SEQF6866.1|CP012719.1	CCTyper	repeat_region	1350715	1352466	1752	+	.	ID=SEQF6866.1|CP012719.1_1;Genome_ID=SEQF6866.1;Note=Predictor:CCtyper;Start:1350715;End:1352466;Consensus_Repeat:GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Number_of_Repeats:27;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:97.8;Spacer_Identity:41.3;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.798;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1350715	1350750	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT1;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGATCCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1350751	1350780	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER1;Parent=SEQF6866.1|CP012719.1_1;Note=CATTAACTGTATTTGTAAAGTTGGCCGGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1350781	1350816	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT2;Parent=SEQF6866.1|CP012719.1_1;Note=GTTCTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1350817	1350846	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER2;Parent=SEQF6866.1|CP012719.1_1;Note=TAAATTAAGAGAATCGATTCAATCGCTTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1350847	1350882	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT3;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1350883	1350912	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER3;Parent=SEQF6866.1|CP012719.1_1;Note=TATGTATTCCCCACGCGCAAACCGAGTATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1350913	1350948	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT4;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1350949	1350978	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER4;Parent=SEQF6866.1|CP012719.1_1;Note=ACAGCTAGAACAAGCATCTCAATCGCAGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1350979	1351014	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT5;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1351015	1351044	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER5;Parent=SEQF6866.1|CP012719.1_1;Note=ATGCTCAATAAAATTCATAATACATTTCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1351045	1351080	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT6;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1351081	1351110	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER6;Parent=SEQF6866.1|CP012719.1_1;Note=ACCAATGCCTACGTTTTAAGCTACCTTGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1351111	1351146	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT7;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1351147	1351176	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER7;Parent=SEQF6866.1|CP012719.1_1;Note=AGGTAGTAAATGGAATCTAGCAAATAAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1351177	1351212	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT8;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1351213	1351242	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER8;Parent=SEQF6866.1|CP012719.1_1;Note=ATAGACGGCATTTGCTTTCGGTGTCACAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1351243	1351278	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT9;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTTGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1351279	1351308	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER9;Parent=SEQF6866.1|CP012719.1_1;Note=AATCGTGAGCAATTTGCTCTTTGGAAATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1351309	1351344	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT10;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1351345	1351374	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER10;Parent=SEQF6866.1|CP012719.1_1;Note=TTTAGTTATAAATTTCACAACACTATTATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1351375	1351410	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT11;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1351411	1351440	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER11;Parent=SEQF6866.1|CP012719.1_1;Note=TAAAGGTGAGGAAAAGCTCAATCAGGCTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1351441	1351476	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT12;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1351477	1351506	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER12;Parent=SEQF6866.1|CP012719.1_1;Note=AAACAAATTCGATTCTTAGAACAGCGCGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1351507	1351542	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT13;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1351543	1351572	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER13;Parent=SEQF6866.1|CP012719.1_1;Note=TAAGAACTCCTCTTTAAAAATAAAAGGGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1351573	1351608	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT14;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1351609	1351638	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER14;Parent=SEQF6866.1|CP012719.1_1;Note=GCTAAATTCTACAGTCGTACCATCTGGATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1351639	1351674	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT15;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1351675	1351704	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER15;Parent=SEQF6866.1|CP012719.1_1;Note=AATTCATAGCTTTTTTTAGTTCTTTATCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1351705	1351740	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT16;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1351741	1351770	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER16;Parent=SEQF6866.1|CP012719.1_1;Note=AATCTTTAAATCGACTACGTTTTTTATCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1351771	1351806	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT17;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1351807	1351836	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER17;Parent=SEQF6866.1|CP012719.1_1;Note=TTAGATACAGTAAACTTATCTCCACTACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1351837	1351872	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT18;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1351873	1351902	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER18;Parent=SEQF6866.1|CP012719.1_1;Note=AATTCATAGCTTTTTTTAGTTCTTTATCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1351903	1351938	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT19;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1351939	1351968	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER19;Parent=SEQF6866.1|CP012719.1_1;Note=TCGCTAATCTATGATTTCGAATGCTTGCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1351969	1352004	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT20;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1352005	1352034	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER20;Parent=SEQF6866.1|CP012719.1_1;Note=TGCCCTTTTTACTTTCTTCTTCACGCGCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1352035	1352070	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT21;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1352071	1352100	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER21;Parent=SEQF6866.1|CP012719.1_1;Note=ACAATCCTGTCCAGGAATACATGGAAACTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1352101	1352136	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT22;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1352137	1352166	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER22;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTCTTGATGATACTATAATAGCACGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1352167	1352202	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT23;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1352203	1352232	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER23;Parent=SEQF6866.1|CP012719.1_1;Note=CACTACCCAGATAGGTTCTTGGGATAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1352233	1352268	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT24;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1352269	1352298	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER24;Parent=SEQF6866.1|CP012719.1_1;Note=CAACAATTGCACATGGTGATTATGCTGCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1352299	1352334	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT25;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1352335	1352364	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER25;Parent=SEQF6866.1|CP012719.1_1;Note=TTACTTTTTTGCGTTTTTGCCGTAAAATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1352365	1352400	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT26;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	binding_site	1352401	1352430	30	+	.	ID=SEQF6866.1|CP012719.1_1_SPACER26;Parent=SEQF6866.1|CP012719.1_1;Note=ATAACTTTATCATTCTTTCTGTCATGAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	direct_repeat	1352431	1352466	36	+	.	ID=SEQF6866.1|CP012719.1_1_REPEAT27;Parent=SEQF6866.1|CP012719.1_1;Note=GTTTTGGAACCATTCGAAACAGCACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6866.1|CP012719.1	CCTyper	OPERON	1352558	1358454	5897	-	.	ID=SEQF6866.1|CP012719.1@31;Genome_ID=SEQF6866.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=1241,1242,1243,1244;E-values=4.10e-100,5.20e-49,6.90e-104,0.00e+00;CoverageSeq=0.982,0.965,0.931,0.996;CoverageHMM=0.995,0.983,0.996,0.999;Strand_Interference=-1;Strand_Adaptation=-1
SEQF6866.1|CP012719.1	CCTyper	OPERON	47720	48328	609	+	.	ID=SEQF6866.1|CP012719.1@1;Genome_ID=SEQF6866.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-D;Complete_Interference=100%;Complete_Adaptation=0%;Best_type=II-D;Best_score=4.0;Genes=Cas9_0_II-D;Positions=34;E-values=3.40e-12;CoverageSeq=0.645;CoverageHMM=0.137;Strand_Interference=1;Strand_Adaptation=NA
SEQF6866.1|CP012719.1	CCTyper	CDS	1353551	1354417	289	-	.	ID=SEQF6866.1|CP012719.1_1243_cas;Genome_ID=SEQF6866.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.9e-104;Score=343.6;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF6866.1|CP012719.1	CCTyper	CDS	1353210	1353554	115	-	.	ID=SEQF6866.1|CP012719.1_1242_cas;Genome_ID=SEQF6866.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=5.2e-49;Score=162.1;Coverage_Seq=0.9652173913043478;Coverage_Hmm=0.9827586206896551
SEQF6866.1|CP012719.1	CCTyper	CDS	47720	48328	203	+	.	ID=SEQF6866.1|CP012719.1_34_cas;Genome_ID=SEQF6866.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II-D;coding_strand=+;E-value=3.4e-12;Score=42.4;Coverage_Seq=0.645320197044335;Coverage_Hmm=0.13716295427901523
SEQF6866.1|CP012719.1	CCTyper	CDS	1354417	1358454	1346	-	.	ID=SEQF6866.1|CP012719.1_1244_cas;Genome_ID=SEQF6866.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1210.4;Coverage_Seq=0.9955423476968797;Coverage_Hmm=0.9991071428571429
SEQF6866.1|CP012719.1	CCTyper	CDS	1352558	1353220	221	-	.	ID=SEQF6866.1|CP012719.1_1241_cas;Genome_ID=SEQF6866.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=4.1e-100;Score=330.7;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973