SEQF7284.1|LR822025.1	CCTyper	repeat_region	1042163	1042414	252	+	.	ID=SEQF7284.1|LR822025.1_1;Genome_ID=SEQF7284.1;Note=Predictor:CCtyper;Start:1042163;End:1042414;Consensus_Repeat:GTTTCCGTCCCCTCTCGAGGTAATTAGGTTTATATC;Number_of_Repeats:4;Repeat_Length:36;Average_Spacer_Length:36.0;Repeat_Identity:100.0;Spacer_Identity:42.1;Spacer_Length_Sem:0.6;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.993;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1042163	1042198	36	+	.	ID=SEQF7284.1|LR822025.1_1_REPEAT1;Parent=SEQF7284.1|LR822025.1_1;Note=GTTTCCGTCCCCTCTCGAGGTAATTAGGTTTATATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1042199	1042234	36	+	.	ID=SEQF7284.1|LR822025.1_1_SPACER1;Parent=SEQF7284.1|LR822025.1_1;Note=ATGAAAATTACTAAAGCGATAAATATCCAGCGGACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1042235	1042270	36	+	.	ID=SEQF7284.1|LR822025.1_1_REPEAT2;Parent=SEQF7284.1|LR822025.1_1;Note=GTTTCCGTCCCCTCTCGAGGTAATTAGGTTTATATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1042271	1042305	35	+	.	ID=SEQF7284.1|LR822025.1_1_SPACER2;Parent=SEQF7284.1|LR822025.1_1;Note=TAATTACCGTGGGTATCGCATTAGATTGTGGATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1042306	1042341	36	+	.	ID=SEQF7284.1|LR822025.1_1_REPEAT3;Parent=SEQF7284.1|LR822025.1_1;Note=GTTTCCGTCCCCTCTCGAGGTAATTAGGTTTATATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1042342	1042378	37	+	.	ID=SEQF7284.1|LR822025.1_1_SPACER3;Parent=SEQF7284.1|LR822025.1_1;Note=CGGACTTGAAACCTTCATAGTTGATGAAAACTAGTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1042379	1042414	36	+	.	ID=SEQF7284.1|LR822025.1_1_REPEAT4;Parent=SEQF7284.1|LR822025.1_1;Note=GTTTCCGTCCCCTCTCGAGGTAATTAGGTTTATATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	repeat_region	1257202	1258163	962	+	.	ID=SEQF7284.1|LR822025.1_2;Genome_ID=SEQF7284.1;Note=Predictor:CCtyper;Start:1257202;End:1258163;Consensus_Repeat:GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Number_of_Repeats:15;Repeat_Length:36;Average_Spacer_Length:30.1;Repeat_Identity:97.9;Spacer_Identity:43.1;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.946;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1257202	1257237	36	+	.	ID=SEQF7284.1|LR822025.1_2_REPEAT1;Parent=SEQF7284.1|LR822025.1_2;Note=ACTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1257238	1257267	30	+	.	ID=SEQF7284.1|LR822025.1_2_SPACER1;Parent=SEQF7284.1|LR822025.1_2;Note=CAATTACAACAAACAAGTCAATAACACAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1257268	1257303	36	+	.	ID=SEQF7284.1|LR822025.1_2_REPEAT2;Parent=SEQF7284.1|LR822025.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1257304	1257333	30	+	.	ID=SEQF7284.1|LR822025.1_2_SPACER2;Parent=SEQF7284.1|LR822025.1_2;Note=AATATTCCTTAACACGGTCAGATATTTCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1257334	1257369	36	+	.	ID=SEQF7284.1|LR822025.1_2_REPEAT3;Parent=SEQF7284.1|LR822025.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1257370	1257398	29	+	.	ID=SEQF7284.1|LR822025.1_2_SPACER3;Parent=SEQF7284.1|LR822025.1_2;Note=TGACAGATACTAATGCTACATCTCAAAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1257399	1257434	36	+	.	ID=SEQF7284.1|LR822025.1_2_REPEAT4;Parent=SEQF7284.1|LR822025.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1257435	1257464	30	+	.	ID=SEQF7284.1|LR822025.1_2_SPACER4;Parent=SEQF7284.1|LR822025.1_2;Note=TGCTAAGCGTGCAGGAAAGACCGTAGTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1257465	1257500	36	+	.	ID=SEQF7284.1|LR822025.1_2_REPEAT5;Parent=SEQF7284.1|LR822025.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1257501	1257530	30	+	.	ID=SEQF7284.1|LR822025.1_2_SPACER5;Parent=SEQF7284.1|LR822025.1_2;Note=GGGAATAATACGACATCGTGGTTCCATGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1257531	1257566	36	+	.	ID=SEQF7284.1|LR822025.1_2_REPEAT6;Parent=SEQF7284.1|LR822025.1_2;Note=ATTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1257567	1257596	30	+	.	ID=SEQF7284.1|LR822025.1_2_SPACER6;Parent=SEQF7284.1|LR822025.1_2;Note=TATCTTTGAAACGATAGTCGTCACCTTTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1257597	1257632	36	+	.	ID=SEQF7284.1|LR822025.1_2_REPEAT7;Parent=SEQF7284.1|LR822025.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1257633	1257663	31	+	.	ID=SEQF7284.1|LR822025.1_2_SPACER7;Parent=SEQF7284.1|LR822025.1_2;Note=CCAACTATCTTTCTAAGCGTTTTGTTAGCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1257664	1257699	36	+	.	ID=SEQF7284.1|LR822025.1_2_REPEAT8;Parent=SEQF7284.1|LR822025.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1257700	1257729	30	+	.	ID=SEQF7284.1|LR822025.1_2_SPACER8;Parent=SEQF7284.1|LR822025.1_2;Note=AGCTTCTACTGGCATCCGTGGTAATAGCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1257730	1257765	36	+	.	ID=SEQF7284.1|LR822025.1_2_REPEAT9;Parent=SEQF7284.1|LR822025.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1257766	1257795	30	+	.	ID=SEQF7284.1|LR822025.1_2_SPACER9;Parent=SEQF7284.1|LR822025.1_2;Note=TTTAAATGTCATAGTATAATATCATTAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1257796	1257831	36	+	.	ID=SEQF7284.1|LR822025.1_2_REPEAT10;Parent=SEQF7284.1|LR822025.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1257832	1257861	30	+	.	ID=SEQF7284.1|LR822025.1_2_SPACER10;Parent=SEQF7284.1|LR822025.1_2;Note=ATGATCAGACAAGGCTTTGAGCGCAGAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1257862	1257897	36	+	.	ID=SEQF7284.1|LR822025.1_2_REPEAT11;Parent=SEQF7284.1|LR822025.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1257898	1257927	30	+	.	ID=SEQF7284.1|LR822025.1_2_SPACER11;Parent=SEQF7284.1|LR822025.1_2;Note=CAAATATTGGTGGTGGAGCGTTTGAAACTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1257928	1257963	36	+	.	ID=SEQF7284.1|LR822025.1_2_REPEAT12;Parent=SEQF7284.1|LR822025.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1257964	1257994	31	+	.	ID=SEQF7284.1|LR822025.1_2_SPACER12;Parent=SEQF7284.1|LR822025.1_2;Note=CTCAAAAAAGAAAAGGCGCCTATAAAATTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1257995	1258030	36	+	.	ID=SEQF7284.1|LR822025.1_2_REPEAT13;Parent=SEQF7284.1|LR822025.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1258031	1258060	30	+	.	ID=SEQF7284.1|LR822025.1_2_SPACER13;Parent=SEQF7284.1|LR822025.1_2;Note=AGATTGCGTAATCAAGCGCTTCAATCGTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1258061	1258096	36	+	.	ID=SEQF7284.1|LR822025.1_2_REPEAT14;Parent=SEQF7284.1|LR822025.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	binding_site	1258097	1258127	31	+	.	ID=SEQF7284.1|LR822025.1_2_SPACER14;Parent=SEQF7284.1|LR822025.1_2;Note=CTCAAAAAAGAAAAGGCGCCTATAAAATTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	direct_repeat	1258128	1258163	36	+	.	ID=SEQF7284.1|LR822025.1_2_REPEAT15;Parent=SEQF7284.1|LR822025.1_2;Note=GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7284.1|LR822025.1	CCTyper	OPERON	1258226	1264053	5828	-	.	ID=SEQF7284.1|LR822025.1@23;Genome_ID=SEQF7284.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-C;Best_score=9.0;Genes=Csn2_0_CAS-II-C,Cas2_5_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II;Positions=1287,1288,1289,1290,1291;E-values=6.20e-144,2.10e-09,8.80e-16,3.30e-102,9.40e-193;CoverageSeq=0.991,0.867,0.726,0.908,0.69;CoverageHMM=1.0,0.336,0.388,0.996,0.976;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7284.1|LR822025.1	CCTyper	CDS	1259599	1260510	304	-	.	ID=SEQF7284.1|LR822025.1_1290_cas;Genome_ID=SEQF7284.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.3e-102;Score=338.3;Coverage_Seq=0.9078947368421053;Coverage_Hmm=0.9963636363636363
SEQF7284.1|LR822025.1	CCTyper	CDS	1259275	1259409	45	-	.	ID=SEQF7284.1|LR822025.1_1288_cas;Genome_ID=SEQF7284.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.1e-09;Score=34.5;Coverage_Seq=0.8666666666666667;Coverage_Hmm=0.33620689655172414
SEQF7284.1|LR822025.1	CCTyper	CDS	1259412	1259597	62	-	.	ID=SEQF7284.1|LR822025.1_1289_cas;Genome_ID=SEQF7284.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.8e-16;Score=55.1;Coverage_Seq=0.7258064516129032;Coverage_Hmm=0.3879310344827586
SEQF7284.1|LR822025.1	CCTyper	CDS	1260682	1264053	1124	-	.	ID=SEQF7284.1|LR822025.1_1291_cas;Genome_ID=SEQF7284.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=9.400000000000001e-193;Score=639.7;Coverage_Seq=0.6903914590747331;Coverage_Hmm=0.9759036144578314
SEQF7284.1|LR822025.1	CCTyper	CDS	1258226	1259278	351	-	.	ID=SEQF7284.1|LR822025.1_1287_cas;Genome_ID=SEQF7284.1;Feature_type=CDS;Product=Cas Prediction : Csn2_0_CAS-II-C;coding_strand=-;E-value=6.2e-144;Score=476.1;Coverage_Seq=0.9914529914529915;Coverage_Hmm=1.0