-value=4.7e-77;Score=256.2;Coverage_Seq=0.8344988344988346;Coverage_Hmm=0.9555555555555556