SEQF7338.1|CP040413.1	CCTyper	repeat_region	497580	497814	235	+	.	ID=SEQF7338.1|CP040413.1_1;Genome_ID=SEQF7338.1;Note=Predictor:CCtyper;Start:497580;End:497814;Consensus_Repeat:GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Number_of_Repeats:4;Repeat_Length:36;Average_Spacer_Length:30.3;Repeat_Identity:100.0;Spacer_Identity:41.1;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.812;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	direct_repeat	497580	497615	36	+	.	ID=SEQF7338.1|CP040413.1_1_REPEAT1;Parent=SEQF7338.1|CP040413.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	binding_site	497616	497645	30	+	.	ID=SEQF7338.1|CP040413.1_1_SPACER1;Parent=SEQF7338.1|CP040413.1_1;Note=AAATTTGTAGATGAGATTTTAACGAACGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	direct_repeat	497646	497681	36	+	.	ID=SEQF7338.1|CP040413.1_1_REPEAT2;Parent=SEQF7338.1|CP040413.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	binding_site	497682	497712	31	+	.	ID=SEQF7338.1|CP040413.1_1_SPACER2;Parent=SEQF7338.1|CP040413.1_1;Note=GAGCGATGTGATGAGTGTGGACATCAGCTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	direct_repeat	497713	497748	36	+	.	ID=SEQF7338.1|CP040413.1_1_REPEAT3;Parent=SEQF7338.1|CP040413.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	binding_site	497749	497778	30	+	.	ID=SEQF7338.1|CP040413.1_1_SPACER3;Parent=SEQF7338.1|CP040413.1_1;Note=ACCAGCGTCTTTTGCTGATACCCACGGGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	direct_repeat	497779	497814	36	+	.	ID=SEQF7338.1|CP040413.1_1_REPEAT4;Parent=SEQF7338.1|CP040413.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	repeat_region	690647	691101	455	+	.	ID=SEQF7338.1|CP040413.1_2;Genome_ID=SEQF7338.1;Note=Predictor:CCtyper;Start:690647;End:691101;Consensus_Repeat:GTCTTTCCCGCACACGCGGGGGTGATCC;Number_of_Repeats:8;Repeat_Length:28;Average_Spacer_Length:33.0;Repeat_Identity:90.0;Spacer_Identity:43.3;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.996;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	direct_repeat	690647	690674	28	+	.	ID=SEQF7338.1|CP040413.1_2_REPEAT1;Parent=SEQF7338.1|CP040413.1_2;Note=GTCTTTCCCGCACACGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	binding_site	690675	690707	33	+	.	ID=SEQF7338.1|CP040413.1_2_SPACER1;Parent=SEQF7338.1|CP040413.1_2;Note=TATTTATCATTGTGTTTGAATAATAATTCTGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	direct_repeat	690708	690735	28	+	.	ID=SEQF7338.1|CP040413.1_2_REPEAT2;Parent=SEQF7338.1|CP040413.1_2;Note=GTCTTTCCCGCACACGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	binding_site	690736	690768	33	+	.	ID=SEQF7338.1|CP040413.1_2_SPACER2;Parent=SEQF7338.1|CP040413.1_2;Note=CGAGTTAATCTCTGGCAGAATCTTGGACGCAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	direct_repeat	690769	690796	28	+	.	ID=SEQF7338.1|CP040413.1_2_REPEAT3;Parent=SEQF7338.1|CP040413.1_2;Note=GTCTTTCCCGCACACGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	binding_site	690797	690829	33	+	.	ID=SEQF7338.1|CP040413.1_2_SPACER3;Parent=SEQF7338.1|CP040413.1_2;Note=TGAATTTGCGTCCAGCAAAGCGCCAATCAGTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	direct_repeat	690830	690857	28	+	.	ID=SEQF7338.1|CP040413.1_2_REPEAT4;Parent=SEQF7338.1|CP040413.1_2;Note=GTCTTTCCCGCACACGCGGGGGTAATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	binding_site	690858	690890	33	+	.	ID=SEQF7338.1|CP040413.1_2_SPACER4;Parent=SEQF7338.1|CP040413.1_2;Note=CGTTGAGCGGTTGAACCAATTTTGACTGAAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	direct_repeat	690891	690918	28	+	.	ID=SEQF7338.1|CP040413.1_2_REPEAT5;Parent=SEQF7338.1|CP040413.1_2;Note=GTCTTTCCCGCACACGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	binding_site	690919	690951	33	+	.	ID=SEQF7338.1|CP040413.1_2_SPACER5;Parent=SEQF7338.1|CP040413.1_2;Note=TGATGAGGGGCAGTATCGTTGTGAGTTCAAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	direct_repeat	690952	690979	28	+	.	ID=SEQF7338.1|CP040413.1_2_REPEAT6;Parent=SEQF7338.1|CP040413.1_2;Note=GTCTTTCCCGCACACGCGGGGTTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	binding_site	690980	691012	33	+	.	ID=SEQF7338.1|CP040413.1_2_SPACER6;Parent=SEQF7338.1|CP040413.1_2;Note=CGATAACCAGAATGAAATGCGAAACATGCGAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	direct_repeat	691013	691040	28	+	.	ID=SEQF7338.1|CP040413.1_2_REPEAT7;Parent=SEQF7338.1|CP040413.1_2;Note=GTCTTTCCCGCACACGCGGGGTTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	binding_site	691041	691073	33	+	.	ID=SEQF7338.1|CP040413.1_2_SPACER7;Parent=SEQF7338.1|CP040413.1_2;Note=CCAGGACTTGAAAGATCAAGTAGCGGATTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	direct_repeat	691074	691101	28	+	.	ID=SEQF7338.1|CP040413.1_2_REPEAT8;Parent=SEQF7338.1|CP040413.1_2;Note=GTCTTTCCCGCACACGCGGGAGTAAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7338.1|CP040413.1	CCTyper	OPERON	491603	497543	5941	+	.	ID=SEQF7338.1|CP040413.1@20;Genome_ID=SEQF7338.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_0_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_2_CAS-II-A;Positions=497,498,499,500;E-values=2.40e-132,2.80e-90,1.60e-32,7.00e-43;CoverageSeq=0.743,0.905,0.935,0.991;CoverageHMM=0.954,1.0,0.871,0.997;Strand_Interference=1;Strand_Adaptation=1
SEQF7338.1|CP040413.1	CCTyper	OPERON	681136	690623	9488	+	.	ID=SEQF7338.1|CP040413.1@23;Genome_ID=SEQF7338.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=50%;Best_type=I-E;Best_score=24.0;Genes=Cas3_1_CAS-I,Cas8e_4_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas7_1_CAS-I-E,Cas5_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas1_0_IE,DEDDh_0_CAS-I-II-III-IV-V-VI;Positions=650,651,652,653,654,655,656,657;E-values=1.10e-68,6.70e-93,4.40e-60,4.60e-111,8.10e-41,4.10e-47,2.00e-106,5.90e-34;CoverageSeq=0.603,0.899,0.908,0.903,0.875,0.977,0.851,0.508;CoverageHMM=0.683,0.996,0.975,0.922,0.974,1.0,0.993,0.988;Strand_Interference=1;Strand_Adaptation=1
SEQF7338.1|CP040413.1	CCTyper	CDS	688765	689709	315	+	.	ID=SEQF7338.1|CP040413.1_656_cas;Genome_ID=SEQF7338.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=+;E-value=2e-106;Score=351.7;Coverage_Seq=0.8507936507936508;Coverage_Hmm=0.9925650557620818
SEQF7338.1|CP040413.1	CCTyper	CDS	495275	496189	305	+	.	ID=SEQF7338.1|CP040413.1_498_cas;Genome_ID=SEQF7338.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.8e-90;Score=298.9;Coverage_Seq=0.9049180327868852;Coverage_Hmm=1.0
SEQF7338.1|CP040413.1	CCTyper	CDS	496186	496509	108	+	.	ID=SEQF7338.1|CP040413.1_499_cas;Genome_ID=SEQF7338.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.6e-32;Score=108.8;Coverage_Seq=0.9351851851851852;Coverage_Hmm=0.8706896551724138
SEQF7338.1|CP040413.1	CCTyper	CDS	681136	684000	955	+	.	ID=SEQF7338.1|CP040413.1_650_cas;Genome_ID=SEQF7338.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=+;E-value=1.1e-68;Score=228.9;Coverage_Seq=0.6031413612565445;Coverage_Hmm=0.6832214765100671
SEQF7338.1|CP040413.1	CCTyper	CDS	687400	688119	240	+	.	ID=SEQF7338.1|CP040413.1_654_cas;Genome_ID=SEQF7338.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IE;coding_strand=+;E-value=8.099999999999999e-41;Score=136.8;Coverage_Seq=0.875;Coverage_Hmm=0.9739130434782609
SEQF7338.1|CP040413.1	CCTyper	CDS	688134	688775	214	+	.	ID=SEQF7338.1|CP040413.1_655_cas;Genome_ID=SEQF7338.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=4.1e-47;Score=157.8;Coverage_Seq=0.9766355140186916;Coverage_Hmm=1.0
SEQF7338.1|CP040413.1	CCTyper	CDS	686313	687389	359	+	.	ID=SEQF7338.1|CP040413.1_653_cas;Genome_ID=SEQF7338.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=+;E-value=4.6e-111;Score=368.4;Coverage_Seq=0.9025069637883009;Coverage_Hmm=0.9220055710306406
SEQF7338.1|CP040413.1	CCTyper	CDS	683993	685678	562	+	.	ID=SEQF7338.1|CP040413.1_651_cas;Genome_ID=SEQF7338.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=+;E-value=6.7e-93;Score=308.8;Coverage_Seq=0.8985765124555161;Coverage_Hmm=0.9956989247311828
SEQF7338.1|CP040413.1	CCTyper	CDS	491603	495055	1151	+	.	ID=SEQF7338.1|CP040413.1_497_cas;Genome_ID=SEQF7338.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=2.3999999999999998e-132;Score=439.6;Coverage_Seq=0.7428323197219809;Coverage_Hmm=0.9542168674698795
SEQF7338.1|CP040413.1	CCTyper	CDS	685692	686309	206	+	.	ID=SEQF7338.1|CP040413.1_652_cas;Genome_ID=SEQF7338.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=+;E-value=4.4000000000000003e-60;Score=199.4;Coverage_Seq=0.9077669902912622;Coverage_Hmm=0.9748743718592965
SEQF7338.1|CP040413.1	CCTyper	CDS	496509	497543	345	+	.	ID=SEQF7338.1|CP040413.1_500_cas;Genome_ID=SEQF7338.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=+;E-value=7e-43;Score=143.5;Coverage_Seq=0.991304347826087;Coverage_Hmm=0.9970845481049563
SEQF7338.1|CP040413.1	CCTyper	CDS	689715	690623	303	+	.	ID=SEQF7338.1|CP040413.1_657_cas;Genome_ID=SEQF7338.1;Feature_type=CDS;Product=Cas Prediction : DEDDh_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=5.9e-34;Score=114.2;Coverage_Seq=0.5082508250825083;Coverage_Hmm=0.9875