SEQF6616.2|AGHG01000220.1	CCTyper	repeat_region	37	287	251	+	.	ID=SEQF6616.2|AGHG01000220.1_1;Genome_ID=SEQF6616.2;Note=Predictor:CCtyper;Start:37;End:287;Consensus_Repeat:GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Number_of_Repeats:4;Repeat_Length:36;Average_Spacer_Length:35.7;Repeat_Identity:100.0;Spacer_Identity:39.0;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.971;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6616.2|AGHG01000220.1	CCTyper	direct_repeat	37	72	36	+	.	ID=SEQF6616.2|AGHG01000220.1_1_REPEAT1;Parent=SEQF6616.2|AGHG01000220.1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6616.2|AGHG01000220.1	CCTyper	binding_site	73	108	36	+	.	ID=SEQF6616.2|AGHG01000220.1_1_SPACER1;Parent=SEQF6616.2|AGHG01000220.1_1;Note=AACAGGCGCTTTACCTTTAATGATGCCCAGACTATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6616.2|AGHG01000220.1	CCTyper	direct_repeat	109	144	36	+	.	ID=SEQF6616.2|AGHG01000220.1_1_REPEAT2;Parent=SEQF6616.2|AGHG01000220.1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6616.2|AGHG01000220.1	CCTyper	binding_site	145	180	36	+	.	ID=SEQF6616.2|AGHG01000220.1_1_SPACER2;Parent=SEQF6616.2|AGHG01000220.1_1;Note=TGATGAATTTATGGATGCTGATTTTTTTGACCTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6616.2|AGHG01000220.1	CCTyper	direct_repeat	181	216	36	+	.	ID=SEQF6616.2|AGHG01000220.1_1_REPEAT3;Parent=SEQF6616.2|AGHG01000220.1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6616.2|AGHG01000220.1	CCTyper	binding_site	217	251	35	+	.	ID=SEQF6616.2|AGHG01000220.1_1_SPACER3;Parent=SEQF6616.2|AGHG01000220.1_1;Note=CAAGCCAAGACAGATGAAGAAAAAGCAACCGTACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6616.2|AGHG01000220.1	CCTyper	direct_repeat	252	287	36	+	.	ID=SEQF6616.2|AGHG01000220.1_1_REPEAT4;Parent=SEQF6616.2|AGHG01000220.1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6616.2|AGHG01000077.1	CCTyper	OPERON	443	7716	7274	+	.	ID=SEQF6616.2|AGHG01000077.1@1;Genome_ID=SEQF6616.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=16.0;Genes=Cas6_0_CAS-I-II-III-IV-V-VI,Cas10_1_CAS-III,Csm2gr11_7_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm5gr7_0_CAS-III-A-III-D,Csm6_1_CAS-III;Positions=1,2,3,4,5,6,7;E-values=3.10e-27,2.10e-186,3.70e-23,3.80e-72,2.60e-36,2.00e-31,4.50e-77;CoverageSeq=0.751,0.819,0.911,0.923,0.89,0.808,0.834;CoverageHMM=0.856,0.997,0.982,0.986,0.819,0.792,0.956;Strand_Interference=1;Strand_Adaptation=NA
SEQF6616.2|AGHG01000077.1	CCTyper	CDS	1158	3473	772	+	.	ID=SEQF6616.2|AGHG01000077.1_2_cas;Genome_ID=SEQF6616.2;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=2.1e-186;Score=618.4;Coverage_Seq=0.8186528497409327;Coverage_Hmm=0.9969418960244648
SEQF6616.2|AGHG01000077.1	CCTyper	CDS	443	1165	241	+	.	ID=SEQF6616.2|AGHG01000077.1_1_cas;Genome_ID=SEQF6616.2;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.1000000000000002e-27;Score=93.3;Coverage_Seq=0.7510373443983402;Coverage_Hmm=0.8556701030927835
SEQF6616.2|AGHG01000077.1	CCTyper	CDS	3454	3822	123	+	.	ID=SEQF6616.2|AGHG01000077.1_3_cas;Genome_ID=SEQF6616.2;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=+;E-value=3.7e-23;Score=79.7;Coverage_Seq=0.9105691056910569;Coverage_Hmm=0.9818181818181818
SEQF6616.2|AGHG01000077.1	CCTyper	CDS	3819	4484	222	+	.	ID=SEQF6616.2|AGHG01000077.1_4_cas;Genome_ID=SEQF6616.2;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=3.8e-72;Score=239.6;Coverage_Seq=0.9234234234234234;Coverage_Hmm=0.986046511627907
SEQF6616.2|AGHG01000077.1	CCTyper	CDS	4486	5385	300	+	.	ID=SEQF6616.2|AGHG01000077.1_5_cas;Genome_ID=SEQF6616.2;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=+;E-value=2.6e-36;Score=122.4;Coverage_Seq=0.89;Coverage_Hmm=0.819047619047619
SEQF6616.2|AGHG01000077.1	CCTyper	CDS	5387	6433	349	+	.	ID=SEQF6616.2|AGHG01000077.1_6_cas;Genome_ID=SEQF6616.2;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=+;E-value=2e-31;Score=106.6;Coverage_Seq=0.8080229226361032;Coverage_Hmm=0.7917808219178082
SEQF6616.2|AGHG01000077.1	CCTyper	CDS	6430	7716	429	+	.	ID=SEQF6616.2|AGHG01000077.1_7_cas;Genome_ID=SEQF6616.2;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=4.5e-77;Score=256.4;Coverage_Seq=0.8344988344988346;Coverage_Hmm=0.9555555555555556