SEQF7014.1|JAJBGR010000004.1	CCTyper	repeat_region	19261	19494	234	+	.	ID=SEQF7014.1|JAJBGR010000004.1_1;Genome_ID=SEQF7014.1;Note=Predictor:CCtyper;Start:19261;End:19494;Consensus_Repeat:GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Number_of_Repeats:4;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:100.0;Spacer_Identity:39.6;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	direct_repeat	19261	19296	36	+	.	ID=SEQF7014.1|JAJBGR010000004.1_1_REPEAT1;Parent=SEQF7014.1|JAJBGR010000004.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	binding_site	19297	19326	30	+	.	ID=SEQF7014.1|JAJBGR010000004.1_1_SPACER1;Parent=SEQF7014.1|JAJBGR010000004.1_1;Note=TCGTTACTACATACGTTATGCGTACATATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	direct_repeat	19327	19362	36	+	.	ID=SEQF7014.1|JAJBGR010000004.1_1_REPEAT2;Parent=SEQF7014.1|JAJBGR010000004.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	binding_site	19363	19392	30	+	.	ID=SEQF7014.1|JAJBGR010000004.1_1_SPACER2;Parent=SEQF7014.1|JAJBGR010000004.1_1;Note=GAGAGTGCTCAAAGTGAAAGCACCCTTCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	direct_repeat	19393	19428	36	+	.	ID=SEQF7014.1|JAJBGR010000004.1_1_REPEAT3;Parent=SEQF7014.1|JAJBGR010000004.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	binding_site	19429	19458	30	+	.	ID=SEQF7014.1|JAJBGR010000004.1_1_SPACER3;Parent=SEQF7014.1|JAJBGR010000004.1_1;Note=GGAAGTAACTTTTTAATCTTCTTTGCACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	direct_repeat	19459	19494	36	+	.	ID=SEQF7014.1|JAJBGR010000004.1_1_REPEAT4;Parent=SEQF7014.1|JAJBGR010000004.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	repeat_region	118831	119348	518	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2;Genome_ID=SEQF7014.1;Note=Predictor:CCtyper;Start:118831;End:119348;Consensus_Repeat:GGATCACCCCCGCTCGTGCGGGTAAAAT;Number_of_Repeats:9;Repeat_Length:28;Average_Spacer_Length:33.2;Repeat_Identity:100.0;Spacer_Identity:42.5;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.261;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	direct_repeat	118831	118858	28	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_REPEAT1;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=GGATCACCCCCGCTCGTGCGGGTAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	binding_site	118859	118891	33	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_SPACER1;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=GTGCTTGAGTAAGTACCTAAATAACGTTTTGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	direct_repeat	118892	118919	28	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_REPEAT2;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=GGATCACCCCCGCTCGTGCGGGTAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	binding_site	118920	118952	33	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_SPACER2;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=CTAACGATGAGTACAACAAGCGGCAAAATTTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	direct_repeat	118953	118980	28	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_REPEAT3;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=GGATCACCCCCGCTCGTGCGGGTAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	binding_site	118981	119013	33	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_SPACER3;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=TCGCTGATGGCAAAGCTGACAGTGTGAAAGCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	direct_repeat	119014	119041	28	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_REPEAT4;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=GGATCACCCCCGCTCGTGCGGGTAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	binding_site	119042	119075	34	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_SPACER4;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=ATTTGGCGCTATAGTCTCTACTCTAAGAGCTCGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	direct_repeat	119076	119103	28	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_REPEAT5;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=GGATCACCCCCGCTCGTGCGGGTAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	binding_site	119104	119137	34	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_SPACER5;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=TACTCGTCTTCTTATCATTTAATATCGTCTTTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	direct_repeat	119138	119165	28	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_REPEAT6;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=GGATCACCCCCGCTCGTGCGGGTAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	binding_site	119166	119198	33	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_SPACER6;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=ATTCTTCTTGATTGATTAGTTTATCCCAATCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	direct_repeat	119199	119226	28	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_REPEAT7;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=GGATCACCCCCGCTCGTGCGGGTAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	binding_site	119227	119259	33	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_SPACER7;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=TTGGCTCTTTTGGTAAATTTGCTAGTGGAGTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	direct_repeat	119260	119287	28	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_REPEAT8;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=GGATCACCCCCGCTCGTGCGGGTAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	binding_site	119288	119320	33	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_SPACER8;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=ATCAATGATTGCCCCATTCTCAACAATATGTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	direct_repeat	119321	119348	28	+	.	ID=SEQF7014.1|JAJBGR010000004.1_2_REPEAT9;Parent=SEQF7014.1|JAJBGR010000004.1_2;Note=GGATCACCCCCGCTCGTGCGGGTAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7014.1|JAJBGR010000004.1	CCTyper	OPERON	119372	130028	10657	-	.	ID=SEQF7014.1|JAJBGR010000004.1@4;Genome_ID=SEQF7014.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=50%;Best_type=I-E;Best_score=24.0;Genes=DEDDh_0_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas5_0_IE,Cas7_1_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas8e_4_CAS-I-E,Cas3_0_CAS-I,WYL_3_CAS-I-II-III-IV-V-VI;Positions=107,108,109,110,111,112,113,114,115;E-values=4.80e-35,3.10e-108,2.40e-47,1.80e-42,2.60e-113,1.20e-67,1.90e-91,1.00e-69,1.20e-09;CoverageSeq=0.512,0.854,0.972,0.862,0.943,0.95,0.888,0.438,0.485;CoverageHMM=0.981,0.993,0.995,0.974,0.997,0.975,0.994,0.983,0.89;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7014.1|JAJBGR010000004.1	CCTyper	OPERON	17620	26218	8599	-	.	ID=SEQF7014.1|JAJBGR010000004.1@1;Genome_ID=SEQF7014.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csa5gr11_3_CAS-I-A,Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II,Cas9_0_II;Positions=16,20,21,22,23,24;E-values=2.10e-04,1.00e-106,1.40e-51,1.70e-103,1.70e-151,2.10e-271;CoverageSeq=0.663,0.982,0.965,0.931,0.987,0.983;CoverageHMM=0.389,0.995,0.983,0.996,0.411,0.787;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7014.1|JAJBGR010000004.1	CCTyper	CDS	120276	121217	314	-	.	ID=SEQF7014.1|JAJBGR010000004.1_108_cas;Genome_ID=SEQF7014.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=3.1e-108;Score=357.8;Coverage_Seq=0.8535031847133758;Coverage_Hmm=0.9925650557620818
SEQF7014.1|JAJBGR010000004.1	CCTyper	CDS	21325	22191	289	-	.	ID=SEQF7014.1|JAJBGR010000004.1_22_cas;Genome_ID=SEQF7014.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.7e-103;Score=342.4;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF7014.1|JAJBGR010000004.1	CCTyper	CDS	20984	21328	115	-	.	ID=SEQF7014.1|JAJBGR010000004.1_21_cas;Genome_ID=SEQF7014.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.4e-51;Score=170.4;Coverage_Seq=0.9652173913043478;Coverage_Hmm=0.9827586206896551
SEQF7014.1|JAJBGR010000004.1	CCTyper	CDS	126069	128855	929	-	.	ID=SEQF7014.1|JAJBGR010000004.1_114_cas;Genome_ID=SEQF7014.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=-;E-value=1e-69;Score=232.1;Coverage_Seq=0.4381054897739505;Coverage_Hmm=0.9830028328611898
SEQF7014.1|JAJBGR010000004.1	CCTyper	CDS	121866	122582	239	-	.	ID=SEQF7014.1|JAJBGR010000004.1_110_cas;Genome_ID=SEQF7014.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IE;coding_strand=-;E-value=1.8e-42;Score=142.4;Coverage_Seq=0.8619246861924686;Coverage_Hmm=0.9739130434782609
SEQF7014.1|JAJBGR010000004.1	CCTyper	CDS	121219	121860	214	-	.	ID=SEQF7014.1|JAJBGR010000004.1_109_cas;Genome_ID=SEQF7014.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.4e-47;Score=158.7;Coverage_Seq=0.9719626168224299;Coverage_Hmm=0.995049504950495
SEQF7014.1|JAJBGR010000004.1	CCTyper	CDS	122588	123808	407	-	.	ID=SEQF7014.1|JAJBGR010000004.1_111_cas;Genome_ID=SEQF7014.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=-;E-value=2.6e-113;Score=375.9;Coverage_Seq=0.9434889434889435;Coverage_Hmm=0.9972144846796658
SEQF7014.1|JAJBGR010000004.1	CCTyper	CDS	124394	126076	561	-	.	ID=SEQF7014.1|JAJBGR010000004.1_113_cas;Genome_ID=SEQF7014.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=-;E-value=1.9e-91;Score=304.1;Coverage_Seq=0.8877005347593583;Coverage_Hmm=0.9935483870967742
SEQF7014.1|JAJBGR010000004.1	CCTyper	CDS	23591	26218	876	-	.	ID=SEQF7014.1|JAJBGR010000004.1_24_cas;Genome_ID=SEQF7014.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=2.0999999999999998e-271;Score=899.7;Coverage_Seq=0.9828767123287672;Coverage_Hmm=0.7867469879518072
SEQF7014.1|JAJBGR010000004.1	CCTyper	CDS	22191	23594	468	-	.	ID=SEQF7014.1|JAJBGR010000004.1_23_cas;Genome_ID=SEQF7014.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=1.6999999999999998e-151;Score=503.4;Coverage_Seq=0.9871794871794872;Coverage_Hmm=0.4107142857142857
SEQF7014.1|JAJBGR010000004.1	CCTyper	CDS	17620	17904	95	-	.	ID=SEQF7014.1|JAJBGR010000004.1_16_cas;Genome_ID=SEQF7014.1;Feature_type=CDS;Product=Cas Prediction : Csa5gr11_3_CAS-I-A;coding_strand=-;E-value=0.00021;Score=18.4;Coverage_Seq=0.6631578947368421;Coverage_Hmm=0.3888888888888889
SEQF7014.1|JAJBGR010000004.1	CCTyper	CDS	123798	124397	200	-	.	ID=SEQF7014.1|JAJBGR010000004.1_112_cas;Genome_ID=SEQF7014.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=-;E-value=1.2e-67;Score=224.2;Coverage_Seq=0.95;Coverage_Hmm=0.9748743718592965
SEQF7014.1|JAJBGR010000004.1	CCTyper	CDS	20332	20994	221	-	.	ID=SEQF7014.1|JAJBGR010000004.1_20_cas;Genome_ID=SEQF7014.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=1e-106;Score=352.3;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973
SEQF7014.1|JAJBGR010000004.1	CCTyper	CDS	119372	120274	301	-	.	ID=SEQF7014.1|JAJBGR010000004.1_107_cas;Genome_ID=SEQF7014.1;Feature_type=CDS;Product=Cas Prediction : DEDDh_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=4.7999999999999997e-35;Score=117.9;Coverage_Seq=0.5116279069767442;Coverage_Hmm=0.98125
SEQF7014.1|JAJBGR010000004.1	CCTyper	CDS	129045	130028	328	-	.	ID=SEQF7014.1|JAJBGR010000004.1_115_cas;Genome_ID=SEQF7014.1;Feature_type=CDS;Product=Cas Prediction : WYL_3_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.2e-09;Score=35.3;Coverage_Seq=0.4847560975609756;Coverage_Hmm=0.8895348837209303