SEQF6634.1|FMMM01000068.1	CCTyper	repeat_region	4423	5115	693	+	.	ID=SEQF6634.1|FMMM01000068.1_1;Genome_ID=SEQF6634.1;Note=Predictor:CCtyper;Start:4423;End:5115;Consensus_Repeat:CTTTTAATCGGACTATCATAGAATTGAAAC;Number_of_Repeats:11;Repeat_Length:30;Average_Spacer_Length:36.3;Repeat_Identity:97.5;Spacer_Identity:42.4;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-A;Subtype_Probability:0.711;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	direct_repeat	4423	4452	30	+	.	ID=SEQF6634.1|FMMM01000068.1_1_REPEAT1;Parent=SEQF6634.1|FMMM01000068.1_1;Note=CTTTTAATCGGACTATCATAGAATTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	binding_site	4453	4487	35	+	.	ID=SEQF6634.1|FMMM01000068.1_1_SPACER1;Parent=SEQF6634.1|FMMM01000068.1_1;Note=CAAGTATGTAGCGAAACAAAGGAAAATTGCCGTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	direct_repeat	4488	4517	30	+	.	ID=SEQF6634.1|FMMM01000068.1_1_REPEAT2;Parent=SEQF6634.1|FMMM01000068.1_1;Note=CTTTTAATCGGACTATCATAGAATTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	binding_site	4518	4555	38	+	.	ID=SEQF6634.1|FMMM01000068.1_1_SPACER2;Parent=SEQF6634.1|FMMM01000068.1_1;Note=AAGAGCACTTCCCACTTCCCGTAGTCGGCATTCATATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	direct_repeat	4556	4585	30	+	.	ID=SEQF6634.1|FMMM01000068.1_1_REPEAT3;Parent=SEQF6634.1|FMMM01000068.1_1;Note=CTTTTAATCGGACTATCATAGAATTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	binding_site	4586	4621	36	+	.	ID=SEQF6634.1|FMMM01000068.1_1_SPACER3;Parent=SEQF6634.1|FMMM01000068.1_1;Note=TGCGGATGTTGATGATATCCCAGTTTCCGAGCGGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	direct_repeat	4622	4651	30	+	.	ID=SEQF6634.1|FMMM01000068.1_1_REPEAT4;Parent=SEQF6634.1|FMMM01000068.1_1;Note=CTTTTAATCGGACTATCATAGAATTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	binding_site	4652	4688	37	+	.	ID=SEQF6634.1|FMMM01000068.1_1_SPACER4;Parent=SEQF6634.1|FMMM01000068.1_1;Note=TTCGGTATATTGCATTTGTGAAGCACCTTCGGAAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	direct_repeat	4689	4718	30	+	.	ID=SEQF6634.1|FMMM01000068.1_1_REPEAT5;Parent=SEQF6634.1|FMMM01000068.1_1;Note=CTTTTAATCGGACTATCATAGAATTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	binding_site	4719	4752	34	+	.	ID=SEQF6634.1|FMMM01000068.1_1_SPACER5;Parent=SEQF6634.1|FMMM01000068.1_1;Note=GTACTGTCCAGAACACCCGCGACGTGTCGTTGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	direct_repeat	4753	4782	30	+	.	ID=SEQF6634.1|FMMM01000068.1_1_REPEAT6;Parent=SEQF6634.1|FMMM01000068.1_1;Note=CTTTTAATCGGACTATCATAGAATTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	binding_site	4783	4818	36	+	.	ID=SEQF6634.1|FMMM01000068.1_1_SPACER6;Parent=SEQF6634.1|FMMM01000068.1_1;Note=CATCAACGCGATGCATCTTAGCATCGTCAAGTACGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	direct_repeat	4819	4848	30	+	.	ID=SEQF6634.1|FMMM01000068.1_1_REPEAT7;Parent=SEQF6634.1|FMMM01000068.1_1;Note=CTTTTAATCGGACTATCATAGAATTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	binding_site	4849	4885	37	+	.	ID=SEQF6634.1|FMMM01000068.1_1_SPACER7;Parent=SEQF6634.1|FMMM01000068.1_1;Note=ATGTGGTATGCGATGCGGCACGGCGAATTGAAGGCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	direct_repeat	4886	4915	30	+	.	ID=SEQF6634.1|FMMM01000068.1_1_REPEAT8;Parent=SEQF6634.1|FMMM01000068.1_1;Note=CTTTTAATCGGACTATCATAGAATTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	binding_site	4916	4954	39	+	.	ID=SEQF6634.1|FMMM01000068.1_1_SPACER8;Parent=SEQF6634.1|FMMM01000068.1_1;Note=CCATTACCGCGCGGGCGGCGATGCAGGAAAACCCGGCCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	direct_repeat	4955	4984	30	+	.	ID=SEQF6634.1|FMMM01000068.1_1_REPEAT9;Parent=SEQF6634.1|FMMM01000068.1_1;Note=CTTTTAATCGGACTATCATAGAATTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	binding_site	4985	5019	35	+	.	ID=SEQF6634.1|FMMM01000068.1_1_SPACER9;Parent=SEQF6634.1|FMMM01000068.1_1;Note=TCGCGAAACGTACAAGTATAGCACGTCCGTGTACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	direct_repeat	5020	5049	30	+	.	ID=SEQF6634.1|FMMM01000068.1_1_REPEAT10;Parent=SEQF6634.1|FMMM01000068.1_1;Note=CTTTTAATCGGACTATCATAGAATTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	binding_site	5050	5085	36	+	.	ID=SEQF6634.1|FMMM01000068.1_1_SPACER10;Parent=SEQF6634.1|FMMM01000068.1_1;Note=CGTTGTAGAAATCGTCTTCGTTGATAACAAGTGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	direct_repeat	5086	5115	30	+	.	ID=SEQF6634.1|FMMM01000068.1_1_REPEAT11;Parent=SEQF6634.1|FMMM01000068.1_1;Note=CTTTTAATCTGACTATCATAGAATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6634.1|FMMM01000068.1	CCTyper	OPERON	468	4210	3743	+	.	ID=SEQF6634.1|FMMM01000068.1@1;Genome_ID=SEQF6634.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=20%;Complete_Adaptation=NA;Best_type=III-A;Best_score=8.0;Genes=Csm5_0_IIIA,Csx1_18_CAS-III,Csx20_1_CAS-I-III,Cas1_6_CAS-I-II-III-IV-V-VI,Cas2_2_CAS-I-II-III-IV-V-VI;Positions=2,3,4,5,6;E-values=2.10e-21,1.10e-78,2.30e-36,1.30e-136,2.70e-27;CoverageSeq=0.964,0.925,0.984,0.979,0.875;CoverageHMM=0.712,1.0,0.976,1.0,0.987;Strand_Interference=1;Strand_Adaptation=NA
SEQF6634.1|FMMM01000067.1	CCTyper	OPERON	246995	260001	13007	+	.	ID=SEQF6634.1|FMMM01000067.1@5;Genome_ID=SEQF6634.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type Hybrid(I-C,III-A);Complete_Interference=['100%', '80%'];Complete_Adaptation=['33%', 'NA'];Best_type=['I-C', 'III-A'];Best_score=16.0;Genes=Cas6_0_I-III,Cas5_1_IC,Cas8c_1_IC,Cas7_1_IC,Cas3_0_CAS-I,Cas4_5_CAS-I-II-III-IV-V-VI,Cas10_1_CAS-III,Csm2gr11_7_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm4gr5_0_CAS-III-A;Positions=203,205,206,207,208,212,213,214,215,216;E-values=2.00e-43,1.80e-139,1.20e-299,2.40e-188,3.90e-101,2.20e-47,4.40e-49,2.80e-14,3.00e-62,4.90e-31;CoverageSeq=0.768,0.959,0.94,0.954,0.491,0.944,0.62,0.701,0.915,0.925;CoverageHMM=0.995,1.0,1.0,1.0,0.994,0.988,0.479,0.964,0.93,0.95;Strand_Interference=1;Strand_Adaptation=1
SEQF6634.1|FMMM01000014.1	CCTyper	OPERON	56367	63807	7441	+	.	ID=SEQF6634.1|FMMM01000014.1@2;Genome_ID=SEQF6634.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-D;Complete_Interference=67%;Complete_Adaptation=NA;Best_type=III-D;Best_score=10.0;Genes=Cas10_7_CAS-III,Csm3gr7_11_CAS-III-A-III-D,Csx10gr5_2_CAS-III-D,Csm3gr7_12_CAS-III-A-III-D,Csx19_9_CAS-III-D,Csm3gr7_4_CAS-III-A-III-D;Positions=44,45,46,47,48,49;E-values=2.90e-113,7.60e-18,4.00e-137,2.40e-37,1.90e-45,6.00e-91;CoverageSeq=0.785,0.91,0.99,0.854,0.977,0.874;CoverageHMM=0.998,0.856,0.998,0.995,0.956,0.942;Strand_Interference=1;Strand_Adaptation=NA
SEQF6634.1|FMMM01000067.1	CCTyper	CDS	256440	257882	481	+	.	ID=SEQF6634.1|FMMM01000067.1_213_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=4.4e-49;Score=164.9;Coverage_Seq=0.6195426195426196;Coverage_Hmm=0.4785932721712538
SEQF6634.1|FMMM01000014.1	CCTyper	CDS	56367	57932	522	+	.	ID=SEQF6634.1|FMMM01000014.1_44_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Cas10_7_CAS-III;coding_strand=+;E-value=2.9e-113;Score=376.2;Coverage_Seq=0.7854406130268199;Coverage_Hmm=0.9975609756097561
SEQF6634.1|FMMM01000068.1	CCTyper	CDS	2931	3947	339	+	.	ID=SEQF6634.1|FMMM01000068.1_5_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Cas1_6_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.3e-136;Score=452.3;Coverage_Seq=0.9793510324483776;Coverage_Hmm=1.0
SEQF6634.1|FMMM01000068.1	CCTyper	CDS	3947	4210	88	+	.	ID=SEQF6634.1|FMMM01000068.1_6_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.7000000000000002e-27;Score=92.2;Coverage_Seq=0.875;Coverage_Hmm=0.9873417721518988
SEQF6634.1|FMMM01000067.1	CCTyper	CDS	251700	253979	760	+	.	ID=SEQF6634.1|FMMM01000067.1_208_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=+;E-value=3.9e-101;Score=336.0;Coverage_Seq=0.49078947368421055;Coverage_Hmm=0.9943342776203966
SEQF6634.1|FMMM01000067.1	CCTyper	CDS	255862	256395	178	+	.	ID=SEQF6634.1|FMMM01000067.1_212_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Cas4_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.1999999999999997e-47;Score=158.5;Coverage_Seq=0.9438202247191011;Coverage_Hmm=0.9875776397515528
SEQF6634.1|FMMM01000067.1	CCTyper	CDS	248511	249236	242	+	.	ID=SEQF6634.1|FMMM01000067.1_205_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Cas5_1_IC;coding_strand=+;E-value=1.8e-139;Score=460.2;Coverage_Seq=0.9586776859504132;Coverage_Hmm=1.0
SEQF6634.1|FMMM01000067.1	CCTyper	CDS	246995	247795	267	+	.	ID=SEQF6634.1|FMMM01000067.1_203_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_I-III;coding_strand=+;E-value=2e-43;Score=146.4;Coverage_Seq=0.7677902621722846;Coverage_Hmm=0.995
SEQF6634.1|FMMM01000067.1	CCTyper	CDS	250790	251707	306	+	.	ID=SEQF6634.1|FMMM01000067.1_207_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_IC;coding_strand=+;E-value=2.4e-188;Score=621.8;Coverage_Seq=0.954248366013072;Coverage_Hmm=1.0
SEQF6634.1|FMMM01000067.1	CCTyper	CDS	249229	250770	514	+	.	ID=SEQF6634.1|FMMM01000067.1_206_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_1_IC;coding_strand=+;E-value=1.1999999999999998e-299;Score=991.0;Coverage_Seq=0.9396887159533074;Coverage_Hmm=1.0
SEQF6634.1|FMMM01000067.1	CCTyper	CDS	257888	258358	157	+	.	ID=SEQF6634.1|FMMM01000067.1_214_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=+;E-value=2.8e-14;Score=51.4;Coverage_Seq=0.7006369426751592;Coverage_Hmm=0.9636363636363636
SEQF6634.1|FMMM01000014.1	CCTyper	CDS	57935	58498	188	+	.	ID=SEQF6634.1|FMMM01000014.1_45_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_11_CAS-III-A-III-D;coding_strand=+;E-value=7.6e-18;Score=62.0;Coverage_Seq=0.9095744680851063;Coverage_Hmm=0.8564814814814815
SEQF6634.1|FMMM01000014.1	CCTyper	CDS	59982	61400	473	+	.	ID=SEQF6634.1|FMMM01000014.1_47_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_12_CAS-III-A-III-D;coding_strand=+;E-value=2.4e-37;Score=126.5;Coverage_Seq=0.854122621564482;Coverage_Hmm=0.9949748743718593
SEQF6634.1|FMMM01000067.1	CCTyper	CDS	258368	259006	213	+	.	ID=SEQF6634.1|FMMM01000067.1_215_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=2.9999999999999997e-62;Score=207.5;Coverage_Seq=0.9154929577464789;Coverage_Hmm=0.9302325581395349
SEQF6634.1|FMMM01000014.1	CCTyper	CDS	61786	63807	674	+	.	ID=SEQF6634.1|FMMM01000014.1_49_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_4_CAS-III-A-III-D;coding_strand=+;E-value=5.999999999999999e-91;Score=303.6;Coverage_Seq=0.8738872403560831;Coverage_Hmm=0.9421875
SEQF6634.1|FMMM01000067.1	CCTyper	CDS	259006	260001	332	+	.	ID=SEQF6634.1|FMMM01000067.1_216_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_0_CAS-III-A;coding_strand=+;E-value=4.899999999999999e-31;Score=105.4;Coverage_Seq=0.9246987951807228;Coverage_Hmm=0.9501661129568106
SEQF6634.1|FMMM01000068.1	CCTyper	CDS	468	1292	275	+	.	ID=SEQF6634.1|FMMM01000068.1_2_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Csm5_0_IIIA;coding_strand=+;E-value=2.1e-21;Score=74.1;Coverage_Seq=0.9636363636363636;Coverage_Hmm=0.7115384615384616
SEQF6634.1|FMMM01000014.1	CCTyper	CDS	58495	59985	497	+	.	ID=SEQF6634.1|FMMM01000014.1_46_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Csx10gr5_2_CAS-III-D;coding_strand=+;E-value=4e-137;Score=454.8;Coverage_Seq=0.9899396378269618;Coverage_Hmm=0.9979253112033195
SEQF6634.1|FMMM01000014.1	CCTyper	CDS	61397	61783	129	+	.	ID=SEQF6634.1|FMMM01000014.1_48_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Csx19_9_CAS-III-D;coding_strand=+;E-value=1.9e-45;Score=151.4;Coverage_Seq=0.9767441860465116;Coverage_Hmm=0.9558823529411765
SEQF6634.1|FMMM01000068.1	CCTyper	CDS	1294	2538	415	+	.	ID=SEQF6634.1|FMMM01000068.1_3_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Csx1_18_CAS-III;coding_strand=+;E-value=1.1e-78;Score=262.8;Coverage_Seq=0.9253012048192771;Coverage_Hmm=1.0
SEQF6634.1|FMMM01000068.1	CCTyper	CDS	2541	2906	122	+	.	ID=SEQF6634.1|FMMM01000068.1_4_cas;Genome_ID=SEQF6634.1;Feature_type=CDS;Product=Cas Prediction : Csx20_1_CAS-I-III;coding_strand=+;E-value=2.3e-36;Score=122.4;Coverage_Seq=0.9836065573770492;Coverage_Hmm=0.976