SEQF7040.1|JAJBDP010000010.1	CCTyper	repeat_region	11482	11755	274	+	.	ID=SEQF7040.1|JAJBDP010000010.1_1;Genome_ID=SEQF7040.1;Note=Predictor:CCtyper;Start:11482;End:11755;Consensus_Repeat:TAGGATCACCCCCGCTCGTGCGGGTAAAAT;Number_of_Repeats:5;Repeat_Length:30;Average_Spacer_Length:31.0;Repeat_Identity:94.9;Spacer_Identity:43.1;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.276;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000010.1	CCTyper	direct_repeat	11482	11511	30	+	.	ID=SEQF7040.1|JAJBDP010000010.1_1_REPEAT1;Parent=SEQF7040.1|JAJBDP010000010.1_1;Note=TGGGATCACCCCCGCTCGTGCGGGTAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000010.1	CCTyper	binding_site	11512	11542	31	+	.	ID=SEQF7040.1|JAJBDP010000010.1_1_SPACER1;Parent=SEQF7040.1|JAJBDP010000010.1_1;Note=GTCTGTATCTATATCTACGCATTGCATGCCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000010.1	CCTyper	direct_repeat	11543	11572	30	+	.	ID=SEQF7040.1|JAJBDP010000010.1_1_REPEAT2;Parent=SEQF7040.1|JAJBDP010000010.1_1;Note=TAGGATCACCCCCGCTCGTGCGGGTAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000010.1	CCTyper	binding_site	11573	11603	31	+	.	ID=SEQF7040.1|JAJBDP010000010.1_1_SPACER2;Parent=SEQF7040.1|JAJBDP010000010.1_1;Note=TCAACATACAAGTCATTTAAGCGACTTATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000010.1	CCTyper	direct_repeat	11604	11633	30	+	.	ID=SEQF7040.1|JAJBDP010000010.1_1_REPEAT3;Parent=SEQF7040.1|JAJBDP010000010.1_1;Note=TAGGATCACCCCCGCTCGTGCGGGTAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000010.1	CCTyper	binding_site	11634	11664	31	+	.	ID=SEQF7040.1|JAJBDP010000010.1_1_SPACER3;Parent=SEQF7040.1|JAJBDP010000010.1_1;Note=TCAGTGATAATGAAATCAGTGGGAAAATTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000010.1	CCTyper	direct_repeat	11665	11694	30	+	.	ID=SEQF7040.1|JAJBDP010000010.1_1_REPEAT4;Parent=SEQF7040.1|JAJBDP010000010.1_1;Note=CAGGATCACCCCCGCTCGTGCGGGTAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000010.1	CCTyper	binding_site	11695	11725	31	+	.	ID=SEQF7040.1|JAJBDP010000010.1_1_SPACER4;Parent=SEQF7040.1|JAJBDP010000010.1_1;Note=TTCACTGACTGGTTTATCATTGGTTGAAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000010.1	CCTyper	direct_repeat	11726	11755	30	+	.	ID=SEQF7040.1|JAJBDP010000010.1_1_REPEAT5;Parent=SEQF7040.1|JAJBDP010000010.1_1;Note=TAGGATCACCCCCGCTCGTGCGGGTAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	repeat_region	113	1007	895	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2;Genome_ID=SEQF7040.1;Note=Predictor:CCtyper;Start:113;End:1007;Consensus_Repeat:GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Number_of_Repeats:14;Repeat_Length:36;Average_Spacer_Length:30.1;Repeat_Identity:100.0;Spacer_Identity:41.9;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	direct_repeat	113	148	36	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_REPEAT1;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GTTTTAGTAAATCAGTAACTAACATGGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	binding_site	149	177	29	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_SPACER1;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=ATGTGCCGCCTTTACGGATTATATGTGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	direct_repeat	178	213	36	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_REPEAT2;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	binding_site	214	243	30	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_SPACER2;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=CAGTAATAACATAAGTAAAGCTGTTTAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	direct_repeat	244	279	36	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_REPEAT3;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	binding_site	280	309	30	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_SPACER3;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=AGGTGAAAAGCACTGGTCGACAATGTGGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	direct_repeat	310	345	36	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_REPEAT4;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	binding_site	346	375	30	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_SPACER4;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GGAAGAGTTTGAGCAAAATTCTCAGTAGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	direct_repeat	376	411	36	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_REPEAT5;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	binding_site	412	441	30	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_SPACER5;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=CTTGAACCGGAGTTTCCAAGAATTTAGTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	direct_repeat	442	477	36	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_REPEAT6;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	binding_site	478	507	30	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_SPACER6;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GGCGCAGGGGAAAACCACCAATAAGATTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	direct_repeat	508	543	36	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_REPEAT7;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	binding_site	544	573	30	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_SPACER7;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GATTACCATATGACTCAATTATCAAGTGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	direct_repeat	574	609	36	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_REPEAT8;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	binding_site	610	639	30	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_SPACER8;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=ATTCGGACGAAAGAACATTTACTTAAACGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	direct_repeat	640	675	36	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_REPEAT9;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	binding_site	676	706	31	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_SPACER9;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=TAAAGAATTCTTCGATTATATTTCAAAAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	direct_repeat	707	742	36	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_REPEAT10;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	binding_site	743	772	30	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_SPACER10;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=AAAGCATCTATGAATACGTCGAAGTCCGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	direct_repeat	773	808	36	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_REPEAT11;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	binding_site	809	839	31	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_SPACER11;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=CAACGACTACGTTCATGCTCCGCAGGGTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	direct_repeat	840	875	36	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_REPEAT12;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	binding_site	876	905	30	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_SPACER12;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=ATGACTCATTAGTGACTGCGTTTAATAACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	direct_repeat	906	941	36	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_REPEAT13;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	binding_site	942	971	30	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_SPACER13;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=TCTGCAATGAAATAAGTAACTATATTAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	direct_repeat	972	1007	36	+	.	ID=SEQF7040.1|JAJBDP010000042.1_2_REPEAT14;Parent=SEQF7040.1|JAJBDP010000042.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7040.1|JAJBDP010000042.1	CCTyper	OPERON	1844	7740	5897	-	.	ID=SEQF7040.1|JAJBDP010000042.1@1;Genome_ID=SEQF7040.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=4,5,6,7;E-values=1.60e-106,1.60e-51,1.70e-103,0.00e+00;CoverageSeq=0.982,0.965,0.931,0.996;CoverageHMM=0.995,0.983,0.996,0.999;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7040.1|JAJBDP010000010.1	CCTyper	OPERON	11779	22341	10563	-	.	ID=SEQF7040.1|JAJBDP010000010.1@1;Genome_ID=SEQF7040.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=50%;Best_type=I-E;Best_score=24.0;Genes=DEDDh_0_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas5_0_IE,Cas7_1_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas8e_4_CAS-I-E,Cas3_0_CAS-I,WYL_3_CAS-I-II-III-IV-V-VI;Positions=9,10,11,12,13,14,15,16,17;E-values=5.40e-35,5.30e-108,8.60e-47,6.90e-42,1.50e-107,3.80e-70,1.50e-84,6.20e-70,1.30e-09;CoverageSeq=0.512,0.854,0.972,0.862,0.931,0.95,0.894,0.439,0.485;CoverageHMM=0.981,0.993,0.995,0.974,0.997,0.98,0.991,0.986,0.89;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7040.1|JAJBDP010000010.1	CCTyper	CDS	12683	13624	314	-	.	ID=SEQF7040.1|JAJBDP010000010.1_10_cas;Genome_ID=SEQF7040.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=5.3e-108;Score=357.2;Coverage_Seq=0.8535031847133758;Coverage_Hmm=0.9925650557620818
SEQF7040.1|JAJBDP010000042.1	CCTyper	CDS	2837	3703	289	-	.	ID=SEQF7040.1|JAJBDP010000042.1_6_cas;Genome_ID=SEQF7040.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.7e-103;Score=342.5;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF7040.1|JAJBDP010000042.1	CCTyper	CDS	2496	2840	115	-	.	ID=SEQF7040.1|JAJBDP010000042.1_5_cas;Genome_ID=SEQF7040.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.6e-51;Score=170.4;Coverage_Seq=0.9652173913043478;Coverage_Hmm=0.9827586206896551
SEQF7040.1|JAJBDP010000010.1	CCTyper	CDS	18382	21168	929	-	.	ID=SEQF7040.1|JAJBDP010000010.1_16_cas;Genome_ID=SEQF7040.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=-;E-value=6.2e-70;Score=233.0;Coverage_Seq=0.43918191603875134;Coverage_Hmm=0.9858356940509915
SEQF7040.1|JAJBDP010000010.1	CCTyper	CDS	14274	14990	239	-	.	ID=SEQF7040.1|JAJBDP010000010.1_12_cas;Genome_ID=SEQF7040.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IE;coding_strand=-;E-value=6.9e-42;Score=140.6;Coverage_Seq=0.8619246861924686;Coverage_Hmm=0.9739130434782609
SEQF7040.1|JAJBDP010000010.1	CCTyper	CDS	13627	14268	214	-	.	ID=SEQF7040.1|JAJBDP010000010.1_11_cas;Genome_ID=SEQF7040.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.6e-47;Score=157.0;Coverage_Seq=0.9719626168224299;Coverage_Hmm=0.995049504950495
SEQF7040.1|JAJBDP010000010.1	CCTyper	CDS	14996	16075	360	-	.	ID=SEQF7040.1|JAJBDP010000010.1_13_cas;Genome_ID=SEQF7040.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=-;E-value=1.5e-107;Score=357.1;Coverage_Seq=0.9305555555555556;Coverage_Hmm=0.9972144846796658
SEQF7040.1|JAJBDP010000010.1	CCTyper	CDS	16671	18389	573	-	.	ID=SEQF7040.1|JAJBDP010000010.1_15_cas;Genome_ID=SEQF7040.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=-;E-value=1.5e-84;Score=281.5;Coverage_Seq=0.893542757417103;Coverage_Hmm=0.9913978494623656
SEQF7040.1|JAJBDP010000042.1	CCTyper	CDS	3703	7740	1346	-	.	ID=SEQF7040.1|JAJBDP010000042.1_7_cas;Genome_ID=SEQF7040.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1274.6;Coverage_Seq=0.9955423476968797;Coverage_Hmm=0.9991071428571429
SEQF7040.1|JAJBDP010000010.1	CCTyper	CDS	16059	16661	201	-	.	ID=SEQF7040.1|JAJBDP010000010.1_14_cas;Genome_ID=SEQF7040.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=-;E-value=3.8e-70;Score=232.5;Coverage_Seq=0.9502487562189055;Coverage_Hmm=0.9798994974874372
SEQF7040.1|JAJBDP010000042.1	CCTyper	CDS	1844	2506	221	-	.	ID=SEQF7040.1|JAJBDP010000042.1_4_cas;Genome_ID=SEQF7040.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=1.6e-106;Score=351.8;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973
SEQF7040.1|JAJBDP010000010.1	CCTyper	CDS	11779	12681	301	-	.	ID=SEQF7040.1|JAJBDP010000010.1_9_cas;Genome_ID=SEQF7040.1;Feature_type=CDS;Product=Cas Prediction : DEDDh_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=5.4e-35;Score=117.9;Coverage_Seq=0.5116279069767442;Coverage_Hmm=0.98125
SEQF7040.1|JAJBDP010000010.1	CCTyper	CDS	21358	22341	328	-	.	ID=SEQF7040.1|JAJBDP010000010.1_17_cas;Genome_ID=SEQF7040.1;Feature_type=CDS;Product=Cas Prediction : WYL_3_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.3e-09;Score=35.3;Coverage_Seq=0.4847560975609756;Coverage_Hmm=0.8895348837209303