SEQF6730.1|NDYA01000025.1	CCTyper	repeat_region	49459	50407	949	+	.	ID=SEQF6730.1|NDYA01000025.1_1;Genome_ID=SEQF6730.1;Note=Predictor:CCtyper;Start:49459;End:50407;Consensus_Repeat:TTTACATTCCAATATGGTTAGATTTTAAT;Number_of_Repeats:15;Repeat_Length:29;Average_Spacer_Length:36.7;Repeat_Identity:87.6;Spacer_Identity:44.8;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: I-B;Cas_Subtype_Prediction:I-B;Subtype_Probability:0.986;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	direct_repeat	49459	49487	29	+	.	ID=SEQF6730.1|NDYA01000025.1_1_REPEAT1;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTTACATTCCACTCTGGGTAGATTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	binding_site	49488	49524	37	+	.	ID=SEQF6730.1|NDYA01000025.1_1_SPACER1;Parent=SEQF6730.1|NDYA01000025.1_1;Note=AATAGTTGCGCCAACATACTCAACATTACTAATACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	direct_repeat	49525	49553	29	+	.	ID=SEQF6730.1|NDYA01000025.1_1_REPEAT2;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTTACATTCCACTCTGGGTAGATTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	binding_site	49554	49589	36	+	.	ID=SEQF6730.1|NDYA01000025.1_1_SPACER2;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTACTAGAACTATCTGTAACATAATTGTCAAGATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	direct_repeat	49590	49618	29	+	.	ID=SEQF6730.1|NDYA01000025.1_1_REPEAT3;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTTACATTCCATTCTGGTTAAATTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	binding_site	49619	49655	37	+	.	ID=SEQF6730.1|NDYA01000025.1_1_SPACER3;Parent=SEQF6730.1|NDYA01000025.1_1;Note=CATTTCCTGCTGCTGCTTGATTATCAGGTCTATAGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	direct_repeat	49656	49684	29	+	.	ID=SEQF6730.1|NDYA01000025.1_1_REPEAT4;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTTACATTCCACTCTGGTTAAATTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	binding_site	49685	49723	39	+	.	ID=SEQF6730.1|NDYA01000025.1_1_SPACER4;Parent=SEQF6730.1|NDYA01000025.1_1;Note=GTTATAATAAATCCAGCTCTATCTTCCCTCCTATATGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	direct_repeat	49724	49752	29	+	.	ID=SEQF6730.1|NDYA01000025.1_1_REPEAT5;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTTACATTCCACTCTGGTTAAATTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	binding_site	49753	49789	37	+	.	ID=SEQF6730.1|NDYA01000025.1_1_SPACER5;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TCAAATTGGATCATGGTTTGGAAGTAAATTCAAAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	direct_repeat	49790	49818	29	+	.	ID=SEQF6730.1|NDYA01000025.1_1_REPEAT6;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTTACATTCCACTCTGGTTAAATTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	binding_site	49819	49854	36	+	.	ID=SEQF6730.1|NDYA01000025.1_1_SPACER6;Parent=SEQF6730.1|NDYA01000025.1_1;Note=CCGATTAATTCAAGTCCTTTGTTTACCTCTTTTGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	direct_repeat	49855	49883	29	+	.	ID=SEQF6730.1|NDYA01000025.1_1_REPEAT7;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTTACATTCCAATATGGTTAGATTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	binding_site	49884	49921	38	+	.	ID=SEQF6730.1|NDYA01000025.1_1_SPACER7;Parent=SEQF6730.1|NDYA01000025.1_1;Note=AATGATATGCGGTGTACAAAGATGACAAGTTTGAGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	direct_repeat	49922	49950	29	+	.	ID=SEQF6730.1|NDYA01000025.1_1_REPEAT8;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTTACATTCCAATATGGTTAGATTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	binding_site	49951	49987	37	+	.	ID=SEQF6730.1|NDYA01000025.1_1_SPACER8;Parent=SEQF6730.1|NDYA01000025.1_1;Note=GAGAGGCGAAGAAAAGGAAGAGGTCCTTGTAAATGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	direct_repeat	49988	50016	29	+	.	ID=SEQF6730.1|NDYA01000025.1_1_REPEAT9;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTTACATTCCAATATGGTTAGATTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	binding_site	50017	50054	38	+	.	ID=SEQF6730.1|NDYA01000025.1_1_SPACER9;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TCGCTTTCGCAGTATCCACAGTCAAGTATGCTCCAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	direct_repeat	50055	50083	29	+	.	ID=SEQF6730.1|NDYA01000025.1_1_REPEAT10;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTTACATTCCAATATGGTTAGATTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	binding_site	50084	50118	35	+	.	ID=SEQF6730.1|NDYA01000025.1_1_SPACER10;Parent=SEQF6730.1|NDYA01000025.1_1;Note=CTAATTCTTCAAGTATTTCTGGGAGCTGTTCGAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	direct_repeat	50119	50147	29	+	.	ID=SEQF6730.1|NDYA01000025.1_1_REPEAT11;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTTACATTCCAATATGGTTAGATTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	binding_site	50148	50183	36	+	.	ID=SEQF6730.1|NDYA01000025.1_1_SPACER11;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTCATGAGTGCAGCACATGTGTCACGAGTACTGTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	direct_repeat	50184	50212	29	+	.	ID=SEQF6730.1|NDYA01000025.1_1_REPEAT12;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTTACATTCCAATATAGTTAGATTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	binding_site	50213	50248	36	+	.	ID=SEQF6730.1|NDYA01000025.1_1_SPACER12;Parent=SEQF6730.1|NDYA01000025.1_1;Note=GACAAAAACGCAAAAAGCTTTTTGAATCTAGATACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	direct_repeat	50249	50277	29	+	.	ID=SEQF6730.1|NDYA01000025.1_1_REPEAT13;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTTACATTCCAATATGGTTAGATTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	binding_site	50278	50313	36	+	.	ID=SEQF6730.1|NDYA01000025.1_1_SPACER13;Parent=SEQF6730.1|NDYA01000025.1_1;Note=AATACACGTCCGATGTAGTTTTCTTCGGCGAAAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	direct_repeat	50314	50342	29	+	.	ID=SEQF6730.1|NDYA01000025.1_1_REPEAT14;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTTACATTCCAATATGGTTAGATTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	binding_site	50343	50378	36	+	.	ID=SEQF6730.1|NDYA01000025.1_1_SPACER14;Parent=SEQF6730.1|NDYA01000025.1_1;Note=AGAGCACCTTATAAGTTGATACTCAATTCAACTTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	direct_repeat	50379	50407	29	+	.	ID=SEQF6730.1|NDYA01000025.1_1_REPEAT15;Parent=SEQF6730.1|NDYA01000025.1_1;Note=TTTACATTCCAATATGGTTAGATTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6730.1|NDYA01000025.1	CCTyper	OPERON	50589	61310	10722	-	.	ID=SEQF6730.1|NDYA01000025.1@2;Genome_ID=SEQF6730.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-B;Complete_Interference=80%;Complete_Adaptation=100%;Best_type=I-B;Best_score=18.0;Genes=Cas2_2_CAS-I-II-III-IV-V-VI,Cas1_6_CAS-I-II-III-IV-V-VI,Cas4_5_CAS-I-II-III-IV-V-VI,Cas3_1_CAS-I,Cas5_2_CAS-I-B,Cas7_1_IB,Cas6_7_CAS-I-II-III-IV-V-VI,AbiEii_0_CAS-III;Positions=50,51,52,53,54,55,57,59;E-values=1.40e-27,3.80e-135,6.30e-35,1.90e-70,3.40e-34,9.80e-63,1.60e-28,4.70e-04;CoverageSeq=0.891,0.973,0.923,0.876,0.766,0.946,0.992,0.516;CoverageHMM=0.987,0.994,0.832,0.808,0.933,0.997,0.979,0.408;Strand_Interference=-1;Strand_Adaptation=-1
SEQF6730.1|NDYA01000025.1	CCTyper	CDS	60654	61310	219	-	.	ID=SEQF6730.1|NDYA01000025.1_59_cas;Genome_ID=SEQF6730.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=-;E-value=0.00047;Score=16.4;Coverage_Seq=0.5159817351598174;Coverage_Hmm=0.4084507042253521
SEQF6730.1|NDYA01000025.1	CCTyper	CDS	50867	51859	331	-	.	ID=SEQF6730.1|NDYA01000025.1_51_cas;Genome_ID=SEQF6730.1;Feature_type=CDS;Product=Cas Prediction : Cas1_6_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.7999999999999997e-135;Score=446.8;Coverage_Seq=0.972809667673716;Coverage_Hmm=0.99375
SEQF6730.1|NDYA01000025.1	CCTyper	CDS	50589	50864	92	-	.	ID=SEQF6730.1|NDYA01000025.1_50_cas;Genome_ID=SEQF6730.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.4e-27;Score=92.4;Coverage_Seq=0.8913043478260869;Coverage_Hmm=0.9873417721518988
SEQF6730.1|NDYA01000025.1	CCTyper	CDS	52363	54630	756	-	.	ID=SEQF6730.1|NDYA01000025.1_53_cas;Genome_ID=SEQF6730.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=1.9e-70;Score=234.7;Coverage_Seq=0.8756613756613757;Coverage_Hmm=0.8080536912751678
SEQF6730.1|NDYA01000025.1	CCTyper	CDS	51938	52366	143	-	.	ID=SEQF6730.1|NDYA01000025.1_52_cas;Genome_ID=SEQF6730.1;Feature_type=CDS;Product=Cas Prediction : Cas4_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.299999999999999e-35;Score=117.3;Coverage_Seq=0.9230769230769231;Coverage_Hmm=0.8322981366459627
SEQF6730.1|NDYA01000025.1	CCTyper	CDS	54643	55437	265	-	.	ID=SEQF6730.1|NDYA01000025.1_54_cas;Genome_ID=SEQF6730.1;Feature_type=CDS;Product=Cas Prediction : Cas5_2_CAS-I-B;coding_strand=-;E-value=3.4e-34;Score=115.2;Coverage_Seq=0.7660377358490567;Coverage_Hmm=0.9329896907216495
SEQF6730.1|NDYA01000025.1	CCTyper	CDS	58107	58826	240	-	.	ID=SEQF6730.1|NDYA01000025.1_57_cas;Genome_ID=SEQF6730.1;Feature_type=CDS;Product=Cas Prediction : Cas6_7_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.6000000000000001e-28;Score=96.8;Coverage_Seq=0.9916666666666667;Coverage_Hmm=0.979253112033195
SEQF6730.1|NDYA01000025.1	CCTyper	CDS	55424	56305	294	-	.	ID=SEQF6730.1|NDYA01000025.1_55_cas;Genome_ID=SEQF6730.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_IB;coding_strand=-;E-value=9.8e-63;Score=208.7;Coverage_Seq=0.9455782312925171;Coverage_Hmm=0.9968847352024922