SEQF7008.1|JAJBCN010000006.1	CCTyper	repeat_region	83117	83876	760	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1;Genome_ID=SEQF7008.1;Note=Predictor:CCtyper;Start:83117;End:83876;Consensus_Repeat:GGATCACCCCCGCGTGTGCGGGTAAAAC;Number_of_Repeats:13;Repeat_Length:28;Average_Spacer_Length:33.0;Repeat_Identity:88.7;Spacer_Identity:43.2;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.984;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	direct_repeat	83117	83144	28	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_REPEAT1;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=ATCACAAATCTATATGTATAGGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	binding_site	83145	83177	33	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_SPACER1;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=ATGATTTCTGTATCTGATTCGTTGTTGTCACTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	direct_repeat	83178	83205	28	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_REPEAT2;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=GGATCACCCCCGCGTGTGCGGGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	binding_site	83206	83238	33	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_SPACER2;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=CTCCCGTCAGGGATTACACGGTTTGTTAATATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	direct_repeat	83239	83266	28	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_REPEAT3;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=GGATCACCCCCGCGTGTGCGGGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	binding_site	83267	83299	33	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_SPACER3;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=TGTTAATTGATTTTCTCGACCTGTCCCATAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	direct_repeat	83300	83327	28	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_REPEAT4;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=GGATCACCCCCGCGTGTGCGGGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	binding_site	83328	83360	33	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_SPACER4;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=AAACCAAATCATTATCAAGATTATCAAGGCGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	direct_repeat	83361	83388	28	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_REPEAT5;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=GGATCACCCCCGCGTGTGCGGGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	binding_site	83389	83421	33	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_SPACER5;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=TTTTTTTAATATCAAAAATCTCTTCTGCATTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	direct_repeat	83422	83449	28	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_REPEAT6;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=GGATCACCCCCGCGTGTGCGGGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	binding_site	83450	83482	33	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_SPACER6;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=TTGCACCTTTAGTCATCTCACCTGCAACTTCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	direct_repeat	83483	83510	28	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_REPEAT7;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=GGATCACCCCCGCGTGTGCGGGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	binding_site	83511	83543	33	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_SPACER7;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=TGATTTTACATATGTGAAAAGTTTCATAGTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	direct_repeat	83544	83571	28	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_REPEAT8;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=GGATCACCCCCGCGTGTGCGGGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	binding_site	83572	83604	33	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_SPACER8;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=TGTTCCTGAAAGATGGAATTAAGCTAAGACATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	direct_repeat	83605	83632	28	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_REPEAT9;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=GGATCACCCCCGCGTGTGCGGGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	binding_site	83633	83665	33	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_SPACER9;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=CAAAAATGTTCAGTTAACCATTCTTTCCCATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	direct_repeat	83666	83693	28	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_REPEAT10;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=GGATCACCCCCGCGTGTGCGGGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	binding_site	83694	83726	33	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_SPACER10;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=CCCTCCATCTGACGTCTCAACGTATGGATTCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	direct_repeat	83727	83754	28	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_REPEAT11;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=GGATCACCCCCGCGTGTGCGGGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	binding_site	83755	83787	33	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_SPACER11;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=GGTATATTTCATTCTGATTTCTCTTCTCTTGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	direct_repeat	83788	83815	28	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_REPEAT12;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=GGATCACCCCCGCGTGTGCGGGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	binding_site	83816	83848	33	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_SPACER12;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=CTTTAATCTCTCGTGAATATAACTGTAATCCCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	direct_repeat	83849	83876	28	+	.	ID=SEQF7008.1|JAJBCN010000006.1_1_REPEAT13;Parent=SEQF7008.1|JAJBCN010000006.1_1;Note=GGATCACCCCCGCGTGTGCGGGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000014.1	CCTyper	repeat_region	17631	17929	299	+	.	ID=SEQF7008.1|JAJBCN010000014.1_2;Genome_ID=SEQF7008.1;Note=Predictor:CCtyper;Start:17631;End:17929;Consensus_Repeat:GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Number_of_Repeats:5;Repeat_Length:36;Average_Spacer_Length:29.8;Repeat_Identity:100.0;Spacer_Identity:42.0;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.946;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000014.1	CCTyper	direct_repeat	17631	17666	36	+	.	ID=SEQF7008.1|JAJBCN010000014.1_2_REPEAT1;Parent=SEQF7008.1|JAJBCN010000014.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000014.1	CCTyper	binding_site	17667	17696	30	+	.	ID=SEQF7008.1|JAJBCN010000014.1_2_SPACER1;Parent=SEQF7008.1|JAJBCN010000014.1_2;Note=TTACGGAAGCTACAGAATTCTACAACATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000014.1	CCTyper	direct_repeat	17697	17732	36	+	.	ID=SEQF7008.1|JAJBCN010000014.1_2_REPEAT2;Parent=SEQF7008.1|JAJBCN010000014.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000014.1	CCTyper	binding_site	17733	17762	30	+	.	ID=SEQF7008.1|JAJBCN010000014.1_2_SPACER2;Parent=SEQF7008.1|JAJBCN010000014.1_2;Note=TAATCAGAAAGATAAAGAAAGGAGAAACGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000014.1	CCTyper	direct_repeat	17763	17798	36	+	.	ID=SEQF7008.1|JAJBCN010000014.1_2_REPEAT3;Parent=SEQF7008.1|JAJBCN010000014.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000014.1	CCTyper	binding_site	17799	17828	30	+	.	ID=SEQF7008.1|JAJBCN010000014.1_2_SPACER3;Parent=SEQF7008.1|JAJBCN010000014.1_2;Note=ATTTCAGAGAGTTTAAGTCTCATGTAACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000014.1	CCTyper	direct_repeat	17829	17864	36	+	.	ID=SEQF7008.1|JAJBCN010000014.1_2_REPEAT4;Parent=SEQF7008.1|JAJBCN010000014.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000014.1	CCTyper	binding_site	17865	17893	29	+	.	ID=SEQF7008.1|JAJBCN010000014.1_2_SPACER4;Parent=SEQF7008.1|JAJBCN010000014.1_2;Note=TTTAGCTGCGAGTTTCTTTTTGTCAGATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000014.1	CCTyper	direct_repeat	17894	17929	36	+	.	ID=SEQF7008.1|JAJBCN010000014.1_2_REPEAT5;Parent=SEQF7008.1|JAJBCN010000014.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7008.1|JAJBCN010000006.1	CCTyper	OPERON	83900	94388	10489	-	.	ID=SEQF7008.1|JAJBCN010000006.1@3;Genome_ID=SEQF7008.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=50%;Best_type=I-E;Best_score=22.0;Genes=DEDDh_0_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas5_2_CAS-I,Cas7_1_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas8e_4_CAS-I-E,Cas3_1_CAS-I,WYL_3_CAS-I-II-III-IV-V-VI;Positions=76,77,78,79,80,81,82,83,84;E-values=6.90e-34,5.10e-108,4.70e-48,2.80e-44,1.00e-116,8.10e-66,3.90e-87,7.50e-70,2.20e-09;CoverageSeq=0.513,0.854,0.972,0.871,0.911,0.948,0.895,0.528,0.494;CoverageHMM=0.988,0.993,0.995,0.991,0.964,0.965,0.991,0.605,0.907;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7008.1|JAJBCN010000014.1	CCTyper	OPERON	11753	19571	7819	+	.	ID=SEQF7008.1|JAJBCN010000014.1@1;Genome_ID=SEQF7008.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_0_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_2_CAS-II-A,Csa5gr11_3_CAS-I-A;Positions=11,12,13,14,16;E-values=3.70e-185,2.50e-97,2.70e-31,3.70e-126,2.00e-04;CoverageSeq=0.733,0.911,0.963,0.989,0.663;CoverageHMM=0.959,0.996,0.897,1.0,0.389;Strand_Interference=1;Strand_Adaptation=1
SEQF7008.1|JAJBCN010000006.1	CCTyper	CDS	84808	85749	314	-	.	ID=SEQF7008.1|JAJBCN010000006.1_77_cas;Genome_ID=SEQF7008.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=5.1e-108;Score=357.1;Coverage_Seq=0.8535031847133758;Coverage_Hmm=0.9925650557620818
SEQF7008.1|JAJBCN010000014.1	CCTyper	CDS	15299	16207	303	+	.	ID=SEQF7008.1|JAJBCN010000014.1_12_cas;Genome_ID=SEQF7008.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.5e-97;Score=322.1;Coverage_Seq=0.9108910891089109;Coverage_Hmm=0.9963636363636363
SEQF7008.1|JAJBCN010000014.1	CCTyper	CDS	16210	16533	108	+	.	ID=SEQF7008.1|JAJBCN010000014.1_13_cas;Genome_ID=SEQF7008.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.6999999999999997e-31;Score=105.0;Coverage_Seq=0.9629629629629629;Coverage_Hmm=0.896551724137931
SEQF7008.1|JAJBCN010000006.1	CCTyper	CDS	90434	93223	930	-	.	ID=SEQF7008.1|JAJBCN010000006.1_83_cas;Genome_ID=SEQF7008.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=7.5e-70;Score=232.9;Coverage_Seq=0.5279569892473118;Coverage_Hmm=0.6053691275167785
SEQF7008.1|JAJBCN010000006.1	CCTyper	CDS	86396	87118	241	-	.	ID=SEQF7008.1|JAJBCN010000006.1_79_cas;Genome_ID=SEQF7008.1;Feature_type=CDS;Product=Cas Prediction : Cas5_2_CAS-I;coding_strand=-;E-value=2.8e-44;Score=148.3;Coverage_Seq=0.8713692946058091;Coverage_Hmm=0.9906103286384976
SEQF7008.1|JAJBCN010000006.1	CCTyper	CDS	85751	86392	214	-	.	ID=SEQF7008.1|JAJBCN010000006.1_78_cas;Genome_ID=SEQF7008.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=4.7000000000000004e-48;Score=160.9;Coverage_Seq=0.9719626168224299;Coverage_Hmm=0.995049504950495
SEQF7008.1|JAJBCN010000006.1	CCTyper	CDS	87128	88204	359	-	.	ID=SEQF7008.1|JAJBCN010000006.1_80_cas;Genome_ID=SEQF7008.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=-;E-value=1e-116;Score=387.1;Coverage_Seq=0.9108635097493036;Coverage_Hmm=0.9637883008356546
SEQF7008.1|JAJBCN010000006.1	CCTyper	CDS	88786	90441	552	-	.	ID=SEQF7008.1|JAJBCN010000006.1_82_cas;Genome_ID=SEQF7008.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=-;E-value=3.9000000000000003e-87;Score=289.9;Coverage_Seq=0.894927536231884;Coverage_Hmm=0.9913978494623656
SEQF7008.1|JAJBCN010000014.1	CCTyper	CDS	11753	15130	1126	+	.	ID=SEQF7008.1|JAJBCN010000014.1_11_cas;Genome_ID=SEQF7008.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=3.7e-185;Score=614.4;Coverage_Seq=0.7326820603907638;Coverage_Hmm=0.9590361445783132
SEQF7008.1|JAJBCN010000014.1	CCTyper	CDS	19287	19571	95	+	.	ID=SEQF7008.1|JAJBCN010000014.1_16_cas;Genome_ID=SEQF7008.1;Feature_type=CDS;Product=Cas Prediction : Csa5gr11_3_CAS-I-A;coding_strand=+;E-value=0.0002;Score=18.4;Coverage_Seq=0.6631578947368421;Coverage_Hmm=0.3888888888888889
SEQF7008.1|JAJBCN010000006.1	CCTyper	CDS	88194	88775	194	-	.	ID=SEQF7008.1|JAJBCN010000006.1_81_cas;Genome_ID=SEQF7008.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=-;E-value=8.1e-66;Score=218.2;Coverage_Seq=0.9484536082474226;Coverage_Hmm=0.964824120603015
SEQF7008.1|JAJBCN010000014.1	CCTyper	CDS	16530	17579	350	+	.	ID=SEQF7008.1|JAJBCN010000014.1_14_cas;Genome_ID=SEQF7008.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=+;E-value=3.7e-126;Score=417.4;Coverage_Seq=0.9885714285714285;Coverage_Hmm=1.0
SEQF7008.1|JAJBCN010000006.1	CCTyper	CDS	83900	84805	302	-	.	ID=SEQF7008.1|JAJBCN010000006.1_76_cas;Genome_ID=SEQF7008.1;Feature_type=CDS;Product=Cas Prediction : DEDDh_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.9e-34;Score=114.1;Coverage_Seq=0.5132450331125827;Coverage_Hmm=0.9875
SEQF7008.1|JAJBCN010000006.1	CCTyper	CDS	93405	94388	328	-	.	ID=SEQF7008.1|JAJBCN010000006.1_84_cas;Genome_ID=SEQF7008.1;Feature_type=CDS;Product=Cas Prediction : WYL_3_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.2e-09;Score=34.4;Coverage_Seq=0.49390243902439024;Coverage_Hmm=0.9069767441860465