SEQF6619.2|AGHF01000004.1	CCTyper	repeat_region	4078	4431	354	+	.	ID=SEQF6619.2|AGHF01000004.1_1;Genome_ID=SEQF6619.2;Note=Predictor:CCtyper;Start:4078;End:4431;Consensus_Repeat:TTCGAAACAACACAGCTCTAAAAC;Number_of_Repeats:6;Repeat_Length:24;Average_Spacer_Length:42;Repeat_Identity:94.9;Spacer_Identity:52.5;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.472;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6619.2|AGHF01000004.1	CCTyper	direct_repeat	4078	4101	24	+	.	ID=SEQF6619.2|AGHF01000004.1_1_REPEAT1;Parent=SEQF6619.2|AGHF01000004.1_1;Note=TTTATAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6619.2|AGHF01000004.1	CCTyper	binding_site	4102	4143	42	+	.	ID=SEQF6619.2|AGHF01000004.1_1_SPACER1;Parent=SEQF6619.2|AGHF01000004.1_1;Note=AGTGCCCAGGGCAAATCCCTCGTTTAACCTGTTTTGGAACCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6619.2|AGHF01000004.1	CCTyper	direct_repeat	4144	4167	24	+	.	ID=SEQF6619.2|AGHF01000004.1_1_REPEAT2;Parent=SEQF6619.2|AGHF01000004.1_1;Note=TTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6619.2|AGHF01000004.1	CCTyper	binding_site	4168	4209	42	+	.	ID=SEQF6619.2|AGHF01000004.1_1_SPACER2;Parent=SEQF6619.2|AGHF01000004.1_1;Note=TACACTAGCCTAAAACCGTATTTGGCTAGCGTTTTGGAACCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6619.2|AGHF01000004.1	CCTyper	direct_repeat	4210	4233	24	+	.	ID=SEQF6619.2|AGHF01000004.1_1_REPEAT3;Parent=SEQF6619.2|AGHF01000004.1_1;Note=TTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6619.2|AGHF01000004.1	CCTyper	binding_site	4234	4275	42	+	.	ID=SEQF6619.2|AGHF01000004.1_1_SPACER3;Parent=SEQF6619.2|AGHF01000004.1_1;Note=CAGCTGCTTGGTGATCAACGTGGATTGTTTGTTTTGGAACCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6619.2|AGHF01000004.1	CCTyper	direct_repeat	4276	4299	24	+	.	ID=SEQF6619.2|AGHF01000004.1_1_REPEAT4;Parent=SEQF6619.2|AGHF01000004.1_1;Note=TTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6619.2|AGHF01000004.1	CCTyper	binding_site	4300	4341	42	+	.	ID=SEQF6619.2|AGHF01000004.1_1_SPACER4;Parent=SEQF6619.2|AGHF01000004.1_1;Note=TCCTTCAAGGTACTGATGACCGACTGGAAAGTTTTGGAACCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6619.2|AGHF01000004.1	CCTyper	direct_repeat	4342	4365	24	+	.	ID=SEQF6619.2|AGHF01000004.1_1_REPEAT5;Parent=SEQF6619.2|AGHF01000004.1_1;Note=TTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6619.2|AGHF01000004.1	CCTyper	binding_site	4366	4407	42	+	.	ID=SEQF6619.2|AGHF01000004.1_1_SPACER5;Parent=SEQF6619.2|AGHF01000004.1_1;Note=TTAACAATCTTCAAATTCTCAATATTGTCGGTTTTGGAACCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6619.2|AGHF01000004.1	CCTyper	direct_repeat	4408	4431	24	+	.	ID=SEQF6619.2|AGHF01000004.1_1_REPEAT6;Parent=SEQF6619.2|AGHF01000004.1_1;Note=TTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6619.2|AGHF01000004.1	CCTyper	OPERON	2257	14294	12038	-	.	ID=SEQF6619.2|AGHF01000004.1@1;Genome_ID=SEQF6619.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-C;Best_score=8.0;Genes=CasR_1_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_CAS-II-C,Csa3_1_CAS-I-II-III-IV-V-VI;Positions=3,6,7,8,9,13;E-values=8.40e-06,2.10e-100,1.30e-51,3.10e-102,0.00e+00,5.60e-17;CoverageSeq=0.468,0.964,0.957,0.931,0.999,0.8;CoverageHMM=0.339,0.991,0.974,0.996,1.0,0.737;Strand_Interference=-1;Strand_Adaptation=-1
SEQF6619.2|AGHF01000004.1	CCTyper	CDS	5688	6554	289	-	.	ID=SEQF6619.2|AGHF01000004.1_8_cas;Genome_ID=SEQF6619.2;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.1e-102;Score=338.4;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF6619.2|AGHF01000004.1	CCTyper	CDS	5347	5691	115	-	.	ID=SEQF6619.2|AGHF01000004.1_7_cas;Genome_ID=SEQF6619.2;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.3e-51;Score=170.7;Coverage_Seq=0.9565217391304348;Coverage_Hmm=0.9741379310344828
SEQF6619.2|AGHF01000004.1	CCTyper	CDS	6554	10894	1447	-	.	ID=SEQF6619.2|AGHF01000004.1_9_cas;Genome_ID=SEQF6619.2;Feature_type=CDS;Product=Cas Prediction : Cas9_1_CAS-II-C;coding_strand=-;E-value=0.0;Score=1113.4;Coverage_Seq=0.9993089149965446;Coverage_Hmm=1.0
SEQF6619.2|AGHF01000004.1	CCTyper	CDS	2257	2724	156	-	.	ID=SEQF6619.2|AGHF01000004.1_3_cas;Genome_ID=SEQF6619.2;Feature_type=CDS;Product=Cas Prediction : CasR_1_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.4e-06;Score=22.1;Coverage_Seq=0.46794871794871795;Coverage_Hmm=0.3394495412844037
SEQF6619.2|AGHF01000004.1	CCTyper	CDS	13995	14294	100	+	.	ID=SEQF6619.2|AGHF01000004.1_13_cas;Genome_ID=SEQF6619.2;Feature_type=CDS;Product=Cas Prediction : Csa3_1_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=5.6e-17;Score=59.2;Coverage_Seq=0.8;Coverage_Hmm=0.7372881355932204
SEQF6619.2|AGHF01000004.1	CCTyper	CDS	4686	5357	224	-	.	ID=SEQF6619.2|AGHF01000004.1_6_cas;Genome_ID=SEQF6619.2;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=2.1e-100;Score=331.9;Coverage_Seq=0.9642857142857143;Coverage_Hmm=0.9908256880733946