SEQF7100.1|CP029546.1	CCTyper	repeat_region	2144816	2145973	1158	+	.	ID=SEQF7100.1|CP029546.1_1;Genome_ID=SEQF7100.1;Note=Predictor:CCtyper;Start:2144816;End:2145973;Consensus_Repeat:GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Number_of_Repeats:18;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:96.0;Spacer_Identity:43.3;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.959;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2144816	2144851	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT1;Parent=SEQF7100.1|CP029546.1_1;Note=ACTCTTGAACTAATAGATTCGACATCTACGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2144852	2144881	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER1;Parent=SEQF7100.1|CP029546.1_1;Note=ACGGCGCTCGCGTTTTTCCTGCCTTGCGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2144882	2144917	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT2;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2144918	2144947	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER2;Parent=SEQF7100.1|CP029546.1_1;Note=CAAATTCGCAAAGCACAAGACGCTGTAGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2144948	2144983	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT3;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2144984	2145013	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER3;Parent=SEQF7100.1|CP029546.1_1;Note=CTCGCAACCCCGAAAAGCTTGAAAAAGCGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2145014	2145049	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT4;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2145050	2145079	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER4;Parent=SEQF7100.1|CP029546.1_1;Note=TGACCCCAGTGACCTATCGCAAGTGGGAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2145080	2145115	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT5;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2145116	2145145	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER5;Parent=SEQF7100.1|CP029546.1_1;Note=CATCACAGATCACCCCAGTCTCTAGACGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2145146	2145181	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT6;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2145182	2145211	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER6;Parent=SEQF7100.1|CP029546.1_1;Note=AAGTTGGATCTCGTAATACCGACCATTCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2145212	2145247	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT7;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2145248	2145277	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER7;Parent=SEQF7100.1|CP029546.1_1;Note=ACCCCCTTGAATGCTAATGTGATAACTACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2145278	2145313	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT8;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2145314	2145343	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER8;Parent=SEQF7100.1|CP029546.1_1;Note=TTATTTGCAACATGTTTCACGCCAGATACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2145344	2145379	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT9;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2145380	2145409	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER9;Parent=SEQF7100.1|CP029546.1_1;Note=CTCTTGAATATATTCACCTACCGCTTTCGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2145410	2145445	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT10;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2145446	2145475	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER10;Parent=SEQF7100.1|CP029546.1_1;Note=CTCTTGAATATATTCACCTACCACTTTCGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2145476	2145511	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT11;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2145512	2145541	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER11;Parent=SEQF7100.1|CP029546.1_1;Note=AGATCGCACTGAGCATCGCTCTCAAGGAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2145542	2145577	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT12;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2145578	2145607	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER12;Parent=SEQF7100.1|CP029546.1_1;Note=AGATCGCACTGAGCATCGCTCTCAAGGAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2145608	2145643	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT13;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2145644	2145673	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER13;Parent=SEQF7100.1|CP029546.1_1;Note=ACAAGTAAACACATTCACGCCCAGCGAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2145674	2145709	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT14;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2145710	2145739	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER14;Parent=SEQF7100.1|CP029546.1_1;Note=CCATACGTTGCGCAACTAAACAATTATGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2145740	2145775	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT15;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2145776	2145805	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER15;Parent=SEQF7100.1|CP029546.1_1;Note=TTCGCAGACGTTGAGAATAATGAATATCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2145806	2145841	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT16;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2145842	2145871	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER16;Parent=SEQF7100.1|CP029546.1_1;Note=AGCACTATCGTTCTATCCGAAGAATGTTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2145872	2145907	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT17;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	binding_site	2145908	2145937	30	+	.	ID=SEQF7100.1|CP029546.1_1_SPACER17;Parent=SEQF7100.1|CP029546.1_1;Note=GACGATCAGTGGCCGACCTTATCCAATGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	direct_repeat	2145938	2145973	36	+	.	ID=SEQF7100.1|CP029546.1_1_REPEAT18;Parent=SEQF7100.1|CP029546.1_1;Note=GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7100.1|CP029546.1	CCTyper	OPERON	2145998	2152141	6144	-	.	ID=SEQF7100.1|CP029546.1@43;Genome_ID=SEQF7100.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_3_CAS-II-A,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II;Positions=2100,2101,2102,2104;E-values=2.50e-71,2.40e-54,4.50e-60,3.20e-160;CoverageSeq=0.969,0.944,0.852,0.749;CoverageHMM=0.995,1.0,0.731,0.975;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7100.1|CP029546.1	CCTyper	CDS	2146955	2147641	229	-	.	ID=SEQF7100.1|CP029546.1_2102_cas;Genome_ID=SEQF7100.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=4.5e-60;Score=200.6;Coverage_Seq=0.851528384279476;Coverage_Hmm=0.730909090909091
SEQF7100.1|CP029546.1	CCTyper	CDS	2146672	2146992	107	-	.	ID=SEQF7100.1|CP029546.1_2101_cas;Genome_ID=SEQF7100.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.3999999999999998e-54;Score=179.3;Coverage_Seq=0.9439252336448598;Coverage_Hmm=1.0
SEQF7100.1|CP029546.1	CCTyper	CDS	2148056	2152141	1362	-	.	ID=SEQF7100.1|CP029546.1_2104_cas;Genome_ID=SEQF7100.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=3.2e-160;Score=532.6;Coverage_Seq=0.748898678414097;Coverage_Hmm=0.9746987951807229
SEQF7100.1|CP029546.1	CCTyper	CDS	2145998	2146675	226	-	.	ID=SEQF7100.1|CP029546.1_2100_cas;Genome_ID=SEQF7100.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=-;E-value=2.5e-71;Score=237.3;Coverage_Seq=0.9690265486725663;Coverage_Hmm=0.9954337899543378