SEQF7349.1|CP040411.1	CCTyper	repeat_region	274392	276078	1687	+	.	ID=SEQF7349.1|CP040411.1_1;Genome_ID=SEQF7349.1;Note=Predictor:CCtyper;Start:274392;End:276078;Consensus_Repeat:GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Number_of_Repeats:26;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:100.0;Spacer_Identity:41.9;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.897;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	274392	274427	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT1;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	274428	274457	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER1;Parent=SEQF7349.1|CP040411.1_1;Note=GAATGATCCTTTTTCACTCTTGTCTCCATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	274458	274493	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT2;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	274494	274523	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER2;Parent=SEQF7349.1|CP040411.1_1;Note=TTTATTAAATAGATTTAAGTGGGATAGGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	274524	274559	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT3;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	274560	274589	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER3;Parent=SEQF7349.1|CP040411.1_1;Note=ATACACTTAGCTAGGAAGGAGTTGGTGCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	274590	274625	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT4;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	274626	274655	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER4;Parent=SEQF7349.1|CP040411.1_1;Note=TGATGAATATGAAAACACACTACACAATGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	274656	274691	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT5;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	274692	274721	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER5;Parent=SEQF7349.1|CP040411.1_1;Note=CTCATTGATGTTTGAACAATCGTAGTTGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	274722	274757	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT6;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	274758	274787	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER6;Parent=SEQF7349.1|CP040411.1_1;Note=AGCATGAATTTCACACCTGCGTCCAAAGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	274788	274823	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT7;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	274824	274853	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER7;Parent=SEQF7349.1|CP040411.1_1;Note=TCCTGCTTCATATCTGAATAAGTTAAAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	274854	274889	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT8;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	274890	274919	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER8;Parent=SEQF7349.1|CP040411.1_1;Note=CGGCCAGAGATTAAAGAGGATTACCTCAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	274920	274955	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT9;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	274956	274985	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER9;Parent=SEQF7349.1|CP040411.1_1;Note=CTTTTGATGAATTTAATGACCATATGGCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	274986	275021	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT10;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	275022	275051	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER10;Parent=SEQF7349.1|CP040411.1_1;Note=TCAAAGCTAAGTCTTTCGCCCAATCCACGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	275052	275087	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT11;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	275088	275117	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER11;Parent=SEQF7349.1|CP040411.1_1;Note=TGCATCATGTCGAAGATGAACAGATTAGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	275118	275153	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT12;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	275154	275183	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER12;Parent=SEQF7349.1|CP040411.1_1;Note=CAACTCTTGGCGTATCTCGTCACTAACAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	275184	275219	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT13;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	275220	275249	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER13;Parent=SEQF7349.1|CP040411.1_1;Note=TCAATGCATGGAAGAAGATGTGGGAGCTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	275250	275285	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT14;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	275286	275315	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER14;Parent=SEQF7349.1|CP040411.1_1;Note=AATTATTTGTGGCATTGAATAGTGCAGAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	275316	275351	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT15;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	275352	275381	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER15;Parent=SEQF7349.1|CP040411.1_1;Note=CGTAGACGGTGTTATCTCAATTAAAATCGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	275382	275417	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT16;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	275418	275447	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER16;Parent=SEQF7349.1|CP040411.1_1;Note=ACACGCAAGTACACTGATTGGGTTCTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	275448	275483	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT17;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	275484	275513	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER17;Parent=SEQF7349.1|CP040411.1_1;Note=CGTATTATAATCTGCGTGGTCGTCATACCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	275514	275549	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT18;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	275550	275579	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER18;Parent=SEQF7349.1|CP040411.1_1;Note=GAGCGCATTTGAAGTTGCTCAATCCCAAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	275580	275615	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT19;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	275616	275645	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER19;Parent=SEQF7349.1|CP040411.1_1;Note=TGAGTTATTAACCAATAGACTGGATCACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	275646	275681	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT20;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	275682	275711	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER20;Parent=SEQF7349.1|CP040411.1_1;Note=AGGTATCTTAATGTTCCCTGAACGCGTAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	275712	275747	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT21;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	275748	275777	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER21;Parent=SEQF7349.1|CP040411.1_1;Note=CCTTCAATGGTTTAGGATTATCATCCGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	275778	275813	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT22;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	275814	275843	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER22;Parent=SEQF7349.1|CP040411.1_1;Note=AAAGTGTATCGGCTGTTTTCTAAGTTAGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	275844	275879	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT23;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	275880	275909	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER23;Parent=SEQF7349.1|CP040411.1_1;Note=AAAGTGTATCGGCTGTTTTCTAAGTTAGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	275910	275945	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT24;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	275946	275976	31	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER24;Parent=SEQF7349.1|CP040411.1_1;Note=TCTTCCCGACAAACGATGCGAATAAGGCGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	275977	276012	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT25;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	binding_site	276013	276042	30	+	.	ID=SEQF7349.1|CP040411.1_1_SPACER25;Parent=SEQF7349.1|CP040411.1_1;Note=TTGTGCAGAACAGAGGGCTTCCCGGAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	direct_repeat	276043	276078	36	+	.	ID=SEQF7349.1|CP040411.1_1_REPEAT26;Parent=SEQF7349.1|CP040411.1_1;Note=GTTTTAGAGCTGTGTTGTTTTGAATGACTCTAAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7349.1|CP040411.1	CCTyper	OPERON	268395	274264	5870	+	.	ID=SEQF7349.1|CP040411.1@6;Genome_ID=SEQF7349.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=265,266,267,268;E-values=0.00e+00,6.00e-97,2.00e-46,1.20e-95;CoverageSeq=0.998,0.934,0.957,0.96;CoverageHMM=0.999,1.0,0.983,0.991;Strand_Interference=1;Strand_Adaptation=1
SEQF7349.1|CP040411.1	CCTyper	CDS	272393	273262	290	+	.	ID=SEQF7349.1|CP040411.1_266_cas;Genome_ID=SEQF7349.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=5.999999999999999e-97;Score=320.8;Coverage_Seq=0.9344827586206896;Coverage_Hmm=1.0
SEQF7349.1|CP040411.1	CCTyper	CDS	273259	273606	116	+	.	ID=SEQF7349.1|CP040411.1_267_cas;Genome_ID=SEQF7349.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2e-46;Score=153.7;Coverage_Seq=0.9568965517241379;Coverage_Hmm=0.9827586206896551
SEQF7349.1|CP040411.1	CCTyper	CDS	268395	272393	1333	+	.	ID=SEQF7349.1|CP040411.1_265_cas;Genome_ID=SEQF7349.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1038.0;Coverage_Seq=0.9977494373593399;Coverage_Hmm=0.9991071428571429
SEQF7349.1|CP040411.1	CCTyper	CDS	273587	274264	226	+	.	ID=SEQF7349.1|CP040411.1_268_cas;Genome_ID=SEQF7349.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=1.1999999999999999e-95;Score=316.0;Coverage_Seq=0.9601769911504425;Coverage_Hmm=0.9908256880733946
