SEQF6617.2|AGGT01000165.1	CCTyper	repeat_region	778	1167	390	+	.	ID=SEQF6617.2|AGGT01000165.1_1;Genome_ID=SEQF6617.2;Note=Predictor:CCtyper;Start:778;End:1167;Consensus_Repeat:ATTGAATGTCCCATACCCTCGTAAGGGGACGGAAAC;Number_of_Repeats:6;Repeat_Length:36;Average_Spacer_Length:34.8;Repeat_Identity:92.0;Spacer_Identity:42.5;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:III-D;Subtype_Probability:0.444;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6617.2|AGGT01000165.1	CCTyper	direct_repeat	778	813	36	+	.	ID=SEQF6617.2|AGGT01000165.1_1_REPEAT1;Parent=SEQF6617.2|AGGT01000165.1_1;Note=ATTGAATGTCCCATACCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6617.2|AGGT01000165.1	CCTyper	binding_site	814	847	34	+	.	ID=SEQF6617.2|AGGT01000165.1_1_SPACER1;Parent=SEQF6617.2|AGGT01000165.1_1;Note=TGGAAAACAGTTCCCCAACAACCCGTGAGTGTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6617.2|AGGT01000165.1	CCTyper	direct_repeat	848	883	36	+	.	ID=SEQF6617.2|AGGT01000165.1_1_REPEAT2;Parent=SEQF6617.2|AGGT01000165.1_1;Note=ATTGAATGTCCCATACCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6617.2|AGGT01000165.1	CCTyper	binding_site	884	917	34	+	.	ID=SEQF6617.2|AGGT01000165.1_1_SPACER2;Parent=SEQF6617.2|AGGT01000165.1_1;Note=TTAAACAGTTGTTTGGTGTAGTAGTCTATAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6617.2|AGGT01000165.1	CCTyper	direct_repeat	918	953	36	+	.	ID=SEQF6617.2|AGGT01000165.1_1_REPEAT3;Parent=SEQF6617.2|AGGT01000165.1_1;Note=ATTGAATGTCCCATACCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6617.2|AGGT01000165.1	CCTyper	binding_site	954	989	36	+	.	ID=SEQF6617.2|AGGT01000165.1_1_SPACER3;Parent=SEQF6617.2|AGGT01000165.1_1;Note=AGAATATGAATCAAAGCATAGATGAATCGTCTAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6617.2|AGGT01000165.1	CCTyper	direct_repeat	990	1025	36	+	.	ID=SEQF6617.2|AGGT01000165.1_1_REPEAT4;Parent=SEQF6617.2|AGGT01000165.1_1;Note=ATTGAATGTCCCATAGCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6617.2|AGGT01000165.1	CCTyper	binding_site	1026	1060	35	+	.	ID=SEQF6617.2|AGGT01000165.1_1_SPACER4;Parent=SEQF6617.2|AGGT01000165.1_1;Note=GGGTCTGCGATAGCATCATTGAAGATGAAGTCTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6617.2|AGGT01000165.1	CCTyper	direct_repeat	1061	1096	36	+	.	ID=SEQF6617.2|AGGT01000165.1_1_REPEAT5;Parent=SEQF6617.2|AGGT01000165.1_1;Note=ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6617.2|AGGT01000165.1	CCTyper	binding_site	1097	1131	35	+	.	ID=SEQF6617.2|AGGT01000165.1_1_SPACER5;Parent=SEQF6617.2|AGGT01000165.1_1;Note=GAAGCGTTCATTTGCATTAGGTTAGGTTTAACATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6617.2|AGGT01000165.1	CCTyper	direct_repeat	1132	1167	36	+	.	ID=SEQF6617.2|AGGT01000165.1_1_REPEAT6;Parent=SEQF6617.2|AGGT01000165.1_1;Note=ATTGAATGCCCCATACCCTCGTAAGGGGACAGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6617.2|AGGT01000071.1	CCTyper	OPERON	4985	8855	3871	-	.	ID=SEQF6617.2|AGGT01000071.1@1;Genome_ID=SEQF6617.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=60%;Complete_Adaptation=NA;Best_type=III-A;Best_score=9.0;Genes=Csm6_1_CAS-III,Csm5gr7_0_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D;Positions=3,4,5,6;E-values=1.90e-77,9.60e-32,2.50e-36,5.40e-70;CoverageSeq=0.834,0.822,0.983,0.939;CoverageHMM=0.956,0.811,0.975,0.963;Strand_Interference=-1;Strand_Adaptation=NA
SEQF6617.2|AGGT01000165.1	CCTyper	OPERON	1	4773	4773	+	.	ID=SEQF6617.2|AGGT01000165.1@1;Genome_ID=SEQF6617.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=40%;Complete_Adaptation=NA;Best_type=III-A;Best_score=9.0;Genes=Cas1_0_CAS-I-II-III-IV-V-VI,Cas2_2_CAS-I-II-III-IV-V-VI,Cas6_0_CAS-I-II-III-IV-V-VI,Cas10_1_CAS-III,Csm2gr11_7_CAS-III-A;Positions=1,2,3,4,5;E-values=2.40e-20,7.00e-21,7.30e-27,5.60e-185,4.00e-23;CoverageSeq=0.87,0.636,0.751,0.818,0.911;CoverageHMM=0.309,0.873,0.856,0.997,0.982;Strand_Interference=1;Strand_Adaptation=NA
SEQF6617.2|AGGT01000165.1	CCTyper	CDS	2103	4424	774	+	.	ID=SEQF6617.2|AGGT01000165.1_4_cas;Genome_ID=SEQF6617.2;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=5.6e-185;Score=613.7;Coverage_Seq=0.8178294573643411;Coverage_Hmm=0.9969418960244648
SEQF6617.2|AGGT01000165.1	CCTyper	CDS	1	345	115	+	.	ID=SEQF6617.2|AGGT01000165.1_1_cas;Genome_ID=SEQF6617.2;Feature_type=CDS;Product=Cas Prediction : Cas1_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.4e-20;Score=70.0;Coverage_Seq=0.8695652173913043;Coverage_Hmm=0.30914826498422715
SEQF6617.2|AGGT01000165.1	CCTyper	CDS	350	679	110	+	.	ID=SEQF6617.2|AGGT01000165.1_2_cas;Genome_ID=SEQF6617.2;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=7e-21;Score=71.4;Coverage_Seq=0.6363636363636364;Coverage_Hmm=0.8734177215189873
SEQF6617.2|AGGT01000165.1	CCTyper	CDS	1388	2110	241	+	.	ID=SEQF6617.2|AGGT01000165.1_3_cas;Genome_ID=SEQF6617.2;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=7.300000000000001e-27;Score=92.2;Coverage_Seq=0.7510373443983402;Coverage_Hmm=0.8556701030927835
SEQF6617.2|AGGT01000165.1	CCTyper	CDS	4405	4773	123	+	.	ID=SEQF6617.2|AGGT01000165.1_5_cas;Genome_ID=SEQF6617.2;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=+;E-value=4.0000000000000004e-23;Score=79.7;Coverage_Seq=0.9105691056910569;Coverage_Hmm=0.9818181818181818
SEQF6617.2|AGGT01000071.1	CCTyper	CDS	8217	8855	213	-	.	ID=SEQF6617.2|AGGT01000071.1_6_cas;Genome_ID=SEQF6617.2;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=5.3999999999999996e-70;Score=232.7;Coverage_Seq=0.9389671361502347;Coverage_Hmm=0.9627906976744186
SEQF6617.2|AGGT01000071.1	CCTyper	CDS	7316	8215	300	-	.	ID=SEQF6617.2|AGGT01000071.1_5_cas;Genome_ID=SEQF6617.2;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=2.5e-36;Score=122.6;Coverage_Seq=0.9833333333333333;Coverage_Hmm=0.9746031746031746
SEQF6617.2|AGGT01000071.1	CCTyper	CDS	6268	7314	349	-	.	ID=SEQF6617.2|AGGT01000071.1_4_cas;Genome_ID=SEQF6617.2;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=-;E-value=9.6e-32;Score=107.7;Coverage_Seq=0.8223495702005731;Coverage_Hmm=0.810958904109589
SEQF6617.2|AGGT01000071.1	CCTyper	CDS	4985	6271	429	-	.	ID=SEQF6617.2|AGGT01000071.1_3_cas;Genome_ID=SEQF6617.2;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=-;E-value=1.9e-77;Score=257.8;Coverage_Seq=0.8344988344988346;Coverage_Hmm=0.9555555555555556