SEQF6721.1|CP085955.1	CCTyper	repeat_region	993921	994882	962	+	.	ID=SEQF6721.1|CP085955.1_1;Genome_ID=SEQF6721.1;Note=Predictor:CCtyper;Start:993921;End:994882;Consensus_Repeat:GTTTAATACCTATATGAAATTACATCATTCTCAAAC;Number_of_Repeats:15;Repeat_Length:36.0;Average_Spacer_Length:30.1;Repeat_Identity:100.0;Spacer_Identity:42.9;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.966;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	direct_repeat	993921	993956	36	+	.	ID=SEQF6721.1|CP085955.1_1_REPEAT1;Parent=SEQF6721.1|CP085955.1_1;Note=GTTTAATACCTATATGAAATTACATCATTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	binding_site	993957	993986	30	+	.	ID=SEQF6721.1|CP085955.1_1_SPACER1;Parent=SEQF6721.1|CP085955.1_1;Note=TGTCCTCGAACGTCAATCCTAAACTTTCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	direct_repeat	993987	994022	36	+	.	ID=SEQF6721.1|CP085955.1_1_REPEAT2;Parent=SEQF6721.1|CP085955.1_1;Note=GTTTAATACCTATATGAAATTACATCATTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	binding_site	994023	994052	30	+	.	ID=SEQF6721.1|CP085955.1_1_SPACER2;Parent=SEQF6721.1|CP085955.1_1;Note=CAACATACTCAATCTTTTTATGTTTTACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	direct_repeat	994053	994088	36	+	.	ID=SEQF6721.1|CP085955.1_1_REPEAT3;Parent=SEQF6721.1|CP085955.1_1;Note=GTTTAATACCTATATGAAATTACATCATTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	binding_site	994089	994119	31	+	.	ID=SEQF6721.1|CP085955.1_1_SPACER3;Parent=SEQF6721.1|CP085955.1_1;Note=TATAAATTAAGTATTCTTTTAAATTATCATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	direct_repeat	994120	994155	36	+	.	ID=SEQF6721.1|CP085955.1_1_REPEAT4;Parent=SEQF6721.1|CP085955.1_1;Note=GTTTAATACCTATATGAAATTACATCATTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	binding_site	994156	994186	31	+	.	ID=SEQF6721.1|CP085955.1_1_SPACER4;Parent=SEQF6721.1|CP085955.1_1;Note=TATACACTGCTTGCAATTCGTAGTCATCAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	direct_repeat	994187	994222	36	+	.	ID=SEQF6721.1|CP085955.1_1_REPEAT5;Parent=SEQF6721.1|CP085955.1_1;Note=GTTTAATACCTATATGAAATTACATCATTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	binding_site	994223	994252	30	+	.	ID=SEQF6721.1|CP085955.1_1_SPACER5;Parent=SEQF6721.1|CP085955.1_1;Note=TTCACTTCTGCTTTCGGTTTTTTATAACCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	direct_repeat	994253	994288	36	+	.	ID=SEQF6721.1|CP085955.1_1_REPEAT6;Parent=SEQF6721.1|CP085955.1_1;Note=GTTTAATACCTATATGAAATTACATCATTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	binding_site	994289	994318	30	+	.	ID=SEQF6721.1|CP085955.1_1_SPACER6;Parent=SEQF6721.1|CP085955.1_1;Note=CAAGCTTATATTCGGGAGCTTGTAAACAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	direct_repeat	994319	994354	36	+	.	ID=SEQF6721.1|CP085955.1_1_REPEAT7;Parent=SEQF6721.1|CP085955.1_1;Note=GTTTAATACCTATATGAAATTACATCATTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	binding_site	994355	994384	30	+	.	ID=SEQF6721.1|CP085955.1_1_SPACER7;Parent=SEQF6721.1|CP085955.1_1;Note=ATCACTCAAACCATTCAGATTAATCAGTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	direct_repeat	994385	994420	36	+	.	ID=SEQF6721.1|CP085955.1_1_REPEAT8;Parent=SEQF6721.1|CP085955.1_1;Note=GTTTAATACCTATATGAAATTACATCATTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	binding_site	994421	994450	30	+	.	ID=SEQF6721.1|CP085955.1_1_SPACER8;Parent=SEQF6721.1|CP085955.1_1;Note=GGGAACTAAAGATTAAAACAAAAATAGCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	direct_repeat	994451	994486	36	+	.	ID=SEQF6721.1|CP085955.1_1_REPEAT9;Parent=SEQF6721.1|CP085955.1_1;Note=GTTTAATACCTATATGAAATTACATCATTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	binding_site	994487	994516	30	+	.	ID=SEQF6721.1|CP085955.1_1_SPACER9;Parent=SEQF6721.1|CP085955.1_1;Note=TTCAAATGATGAAACAAATCGTGTAGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	direct_repeat	994517	994552	36	+	.	ID=SEQF6721.1|CP085955.1_1_REPEAT10;Parent=SEQF6721.1|CP085955.1_1;Note=GTTTAATACCTATATGAAATTACATCATTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	binding_site	994553	994582	30	+	.	ID=SEQF6721.1|CP085955.1_1_SPACER10;Parent=SEQF6721.1|CP085955.1_1;Note=AAATCAAATCCTTGACCTCATCAAGTTTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	direct_repeat	994583	994618	36	+	.	ID=SEQF6721.1|CP085955.1_1_REPEAT11;Parent=SEQF6721.1|CP085955.1_1;Note=GTTTAATACCTATATGAAATTACATCATTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	binding_site	994619	994648	30	+	.	ID=SEQF6721.1|CP085955.1_1_SPACER11;Parent=SEQF6721.1|CP085955.1_1;Note=AGTAACTGTAATTGTATGTTCACCTAATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	direct_repeat	994649	994684	36	+	.	ID=SEQF6721.1|CP085955.1_1_REPEAT12;Parent=SEQF6721.1|CP085955.1_1;Note=GTTTAATACCTATATGAAATTACATCATTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	binding_site	994685	994714	30	+	.	ID=SEQF6721.1|CP085955.1_1_SPACER12;Parent=SEQF6721.1|CP085955.1_1;Note=CGTCGTTTGGAGTAAATCCAAATTCGTACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	direct_repeat	994715	994750	36	+	.	ID=SEQF6721.1|CP085955.1_1_REPEAT13;Parent=SEQF6721.1|CP085955.1_1;Note=GTTTAATACCTATATGAAATTACATCATTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	binding_site	994751	994780	30	+	.	ID=SEQF6721.1|CP085955.1_1_SPACER13;Parent=SEQF6721.1|CP085955.1_1;Note=GTTCGTACGATACTCCTCATCTCCACCATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	direct_repeat	994781	994816	36	+	.	ID=SEQF6721.1|CP085955.1_1_REPEAT14;Parent=SEQF6721.1|CP085955.1_1;Note=GTTTAATACCTATATGAAATTACATCATTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	binding_site	994817	994846	30	+	.	ID=SEQF6721.1|CP085955.1_1_SPACER14;Parent=SEQF6721.1|CP085955.1_1;Note=GTGTGTGGAAAAGAGTTTGACGAGGATAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085955.1	CCTyper	direct_repeat	994847	994882	36	+	.	ID=SEQF6721.1|CP085955.1_1_REPEAT15;Parent=SEQF6721.1|CP085955.1_1;Note=GTTTAATACCTATATGAAATTACATCATTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085956.1	CCTyper	repeat_region	39372	39516	145	+	.	ID=SEQF6721.1|CP085956.1-2_2;Genome_ID=SEQF6721.1;Note=Predictor:CCtyper;Start:39372;End:39516;Consensus_Repeat:TTACCCGCACATGCGGGGGTGTTCCT;Number_of_Repeats:3;Repeat_Length:25.3;Average_Spacer_Length:34.5;Repeat_Identity:76.6;Spacer_Identity:46.8;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:IV-A1;Subtype_Probability:0.714;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085956.1	CCTyper	direct_repeat	39372	39392	21	+	.	ID=SEQF6721.1|CP085956.1-2_2_REPEAT1;Parent=SEQF6721.1|CP085956.1-2_2;Note=CCCGCACAAGCGGGGGTGTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085956.1	CCTyper	binding_site	39393	39426	34	+	.	ID=SEQF6721.1|CP085956.1-2_2_SPACER1;Parent=SEQF6721.1|CP085956.1-2_2;Note=CTGATTATTTCAAGGAGCGAAAAAAGTATCTATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085956.1	CCTyper	direct_repeat	39427	39455	29	+	.	ID=SEQF6721.1|CP085956.1-2_2_REPEAT2;Parent=SEQF6721.1|CP085956.1-2_2;Note=ATTTTACCCGCACAAGCGGGGGTGTTCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085956.1	CCTyper	binding_site	39456	39490	35	+	.	ID=SEQF6721.1|CP085956.1-2_2_SPACER2;Parent=SEQF6721.1|CP085956.1-2_2;Note=GTTATAAAAAAAGATTATAATTATAACTTTATGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085956.1	CCTyper	direct_repeat	39491	39516	26	+	.	ID=SEQF6721.1|CP085956.1-2_2_REPEAT3;Parent=SEQF6721.1|CP085956.1-2_2;Note=TTACCCGCACATGCGGGGGTGTTCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6721.1|CP085956.1	CCTyper	OPERON	35086	39054	3969	+	.	ID=SEQF6721.1|CP085956.1@2;Genome_ID=SEQF6721.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=67%;Complete_Adaptation=0%;Best_type=I-E;Best_score=14.0;Genes=Cas8e_4_CAS-I-E,Cas7_1_CAS-I-E,Cas5_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI;Positions=51,52,53,54;E-values=5.50e-54,1.10e-106,3.60e-36,2.90e-40;CoverageSeq=0.848,0.942,0.939,0.962;CoverageHMM=0.905,0.992,0.974,0.995;Strand_Interference=1;Strand_Adaptation=NA
SEQF6721.1|CP085955.1	CCTyper	OPERON	992808	1000809	8002	-	.	ID=SEQF6721.1|CP085955.1@16;Genome_ID=SEQF6721.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=PD_DExK_0_CAS-I-II-III-IV-V-VI,Csn2_0_IIA,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_0_II,Cas9_0_II;Positions=943,944,945,946,947;E-values=2.00e-48,5.90e-56,1.10e-33,2.40e-88,2.00e-178;CoverageSeq=0.584,0.981,0.99,0.924,0.829;CoverageHMM=1.0,0.995,1.0,0.996,0.973;Strand_Interference=-1;Strand_Adaptation=-1
SEQF6721.1|CP085956.1	CCTyper	OPERON	105221	106453	1233	+	.	ID=SEQF6721.1|CP085956.1@5;Genome_ID=SEQF6721.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-D;Complete_Interference=100%;Complete_Adaptation=0%;Best_type=II-D;Best_score=4.0;Genes=Cas9_0_II-D;Positions=128;E-values=3.50e-19;CoverageSeq=0.433;CoverageHMM=0.22;Strand_Interference=1;Strand_Adaptation=NA
SEQF6721.1|CP085955.1	CCTyper	CDS	995891	996763	291	-	.	ID=SEQF6721.1|CP085955.1_946_cas;Genome_ID=SEQF6721.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_II;coding_strand=-;E-value=2.4e-88;Score=292.7;Coverage_Seq=0.9243986254295533;Coverage_Hmm=0.9964028776978417
SEQF6721.1|CP085955.1	CCTyper	CDS	995581	995886	102	-	.	ID=SEQF6721.1|CP085955.1_945_cas;Genome_ID=SEQF6721.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.1e-33;Score=112.3;Coverage_Seq=0.9901960784313726;Coverage_Hmm=1.0
SEQF6721.1|CP085956.1	CCTyper	CDS	37732	38418	229	+	.	ID=SEQF6721.1|CP085956.1_53_cas;Genome_ID=SEQF6721.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IE;coding_strand=+;E-value=3.6e-36;Score=121.7;Coverage_Seq=0.9388646288209607;Coverage_Hmm=0.9739130434782609
SEQF6721.1|CP085956.1	CCTyper	CDS	38419	39054	212	+	.	ID=SEQF6721.1|CP085956.1_54_cas;Genome_ID=SEQF6721.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.9e-40;Score=135.5;Coverage_Seq=0.9622641509433962;Coverage_Hmm=0.995049504950495
SEQF6721.1|CP085956.1	CCTyper	CDS	36635	37729	365	+	.	ID=SEQF6721.1|CP085956.1_52_cas;Genome_ID=SEQF6721.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=+;E-value=1.1e-106;Score=354.0;Coverage_Seq=0.9424657534246575;Coverage_Hmm=0.9916434540389972
SEQF6721.1|CP085956.1	CCTyper	CDS	35086	36645	520	+	.	ID=SEQF6721.1|CP085956.1_51_cas;Genome_ID=SEQF6721.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=+;E-value=5.5e-54;Score=180.6;Coverage_Seq=0.8480769230769231;Coverage_Hmm=0.9053763440860215
SEQF6721.1|CP085955.1	CCTyper	CDS	996763	1000809	1349	-	.	ID=SEQF6721.1|CP085955.1_947_cas;Genome_ID=SEQF6721.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=2e-178;Score=592.1;Coverage_Seq=0.8287620459599704;Coverage_Hmm=0.9734939759036144
SEQF6721.1|CP085956.1	CCTyper	CDS	105221	106453	411	+	.	ID=SEQF6721.1|CP085956.1_128_cas;Genome_ID=SEQF6721.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II-D;coding_strand=+;E-value=3.5e-19;Score=65.4;Coverage_Seq=0.43309002433090027;Coverage_Hmm=0.22039859320046892
SEQF6721.1|CP085955.1	CCTyper	CDS	994937	995584	216	-	.	ID=SEQF6721.1|CP085955.1_944_cas;Genome_ID=SEQF6721.1;Feature_type=CDS;Product=Cas Prediction : Csn2_0_IIA;coding_strand=-;E-value=5.9e-56;Score=186.3;Coverage_Seq=0.9814814814814815;Coverage_Hmm=0.9954954954954955
SEQF6721.1|CP085955.1	CCTyper	CDS	992808	993839	344	-	.	ID=SEQF6721.1|CP085955.1_943_cas;Genome_ID=SEQF6721.1;Feature_type=CDS;Product=Cas Prediction : PD_DExK_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2e-48;Score=161.1;Coverage_Seq=0.5843023255813954;Coverage_Hmm=1.0