SEQF7060.1|JAJBEG010000001.1	CCTyper	repeat_region	234596	235172	577	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1;Genome_ID=SEQF7060.1;Note=Predictor:CCtyper;Start:234596;End:235172;Consensus_Repeat:ATTTTACCCGCACGAGCGGGGGTGATCC;Number_of_Repeats:10;Repeat_Length:28.0;Average_Spacer_Length:33;Repeat_Identity:100.0;Spacer_Identity:42.3;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.261;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	direct_repeat	234596	234623	28	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_REPEAT1;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	binding_site	234624	234656	33	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_SPACER1;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=TATTTTTCAACCAATGATAAACCAGTCAGTGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	direct_repeat	234657	234684	28	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_REPEAT2;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	binding_site	234685	234717	33	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_SPACER2;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=TGGAAATTTTCCCACTGATTTCATTATCACTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	direct_repeat	234718	234745	28	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_REPEAT3;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	binding_site	234746	234778	33	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_SPACER3;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=TAAAATAAGTCGCTTAAATGACTTGTATGTTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	direct_repeat	234779	234806	28	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_REPEAT4;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	binding_site	234807	234839	33	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_SPACER4;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=TACCAGTTGAACCAACTAAAGAAACTAAAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	direct_repeat	234840	234867	28	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_REPEAT5;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	binding_site	234868	234900	33	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_SPACER5;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=TGCACAACCATGTTGTTACCGTCAATCCGTTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	direct_repeat	234901	234928	28	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_REPEAT6;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	binding_site	234929	234961	33	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_SPACER6;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=TGGATAATTTATATTCTAAATTATTTATTTCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	direct_repeat	234962	234989	28	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_REPEAT7;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	binding_site	234990	235022	33	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_SPACER7;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=CGCAAACGGAAGTCCGCACGCGCAAAATGAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	direct_repeat	235023	235050	28	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_REPEAT8;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	binding_site	235051	235083	33	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_SPACER8;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=CACTGTATTTCCAACCCGAACGCCAACACCCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	direct_repeat	235084	235111	28	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_REPEAT9;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	binding_site	235112	235144	33	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_SPACER9;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=TACGGCATGCAATGCGTAGATATAGATACAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	direct_repeat	235145	235172	28	+	.	ID=SEQF7060.1|JAJBEG010000001.1_1_REPEAT10;Parent=SEQF7060.1|JAJBEG010000001.1_1;Note=ATTTTACCCGCACGAGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000009.1	CCTyper	repeat_region	84943	85101	159	+	.	ID=SEQF7060.1|JAJBEG010000009.1-3_3;Genome_ID=SEQF7060.1;Note=Predictor:CCtyper;Start:84943;End:85101;Consensus_Repeat:AGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Number_of_Repeats:3;Repeat_Length:33.7;Average_Spacer_Length:29;Repeat_Identity:78.9;Spacer_Identity:41.5;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.942;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000009.1	CCTyper	direct_repeat	84943	84969	27	+	.	ID=SEQF7060.1|JAJBEG010000009.1-3_3_REPEAT1;Parent=SEQF7060.1|JAJBEG010000009.1-3_3;Note=CTGTGTTGTTTCGAATAGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000009.1	CCTyper	binding_site	84970	84998	29	+	.	ID=SEQF7060.1|JAJBEG010000009.1-3_3_SPACER1;Parent=SEQF7060.1|JAJBEG010000009.1-3_3;Note=CATGCAATTACATATTCAACTAAGGGGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000009.1	CCTyper	direct_repeat	84999	85035	37	+	.	ID=SEQF7060.1|JAJBEG010000009.1-3_3_REPEAT2;Parent=SEQF7060.1|JAJBEG010000009.1-3_3;Note=AGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000009.1	CCTyper	binding_site	85036	85064	29	+	.	ID=SEQF7060.1|JAJBEG010000009.1-3_3_SPACER2;Parent=SEQF7060.1|JAJBEG010000009.1-3_3;Note=CGTTCAAAACTTCTGCCCCAGCTGGCAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000009.1	CCTyper	direct_repeat	85065	85101	37	+	.	ID=SEQF7060.1|JAJBEG010000009.1-3_3_REPEAT3;Parent=SEQF7060.1|JAJBEG010000009.1-3_3;Note=AGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7060.1|JAJBEG010000001.1	CCTyper	OPERON	224010	234572	10563	+	.	ID=SEQF7060.1|JAJBEG010000001.1@6;Genome_ID=SEQF7060.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=50%;Best_type=I-E;Best_score=24.0;Genes=WYL_3_CAS-I-II-III-IV-V-VI,Cas3_0_CAS-I,Cas8e_4_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas7_1_CAS-I-E,Cas5_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas1_0_IE,DEDDh_0_CAS-I-II-III-IV-V-VI;Positions=228,229,230,231,232,233,234,235,236;E-values=1.20e-09,5.70e-70,1.40e-84,3.40e-70,1.30e-107,6.30e-42,7.80e-47,4.80e-108,4.90e-35;CoverageSeq=0.485,0.439,0.894,0.95,0.931,0.862,0.972,0.854,0.512;CoverageHMM=0.89,0.986,0.991,0.98,0.997,0.974,0.995,0.993,0.981;Strand_Interference=1;Strand_Adaptation=1
SEQF7060.1|JAJBEG010000001.1	CCTyper	CDS	232727	233668	314	+	.	ID=SEQF7060.1|JAJBEG010000001.1_235_cas;Genome_ID=SEQF7060.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=+;E-value=4.8e-108;Score=357.2;Coverage_Seq=0.8535031847133758;Coverage_Hmm=0.9925650557620818
SEQF7060.1|JAJBEG010000001.1	CCTyper	CDS	225183	227969	929	+	.	ID=SEQF7060.1|JAJBEG010000001.1_229_cas;Genome_ID=SEQF7060.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=+;E-value=5.6999999999999996e-70;Score=233.0;Coverage_Seq=0.43918191603875134;Coverage_Hmm=0.9858356940509915
SEQF7060.1|JAJBEG010000001.1	CCTyper	CDS	231361	232077	239	+	.	ID=SEQF7060.1|JAJBEG010000001.1_233_cas;Genome_ID=SEQF7060.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IE;coding_strand=+;E-value=6.3e-42;Score=140.6;Coverage_Seq=0.8619246861924686;Coverage_Hmm=0.9739130434782609
SEQF7060.1|JAJBEG010000001.1	CCTyper	CDS	232083	232724	214	+	.	ID=SEQF7060.1|JAJBEG010000001.1_234_cas;Genome_ID=SEQF7060.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=7.8e-47;Score=157.0;Coverage_Seq=0.9719626168224299;Coverage_Hmm=0.995049504950495
SEQF7060.1|JAJBEG010000001.1	CCTyper	CDS	230276	231355	360	+	.	ID=SEQF7060.1|JAJBEG010000001.1_232_cas;Genome_ID=SEQF7060.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=+;E-value=1.2999999999999999e-107;Score=357.1;Coverage_Seq=0.9305555555555556;Coverage_Hmm=0.9972144846796658
SEQF7060.1|JAJBEG010000001.1	CCTyper	CDS	227962	229680	573	+	.	ID=SEQF7060.1|JAJBEG010000001.1_230_cas;Genome_ID=SEQF7060.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=+;E-value=1.4e-84;Score=281.5;Coverage_Seq=0.893542757417103;Coverage_Hmm=0.9913978494623656
SEQF7060.1|JAJBEG010000001.1	CCTyper	CDS	229690	230292	201	+	.	ID=SEQF7060.1|JAJBEG010000001.1_231_cas;Genome_ID=SEQF7060.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=+;E-value=3.4e-70;Score=232.5;Coverage_Seq=0.9502487562189055;Coverage_Hmm=0.9798994974874372
SEQF7060.1|JAJBEG010000001.1	CCTyper	CDS	233670	234572	301	+	.	ID=SEQF7060.1|JAJBEG010000001.1_236_cas;Genome_ID=SEQF7060.1;Feature_type=CDS;Product=Cas Prediction : DEDDh_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=4.899999999999999e-35;Score=117.9;Coverage_Seq=0.5116279069767442;Coverage_Hmm=0.98125
SEQF7060.1|JAJBEG010000001.1	CCTyper	CDS	224010	224993	328	+	.	ID=SEQF7060.1|JAJBEG010000001.1_228_cas;Genome_ID=SEQF7060.1;Feature_type=CDS;Product=Cas Prediction : WYL_3_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.2e-09;Score=35.3;Coverage_Seq=0.4847560975609756;Coverage_Hmm=0.8895348837209303