SEQF6869.1|CP069892.1	CCTyper	repeat_region	1162377	1162840	464	+	.	ID=SEQF6869.1|CP069892.1_1;Genome_ID=SEQF6869.1;Note=Predictor:CCtyper;Start:1162377;End:1162840;Consensus_Repeat:GTTTCCGTCCCCTCTCGAGGTAATATAGGTTACTAAC;Number_of_Repeats:7;Repeat_Length:37;Average_Spacer_Length:34.2;Repeat_Identity:100.0;Spacer_Identity:45.3;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.974;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1162377	1162413	37	+	.	ID=SEQF6869.1|CP069892.1_1_REPEAT1;Parent=SEQF6869.1|CP069892.1_1;Note=GTTTCCGTCCCCTCTCGAGGTAATATAGGTTACTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	binding_site	1162414	1162447	34	+	.	ID=SEQF6869.1|CP069892.1_1_SPACER1;Parent=SEQF6869.1|CP069892.1_1;Note=AAAAGGCGTTCTCGATAAGAATAGTAATAAGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1162448	1162484	37	+	.	ID=SEQF6869.1|CP069892.1_1_REPEAT2;Parent=SEQF6869.1|CP069892.1_1;Note=GTTTCCGTCCCCTCTCGAGGTAATATAGGTTACTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	binding_site	1162485	1162518	34	+	.	ID=SEQF6869.1|CP069892.1_1_SPACER2;Parent=SEQF6869.1|CP069892.1_1;Note=GTTCAAATGGTAAAGATACCCGTATCATTCGATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1162519	1162555	37	+	.	ID=SEQF6869.1|CP069892.1_1_REPEAT3;Parent=SEQF6869.1|CP069892.1_1;Note=GTTTCCGTCCCCTCTCGAGGTAATATAGGTTACTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	binding_site	1162556	1162589	34	+	.	ID=SEQF6869.1|CP069892.1_1_SPACER3;Parent=SEQF6869.1|CP069892.1_1;Note=CTTTATATTGAAAGTGAAATTGGAACATTTTCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1162590	1162626	37	+	.	ID=SEQF6869.1|CP069892.1_1_REPEAT4;Parent=SEQF6869.1|CP069892.1_1;Note=GTTTCCGTCCCCTCTCGAGGTAATATAGGTTACTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	binding_site	1162627	1162660	34	+	.	ID=SEQF6869.1|CP069892.1_1_SPACER4;Parent=SEQF6869.1|CP069892.1_1;Note=ATAAAAAGGAGCTTATAAATGATTGAACAAGTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1162661	1162697	37	+	.	ID=SEQF6869.1|CP069892.1_1_REPEAT5;Parent=SEQF6869.1|CP069892.1_1;Note=GTTTCCGTCCCCTCTCGAGGTAATATAGGTTACTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	binding_site	1162698	1162732	35	+	.	ID=SEQF6869.1|CP069892.1_1_SPACER5;Parent=SEQF6869.1|CP069892.1_1;Note=AAAAAATGAACGATACATGGACTAAGCTACACGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1162733	1162769	37	+	.	ID=SEQF6869.1|CP069892.1_1_REPEAT6;Parent=SEQF6869.1|CP069892.1_1;Note=GTTTCCGTCCCCTCTCGAGGTAATATAGGTTACTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	binding_site	1162770	1162803	34	+	.	ID=SEQF6869.1|CP069892.1_1_SPACER6;Parent=SEQF6869.1|CP069892.1_1;Note=TTTAGATAGTTAATTTAATGGTATTAAAATAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1162804	1162840	37	+	.	ID=SEQF6869.1|CP069892.1_1_REPEAT7;Parent=SEQF6869.1|CP069892.1_1;Note=GTTTCCGTCCCCTCTCGAGGTAATATAGGTTACTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	repeat_region	1171542	1172303	762	+	.	ID=SEQF6869.1|CP069892.1_2;Genome_ID=SEQF6869.1;Note=Predictor:CCtyper;Start:1171542;End:1172303;Consensus_Repeat:GTTTCCGTCCCCTCTCGAGGTAACATGGGTTATTAAC;Number_of_Repeats:11;Repeat_Length:37;Average_Spacer_Length:35.5;Repeat_Identity:94.4;Spacer_Identity:46.3;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.992;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1171542	1171578	37	+	.	ID=SEQF6869.1|CP069892.1_2_REPEAT1;Parent=SEQF6869.1|CP069892.1_2;Note=CAAAAAATCCCCTCTCGAGGTAACATGGGTTATTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	binding_site	1171579	1171612	34	+	.	ID=SEQF6869.1|CP069892.1_2_SPACER1;Parent=SEQF6869.1|CP069892.1_2;Note=CAAAGCAGAGCGGATTAGACGACACAGTCAACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1171613	1171649	37	+	.	ID=SEQF6869.1|CP069892.1_2_REPEAT2;Parent=SEQF6869.1|CP069892.1_2;Note=GTTTCCGTCCCCTCTCGAGGTAACATGGGTTATTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	binding_site	1171650	1171685	36	+	.	ID=SEQF6869.1|CP069892.1_2_SPACER2;Parent=SEQF6869.1|CP069892.1_2;Note=CTCCATTTACCAAACACATGGTAGAAAAGATGAAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1171686	1171722	37	+	.	ID=SEQF6869.1|CP069892.1_2_REPEAT3;Parent=SEQF6869.1|CP069892.1_2;Note=GTTTCCGTCCCCTCTCGAGGTAACATGGGTTATTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	binding_site	1171723	1171757	35	+	.	ID=SEQF6869.1|CP069892.1_2_SPACER3;Parent=SEQF6869.1|CP069892.1_2;Note=CAGACGAAGAATTAGACACATGTGAAGTCTGCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1171758	1171794	37	+	.	ID=SEQF6869.1|CP069892.1_2_REPEAT4;Parent=SEQF6869.1|CP069892.1_2;Note=GTTTCCGTCCCCTCTCGAGGTAACATGGGTTATTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	binding_site	1171795	1171830	36	+	.	ID=SEQF6869.1|CP069892.1_2_SPACER4;Parent=SEQF6869.1|CP069892.1_2;Note=CAAATTAAGAAGGAGGACAATTATGTCAGAACAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1171831	1171867	37	+	.	ID=SEQF6869.1|CP069892.1_2_REPEAT5;Parent=SEQF6869.1|CP069892.1_2;Note=GTTTCCGTCCCCTCTCGAGGTAACATGGGTTATTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	binding_site	1171868	1171901	34	+	.	ID=SEQF6869.1|CP069892.1_2_SPACER5;Parent=SEQF6869.1|CP069892.1_2;Note=CGAAAAAAAGAAAGTAAAATCGAAAACATGACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1171902	1171938	37	+	.	ID=SEQF6869.1|CP069892.1_2_REPEAT6;Parent=SEQF6869.1|CP069892.1_2;Note=GTTTCCGTCCCCTCTCGAGGTAACATGGGTTATTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	binding_site	1171939	1171974	36	+	.	ID=SEQF6869.1|CP069892.1_2_SPACER6;Parent=SEQF6869.1|CP069892.1_2;Note=CAGGATATCGGCAATAACACATCTACGATAAATATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1171975	1172011	37	+	.	ID=SEQF6869.1|CP069892.1_2_REPEAT7;Parent=SEQF6869.1|CP069892.1_2;Note=GTTTCCGTCCCCTCTCGAGGTAACATGGGTTATTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	binding_site	1172012	1172048	37	+	.	ID=SEQF6869.1|CP069892.1_2_SPACER7;Parent=SEQF6869.1|CP069892.1_2;Note=GCTTTACCACCAAGAGGTTGTTGCGTAACGGTTGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1172049	1172085	37	+	.	ID=SEQF6869.1|CP069892.1_2_REPEAT8;Parent=SEQF6869.1|CP069892.1_2;Note=GTTTCCGTCCCCTCTCGAGGTAACATGGGTTATTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	binding_site	1172086	1172121	36	+	.	ID=SEQF6869.1|CP069892.1_2_SPACER8;Parent=SEQF6869.1|CP069892.1_2;Note=TATTCAAAGCAGCTTGGAAAATGTTCAGAGCTAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1172122	1172158	37	+	.	ID=SEQF6869.1|CP069892.1_2_REPEAT9;Parent=SEQF6869.1|CP069892.1_2;Note=GTTTCCGTCCCCTCTCGAGGTAACATGGGTTATTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	binding_site	1172159	1172194	36	+	.	ID=SEQF6869.1|CP069892.1_2_SPACER9;Parent=SEQF6869.1|CP069892.1_2;Note=TATTCAAAGCAGCTTGGAAAATGTTCAGAGCTAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1172195	1172231	37	+	.	ID=SEQF6869.1|CP069892.1_2_REPEAT10;Parent=SEQF6869.1|CP069892.1_2;Note=GTTTCCGTCCCCTCTCGAGGTAACATGGGTTATTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	binding_site	1172232	1172266	35	+	.	ID=SEQF6869.1|CP069892.1_2_SPACER10;Parent=SEQF6869.1|CP069892.1_2;Note=CTATCTTGCTTTCGCTCTTGCGATAACGGTCTATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	direct_repeat	1172267	1172303	37	+	.	ID=SEQF6869.1|CP069892.1_2_REPEAT11;Parent=SEQF6869.1|CP069892.1_2;Note=GTTTCCGTCCCCTCTCGAGGTAACATGGGTTATTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6869.1|CP069892.1	CCTyper	OPERON	1162953	1179341	16389	-	.	ID=SEQF6869.1|CP069892.1@26;Genome_ID=SEQF6869.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=19.0;Genes=Csm6_1_CAS-III,Csm6_1_CAS-III,Csm5gr7_1_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_7_CAS-III-A,Cas10_1_CAS-III,Cas6_0_I-III,Cas2_2_CAS-I-II-III-IV-V-VI,Cas1_0_CAS-I-II-III-IV-V-VI,AbiEii_0_CAS-III;Positions=1116,1117,1118,1119,1120,1121,1122,1123,1124,1125,1129;E-values=1.50e-82,4.20e-71,4.60e-31,8.60e-39,3.40e-73,1.90e-22,1.60e-146,2.80e-23,8.00e-20,6.60e-79,5.00e-06;CoverageSeq=0.857,0.829,0.956,0.987,0.923,0.921,0.78,0.854,0.627,0.946,0.628;CoverageHMM=0.981,0.894,0.986,0.978,0.986,0.982,0.911,0.86,0.861,0.994,0.535;Strand_Interference=-1;Strand_Adaptation=NA
SEQF6869.1|CP069892.1	CCTyper	CDS	1178601	1179341	247	+	.	ID=SEQF6869.1|CP069892.1_1129_cas;Genome_ID=SEQF6869.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=+;E-value=5e-06;Score=23.1;Coverage_Seq=0.6275303643724697;Coverage_Hmm=0.5352112676056338
SEQF6869.1|CP069892.1	CCTyper	CDS	1168442	1170673	744	-	.	ID=SEQF6869.1|CP069892.1_1122_cas;Genome_ID=SEQF6869.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=-;E-value=1.6e-146;Score=486.4;Coverage_Seq=0.7795698924731183;Coverage_Hmm=0.9113149847094801
SEQF6869.1|CP069892.1	CCTyper	CDS	1172741	1173748	336	-	.	ID=SEQF6869.1|CP069892.1_1125_cas;Genome_ID=SEQF6869.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.6e-79;Score=262.0;Coverage_Seq=0.9464285714285714;Coverage_Hmm=0.9936908517350158
SEQF6869.1|CP069892.1	CCTyper	CDS	1172409	1172738	110	-	.	ID=SEQF6869.1|CP069892.1_1124_cas;Genome_ID=SEQF6869.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8e-20;Score=67.7;Coverage_Seq=0.6272727272727273;Coverage_Hmm=0.8607594936708861
SEQF6869.1|CP069892.1	CCTyper	CDS	1170654	1171310	219	-	.	ID=SEQF6869.1|CP069892.1_1123_cas;Genome_ID=SEQF6869.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_I-III;coding_strand=-;E-value=2.8000000000000003e-23;Score=80.2;Coverage_Seq=0.8538812785388128;Coverage_Hmm=0.86
SEQF6869.1|CP069892.1	CCTyper	CDS	1168058	1168438	127	-	.	ID=SEQF6869.1|CP069892.1_1121_cas;Genome_ID=SEQF6869.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=-;E-value=1.9e-22;Score=77.1;Coverage_Seq=0.9212598425196851;Coverage_Hmm=0.9818181818181818
SEQF6869.1|CP069892.1	CCTyper	CDS	1167394	1168056	221	-	.	ID=SEQF6869.1|CP069892.1_1120_cas;Genome_ID=SEQF6869.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=3.4e-73;Score=242.8;Coverage_Seq=0.9230769230769231;Coverage_Hmm=0.986046511627907
SEQF6869.1|CP069892.1	CCTyper	CDS	1166493	1167392	300	-	.	ID=SEQF6869.1|CP069892.1_1119_cas;Genome_ID=SEQF6869.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=8.6e-39;Score=130.4;Coverage_Seq=0.9866666666666667;Coverage_Hmm=0.9777777777777777
SEQF6869.1|CP069892.1	CCTyper	CDS	1165397	1166491	365	-	.	ID=SEQF6869.1|CP069892.1_1118_cas;Genome_ID=SEQF6869.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=4.6e-31;Score=105.6;Coverage_Seq=0.9561643835616438;Coverage_Hmm=0.986449864498645
SEQF6869.1|CP069892.1	CCTyper	CDS	1162953	1164233	427	-	.	ID=SEQF6869.1|CP069892.1_1116_cas;Genome_ID=SEQF6869.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=-;E-value=1.5e-82;Score=274.2;Coverage_Seq=0.8571428571428571;Coverage_Hmm=0.9805555555555555
SEQF6869.1|CP069892.1	CCTyper	CDS	1164243	1165400	386	-	.	ID=SEQF6869.1|CP069892.1_1117_cas;Genome_ID=SEQF6869.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=-;E-value=4.2e-71;Score=236.5;Coverage_Seq=0.8290155440414507;Coverage_Hmm=0.8944444444444445