SEQF7346.1|CP040410.1	CCTyper	repeat_region	638406	639694	1289	+	.	ID=SEQF7346.1|CP040410.1_1;Genome_ID=SEQF7346.1;Note=Predictor:CCtyper;Start:638406;End:639694;Consensus_Repeat:GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Number_of_Repeats:20;Repeat_Length:36;Average_Spacer_Length:29.9;Repeat_Identity:96.8;Spacer_Identity:40.7;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.897;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	638406	638441	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT1;Parent=SEQF7346.1|CP040410.1_1;Note=AATTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	638442	638471	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER1;Parent=SEQF7346.1|CP040410.1_1;Note=TAACCAACACCTGCATTAAACAATAATTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	638472	638507	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT2;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	638508	638537	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER2;Parent=SEQF7346.1|CP040410.1_1;Note=TTGCTGGAGAAAGAGTTCGATTTATACGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	638538	638573	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT3;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	638574	638603	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER3;Parent=SEQF7346.1|CP040410.1_1;Note=TTTCCATCTTCTCAGCATAATCAAGCAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	638604	638639	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT4;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	638640	638669	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER4;Parent=SEQF7346.1|CP040410.1_1;Note=TTGCCATGTGGTCATTGAACTCATCAAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	638670	638705	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT5;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	638706	638735	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER5;Parent=SEQF7346.1|CP040410.1_1;Note=AGATACTTGGCGGGGCGATTACGTTTCTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	638736	638771	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT6;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	638772	638801	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER6;Parent=SEQF7346.1|CP040410.1_1;Note=TGGTATGACGACCATGCGGATTATAATACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	638802	638837	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT7;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	638838	638867	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER7;Parent=SEQF7346.1|CP040410.1_1;Note=TCTAGCAGATCGTTTCGAAACATTTAAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	638868	638903	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT8;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	638904	638933	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER8;Parent=SEQF7346.1|CP040410.1_1;Note=CCCTGTGCCCCCTTACTGTGGTGGTGACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	638934	638969	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT9;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	638970	638999	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER9;Parent=SEQF7346.1|CP040410.1_1;Note=CCCACTCCTCCATTTTTTGAATGGTAAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	639000	639035	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT10;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	639036	639065	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER10;Parent=SEQF7346.1|CP040410.1_1;Note=TGCTTCTGGTGGACAAATCGGACGTTACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	639066	639101	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT11;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	639102	639131	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER11;Parent=SEQF7346.1|CP040410.1_1;Note=AGAAGTCCCTTGACTCCTTCGCTTCTTCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	639132	639167	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT12;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	639168	639197	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER12;Parent=SEQF7346.1|CP040410.1_1;Note=TTTTTTTCTAGAGTTCACTCTCAACACCCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	639198	639233	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT13;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	639234	639263	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER13;Parent=SEQF7346.1|CP040410.1_1;Note=GTACTTGTCACCCCAATAATATCCGCCAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	639264	639299	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT14;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	639300	639329	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER14;Parent=SEQF7346.1|CP040410.1_1;Note=TCGCTTAAGACCTCTTTCATTTCTTTACCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	639330	639365	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT15;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	639366	639395	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER15;Parent=SEQF7346.1|CP040410.1_1;Note=CGTTAACATTGTATAAATCATATCGTCCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	639396	639431	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT16;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	639432	639461	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER16;Parent=SEQF7346.1|CP040410.1_1;Note=GCAATCGGCAACAAACTAATTCAATCTGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	639462	639497	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT17;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	639498	639527	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER17;Parent=SEQF7346.1|CP040410.1_1;Note=TTTAAATTTCCCATCCAGTTTCTTCTAAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	639528	639563	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT18;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAACAACACAGCTCTAAAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	639564	639592	29	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER18;Parent=SEQF7346.1|CP040410.1_1;Note=TGTACTCGGGTTGATTCCATTCCATTGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	639593	639628	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT19;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	binding_site	639629	639658	30	+	.	ID=SEQF7346.1|CP040410.1_1_SPACER19;Parent=SEQF7346.1|CP040410.1_1;Note=CCATCTTTCCGTATCCATGCGTCACCTTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	direct_repeat	639659	639694	36	+	.	ID=SEQF7346.1|CP040410.1_1_REPEAT20;Parent=SEQF7346.1|CP040410.1_1;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7346.1|CP040410.1	CCTyper	OPERON	639822	645691	5870	-	.	ID=SEQF7346.1|CP040410.1@12;Genome_ID=SEQF7346.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=604,605,606,607;E-values=1.00e-96,2.00e-46,1.60e-97,0.00e+00;CoverageSeq=0.96,0.957,0.934,0.998;CoverageHMM=0.991,0.983,1.0,0.999;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7346.1|CP040410.1	CCTyper	CDS	640824	641693	290	-	.	ID=SEQF7346.1|CP040410.1_606_cas;Genome_ID=SEQF7346.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.6e-97;Score=322.7;Coverage_Seq=0.9344827586206896;Coverage_Hmm=1.0
SEQF7346.1|CP040410.1	CCTyper	CDS	640480	640827	116	-	.	ID=SEQF7346.1|CP040410.1_605_cas;Genome_ID=SEQF7346.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2e-46;Score=153.7;Coverage_Seq=0.9568965517241379;Coverage_Hmm=0.9827586206896551
SEQF7346.1|CP040410.1	CCTyper	CDS	641693	645691	1333	-	.	ID=SEQF7346.1|CP040410.1_607_cas;Genome_ID=SEQF7346.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1048.4;Coverage_Seq=0.9977494373593399;Coverage_Hmm=0.9991071428571429
SEQF7346.1|CP040410.1	CCTyper	CDS	639822	640499	226	-	.	ID=SEQF7346.1|CP040410.1_604_cas;Genome_ID=SEQF7346.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=1e-96;Score=319.5;Coverage_Seq=0.9601769911504425;Coverage_Hmm=0.9908256880733946