SEQF7335.1|CP040423.1	CCTyper	repeat_region	663222	664379	1158	+	.	ID=SEQF7335.1|CP040423.1_1;Genome_ID=SEQF7335.1;Note=Predictor:CCtyper;Start:663222;End:664379;Consensus_Repeat:GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Number_of_Repeats:18;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:100.0;Spacer_Identity:41.9;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.897;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	663222	663257	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT1;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	663258	663287	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER1;Parent=SEQF7335.1|CP040423.1_1;Note=TGATTAGCTTACTTATTGTTAGGTTGAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	663288	663323	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT2;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	663324	663353	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER2;Parent=SEQF7335.1|CP040423.1_1;Note=ACAGCGGAGCTTGAGAAGTATCTGAATGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	663354	663389	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT3;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	663390	663419	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER3;Parent=SEQF7335.1|CP040423.1_1;Note=GTGAGCAGAAGCGATTTGACTTATCGCTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	663420	663455	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT4;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	663456	663485	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER4;Parent=SEQF7335.1|CP040423.1_1;Note=AATTGACGTTGGTGTGATGAGTGGCTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	663486	663521	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT5;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	663522	663551	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER5;Parent=SEQF7335.1|CP040423.1_1;Note=GAATATATTAAAACATCAGGACAGGGGTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	663552	663587	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT6;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	663588	663617	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER6;Parent=SEQF7335.1|CP040423.1_1;Note=GTCAGACCTCGTCAAGCCATCCATAGCTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	663618	663653	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT7;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	663654	663683	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER7;Parent=SEQF7335.1|CP040423.1_1;Note=GTTGACAACTAAATTTAGATCTGATATACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	663684	663719	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT8;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	663720	663749	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER8;Parent=SEQF7335.1|CP040423.1_1;Note=TTTTATTCTTCGAATTAGTCATGCTATAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	663750	663785	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT9;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	663786	663815	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER9;Parent=SEQF7335.1|CP040423.1_1;Note=TGATCGCCTGCTTTTGTTATCGTCTTCATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	663816	663851	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT10;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	663852	663881	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER10;Parent=SEQF7335.1|CP040423.1_1;Note=AAAAACTAGTTGACAACTTATGATTATAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	663882	663917	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT11;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	663918	663947	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER11;Parent=SEQF7335.1|CP040423.1_1;Note=TTTCTTGTCAAGTACTTTTCTAAAATTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	663948	663983	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT12;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	663984	664013	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER12;Parent=SEQF7335.1|CP040423.1_1;Note=TACAACGCTGCTCTCCCATAAATTCGCACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	664014	664049	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT13;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	664050	664079	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER13;Parent=SEQF7335.1|CP040423.1_1;Note=TCGCCTAAATCTAAACCGTCAATATCTCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	664080	664115	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT14;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	664116	664145	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER14;Parent=SEQF7335.1|CP040423.1_1;Note=GGATGTTATTTTTGAACCGTGTCTACCAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	664146	664181	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT15;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	664182	664211	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER15;Parent=SEQF7335.1|CP040423.1_1;Note=TATTCGTGTTGTGTATTGTTGAGTTGTTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	664212	664247	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT16;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	664248	664277	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER16;Parent=SEQF7335.1|CP040423.1_1;Note=GCTAATATTGTGCTACCAAAGGCGGTGGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	664278	664313	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT17;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	664314	664343	30	+	.	ID=SEQF7335.1|CP040423.1_1_SPACER17;Parent=SEQF7335.1|CP040423.1_1;Note=AATCGTTAAAGAAGTACAGCGCGGTATTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	664344	664379	36	+	.	ID=SEQF7335.1|CP040423.1_1_REPEAT18;Parent=SEQF7335.1|CP040423.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	repeat_region	666277	666906	630	+	.	ID=SEQF7335.1|CP040423.1_2;Genome_ID=SEQF7335.1;Note=Predictor:CCtyper;Start:666277;End:666906;Consensus_Repeat:GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Number_of_Repeats:10;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:96.9;Spacer_Identity:43.0;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.897;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	666277	666312	36	+	.	ID=SEQF7335.1|CP040423.1_2_REPEAT1;Parent=SEQF7335.1|CP040423.1_2;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	666313	666342	30	+	.	ID=SEQF7335.1|CP040423.1_2_SPACER1;Parent=SEQF7335.1|CP040423.1_2;Note=TGATTAGCTTACTTATTGTTAGGTTGAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	666343	666378	36	+	.	ID=SEQF7335.1|CP040423.1_2_REPEAT2;Parent=SEQF7335.1|CP040423.1_2;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	666379	666408	30	+	.	ID=SEQF7335.1|CP040423.1_2_SPACER2;Parent=SEQF7335.1|CP040423.1_2;Note=TCGCCTAATGCTTCATTAAAGCCGTCAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	666409	666444	36	+	.	ID=SEQF7335.1|CP040423.1_2_REPEAT3;Parent=SEQF7335.1|CP040423.1_2;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	666445	666474	30	+	.	ID=SEQF7335.1|CP040423.1_2_SPACER3;Parent=SEQF7335.1|CP040423.1_2;Note=CTTGAAGAGATATTCACTTTGGATTGGCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	666475	666510	36	+	.	ID=SEQF7335.1|CP040423.1_2_REPEAT4;Parent=SEQF7335.1|CP040423.1_2;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	666511	666541	31	+	.	ID=SEQF7335.1|CP040423.1_2_SPACER4;Parent=SEQF7335.1|CP040423.1_2;Note=AATCTTTTACGTGTATAATAAGTGTGCAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	666542	666577	36	+	.	ID=SEQF7335.1|CP040423.1_2_REPEAT5;Parent=SEQF7335.1|CP040423.1_2;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	666578	666607	30	+	.	ID=SEQF7335.1|CP040423.1_2_SPACER5;Parent=SEQF7335.1|CP040423.1_2;Note=AGATGTATTGTTTGAATTATGTAATGTGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	666608	666643	36	+	.	ID=SEQF7335.1|CP040423.1_2_REPEAT6;Parent=SEQF7335.1|CP040423.1_2;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	666644	666673	30	+	.	ID=SEQF7335.1|CP040423.1_2_SPACER6;Parent=SEQF7335.1|CP040423.1_2;Note=GCGTGATAGTAGCTTCTTGTCATACATTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	666674	666709	36	+	.	ID=SEQF7335.1|CP040423.1_2_REPEAT7;Parent=SEQF7335.1|CP040423.1_2;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	666710	666738	29	+	.	ID=SEQF7335.1|CP040423.1_2_SPACER7;Parent=SEQF7335.1|CP040423.1_2;Note=TATGTTCGATGCCATAGCGGAAGGACGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	666739	666774	36	+	.	ID=SEQF7335.1|CP040423.1_2_REPEAT8;Parent=SEQF7335.1|CP040423.1_2;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	666775	666804	30	+	.	ID=SEQF7335.1|CP040423.1_2_SPACER8;Parent=SEQF7335.1|CP040423.1_2;Note=CCAGAAAATAAAAGAGCTGCGAACGGACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	666805	666840	36	+	.	ID=SEQF7335.1|CP040423.1_2_REPEAT9;Parent=SEQF7335.1|CP040423.1_2;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	binding_site	666841	666870	30	+	.	ID=SEQF7335.1|CP040423.1_2_SPACER9;Parent=SEQF7335.1|CP040423.1_2;Note=AGTCAATTAATCGATATGGAATTATTCGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	direct_repeat	666871	666906	36	+	.	ID=SEQF7335.1|CP040423.1_2_REPEAT10;Parent=SEQF7335.1|CP040423.1_2;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCTAAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7335.1|CP040423.1	CCTyper	OPERON	657224	663093	5870	+	.	ID=SEQF7335.1|CP040423.1@21;Genome_ID=SEQF7335.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=633,634,635,636;E-values=0.00e+00,1.30e-96,2.60e-40,1.10e-95;CoverageSeq=0.998,0.934,0.953,0.96;CoverageHMM=0.999,1.0,0.888,0.991;Strand_Interference=1;Strand_Adaptation=1
SEQF7335.1|CP040423.1	CCTyper	CDS	661222	662091	290	+	.	ID=SEQF7335.1|CP040423.1_634_cas;Genome_ID=SEQF7335.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.2999999999999999e-96;Score=319.6;Coverage_Seq=0.9344827586206896;Coverage_Hmm=1.0
SEQF7335.1|CP040423.1	CCTyper	CDS	662118	662435	106	+	.	ID=SEQF7335.1|CP040423.1_635_cas;Genome_ID=SEQF7335.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.6e-40;Score=133.9;Coverage_Seq=0.9528301886792453;Coverage_Hmm=0.8879310344827587
SEQF7335.1|CP040423.1	CCTyper	CDS	657224	661222	1333	+	.	ID=SEQF7335.1|CP040423.1_633_cas;Genome_ID=SEQF7335.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1043.2;Coverage_Seq=0.9977494373593399;Coverage_Hmm=0.9991071428571429
SEQF7335.1|CP040423.1	CCTyper	CDS	662416	663093	226	+	.	ID=SEQF7335.1|CP040423.1_636_cas;Genome_ID=SEQF7335.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=1.1e-95;Score=316.1;Coverage_Seq=0.9601769911504425;Coverage_Hmm=0.9908256880733946