SEQF7357.1|NAQX01000002.1	CCTyper	repeat_region	90271	91098	828	+	.	ID=SEQF7357.1|NAQX01000002.1_1;Genome_ID=SEQF7357.1;Note=Predictor:CCtyper;Start:90271;End:91098;Consensus_Repeat:GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Number_of_Repeats:13;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:100.0;Spacer_Identity:41.5;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.812;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	direct_repeat	90271	90306	36	+	.	ID=SEQF7357.1|NAQX01000002.1_1_REPEAT1;Parent=SEQF7357.1|NAQX01000002.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	binding_site	90307	90336	30	+	.	ID=SEQF7357.1|NAQX01000002.1_1_SPACER1;Parent=SEQF7357.1|NAQX01000002.1_1;Note=AAAAATGTACGTGGTGGGGCTACTTCACGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	direct_repeat	90337	90372	36	+	.	ID=SEQF7357.1|NAQX01000002.1_1_REPEAT2;Parent=SEQF7357.1|NAQX01000002.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	binding_site	90373	90402	30	+	.	ID=SEQF7357.1|NAQX01000002.1_1_SPACER2;Parent=SEQF7357.1|NAQX01000002.1_1;Note=CTTGCATCACAAGAGCGCGCAAACGGCTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	direct_repeat	90403	90438	36	+	.	ID=SEQF7357.1|NAQX01000002.1_1_REPEAT3;Parent=SEQF7357.1|NAQX01000002.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	binding_site	90439	90468	30	+	.	ID=SEQF7357.1|NAQX01000002.1_1_SPACER3;Parent=SEQF7357.1|NAQX01000002.1_1;Note=AAGCACCGTATCCAACGCTTAGGCCAGACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	direct_repeat	90469	90504	36	+	.	ID=SEQF7357.1|NAQX01000002.1_1_REPEAT4;Parent=SEQF7357.1|NAQX01000002.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	binding_site	90505	90534	30	+	.	ID=SEQF7357.1|NAQX01000002.1_1_SPACER4;Parent=SEQF7357.1|NAQX01000002.1_1;Note=AAATCATCTATCTTTTCTTGTTGTTCAGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	direct_repeat	90535	90570	36	+	.	ID=SEQF7357.1|NAQX01000002.1_1_REPEAT5;Parent=SEQF7357.1|NAQX01000002.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	binding_site	90571	90600	30	+	.	ID=SEQF7357.1|NAQX01000002.1_1_SPACER5;Parent=SEQF7357.1|NAQX01000002.1_1;Note=GAATTAAGAGAGCGTATGATTGCGAAAGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	direct_repeat	90601	90636	36	+	.	ID=SEQF7357.1|NAQX01000002.1_1_REPEAT6;Parent=SEQF7357.1|NAQX01000002.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	binding_site	90637	90666	30	+	.	ID=SEQF7357.1|NAQX01000002.1_1_SPACER6;Parent=SEQF7357.1|NAQX01000002.1_1;Note=TGCAAGGAATAACAACATATCTGACCATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	direct_repeat	90667	90702	36	+	.	ID=SEQF7357.1|NAQX01000002.1_1_REPEAT7;Parent=SEQF7357.1|NAQX01000002.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	binding_site	90703	90732	30	+	.	ID=SEQF7357.1|NAQX01000002.1_1_SPACER7;Parent=SEQF7357.1|NAQX01000002.1_1;Note=AGAAAATGATGAATCTTTATAAGTATTCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	direct_repeat	90733	90768	36	+	.	ID=SEQF7357.1|NAQX01000002.1_1_REPEAT8;Parent=SEQF7357.1|NAQX01000002.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	binding_site	90769	90798	30	+	.	ID=SEQF7357.1|NAQX01000002.1_1_SPACER8;Parent=SEQF7357.1|NAQX01000002.1_1;Note=TGTTTTGACTCCTCCGCTTTGGAACGTGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	direct_repeat	90799	90834	36	+	.	ID=SEQF7357.1|NAQX01000002.1_1_REPEAT9;Parent=SEQF7357.1|NAQX01000002.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	binding_site	90835	90864	30	+	.	ID=SEQF7357.1|NAQX01000002.1_1_SPACER9;Parent=SEQF7357.1|NAQX01000002.1_1;Note=CGAGAAATCCTTTCTTACATCTGCACCATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	direct_repeat	90865	90900	36	+	.	ID=SEQF7357.1|NAQX01000002.1_1_REPEAT10;Parent=SEQF7357.1|NAQX01000002.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	binding_site	90901	90930	30	+	.	ID=SEQF7357.1|NAQX01000002.1_1_SPACER10;Parent=SEQF7357.1|NAQX01000002.1_1;Note=CCAAAGAATAAAGACTTTAAATTCTTAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	direct_repeat	90931	90966	36	+	.	ID=SEQF7357.1|NAQX01000002.1_1_REPEAT11;Parent=SEQF7357.1|NAQX01000002.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	binding_site	90967	90996	30	+	.	ID=SEQF7357.1|NAQX01000002.1_1_SPACER11;Parent=SEQF7357.1|NAQX01000002.1_1;Note=TTGCTTACGTGAACGTAATCGTTAGTTACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	direct_repeat	90997	91032	36	+	.	ID=SEQF7357.1|NAQX01000002.1_1_REPEAT12;Parent=SEQF7357.1|NAQX01000002.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	binding_site	91033	91062	30	+	.	ID=SEQF7357.1|NAQX01000002.1_1_SPACER12;Parent=SEQF7357.1|NAQX01000002.1_1;Note=ATGAGCAAGGCAACCTGCCACCGTCATCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	direct_repeat	91063	91098	36	+	.	ID=SEQF7357.1|NAQX01000002.1_1_REPEAT13;Parent=SEQF7357.1|NAQX01000002.1_1;Note=GTTTTTGTACTCTCAATAATTTCCTATCACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000004.1	CCTyper	repeat_region	2	169	168	+	.	ID=SEQF7357.1|NAQX01000004.1_2;Genome_ID=SEQF7357.1;Note=Predictor:CCtyper;Start:2;End:169;Consensus_Repeat:GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Number_of_Repeats:3;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:100.0;Spacer_Identity:39.5;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.897;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000004.1	CCTyper	direct_repeat	2	37	36	+	.	ID=SEQF7357.1|NAQX01000004.1_2_REPEAT1;Parent=SEQF7357.1|NAQX01000004.1_2;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000004.1	CCTyper	binding_site	38	67	30	+	.	ID=SEQF7357.1|NAQX01000004.1_2_SPACER1;Parent=SEQF7357.1|NAQX01000004.1_2;Note=AGTATTGGATGCGAAAGAAGAAAAATCAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000004.1	CCTyper	direct_repeat	68	103	36	+	.	ID=SEQF7357.1|NAQX01000004.1_2_REPEAT2;Parent=SEQF7357.1|NAQX01000004.1_2;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000004.1	CCTyper	binding_site	104	133	30	+	.	ID=SEQF7357.1|NAQX01000004.1_2_SPACER2;Parent=SEQF7357.1|NAQX01000004.1_2;Note=GTTCATACCGTATAACATCACATTAATCGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000004.1	CCTyper	direct_repeat	134	169	36	+	.	ID=SEQF7357.1|NAQX01000004.1_2_REPEAT3;Parent=SEQF7357.1|NAQX01000004.1_2;Note=GTTTTGGAGTCATTCAAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000055.1	CCTyper	repeat_region	273195	273356	162	+	.	ID=SEQF7357.1|NAQX01000055.1_3;Genome_ID=SEQF7357.1;Note=Predictor:CCtyper;Start:273195;End:273356;Consensus_Repeat:GAGTCATTCAAAACAACACAGCTCTAAAA;Number_of_Repeats:3;Repeat_Length:29;Average_Spacer_Length:37.5;Repeat_Identity:100.0;Spacer_Identity:56.2;Spacer_Length_Sem:0.5;Trusted:False;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.846;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000055.1	CCTyper	direct_repeat	273195	273223	29	+	.	ID=SEQF7357.1|NAQX01000055.1_3_REPEAT1;Parent=SEQF7357.1|NAQX01000055.1_3;Note=GAGTCATTCAAAACAACACAGCTCTAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000055.1	CCTyper	binding_site	273224	273261	38	+	.	ID=SEQF7357.1|NAQX01000055.1_3_SPACER1;Parent=SEQF7357.1|NAQX01000055.1_3;Note=CGCTGATGAATGGTCGATCCGGGTTGACTTGGGTTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000055.1	CCTyper	direct_repeat	273262	273290	29	+	.	ID=SEQF7357.1|NAQX01000055.1_3_REPEAT2;Parent=SEQF7357.1|NAQX01000055.1_3;Note=GAGTCATTCAAAACAACACAGCTCTAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000055.1	CCTyper	binding_site	273291	273327	37	+	.	ID=SEQF7357.1|NAQX01000055.1_3_SPACER2;Parent=SEQF7357.1|NAQX01000055.1_3;Note=CTGACGAAGCAGCTTCATTTTAGCACATTTGGTTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000055.1	CCTyper	direct_repeat	273328	273356	29	+	.	ID=SEQF7357.1|NAQX01000055.1_3_REPEAT3;Parent=SEQF7357.1|NAQX01000055.1_3;Note=GAGTCATTCAAAACAACACAGCTCTAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7357.1|NAQX01000002.1	CCTyper	OPERON	84294	90234	5941	+	.	ID=SEQF7357.1|NAQX01000002.1@3;Genome_ID=SEQF7357.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_0_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_2_CAS-II-A;Positions=79,80,81,82;E-values=1.90e-132,2.90e-90,1.60e-32,5.80e-43;CoverageSeq=0.671,0.905,0.935,0.991;CoverageHMM=0.954,1.0,0.871,0.997;Strand_Interference=1;Strand_Adaptation=1
SEQF7357.1|NAQX01000004.1	CCTyper	OPERON	297	6166	5870	-	.	ID=SEQF7357.1|NAQX01000004.1@1;Genome_ID=SEQF7357.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=1,2,3,4;E-values=8.50e-96,1.90e-46,5.80e-97,0.00e+00;CoverageSeq=0.96,0.957,0.934,0.998;CoverageHMM=0.991,0.983,1.0,0.999;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7357.1|NAQX01000002.1	CCTyper	CDS	87966	88880	305	+	.	ID=SEQF7357.1|NAQX01000002.1_80_cas;Genome_ID=SEQF7357.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.9e-90;Score=298.9;Coverage_Seq=0.9049180327868852;Coverage_Hmm=1.0
SEQF7357.1|NAQX01000004.1	CCTyper	CDS	1299	2168	290	-	.	ID=SEQF7357.1|NAQX01000004.1_3_cas;Genome_ID=SEQF7357.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=5.8e-97;Score=320.8;Coverage_Seq=0.9344827586206896;Coverage_Hmm=1.0
SEQF7357.1|NAQX01000002.1	CCTyper	CDS	88877	89200	108	+	.	ID=SEQF7357.1|NAQX01000002.1_81_cas;Genome_ID=SEQF7357.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.6e-32;Score=108.8;Coverage_Seq=0.9351851851851852;Coverage_Hmm=0.8706896551724138
SEQF7357.1|NAQX01000004.1	CCTyper	CDS	955	1302	116	-	.	ID=SEQF7357.1|NAQX01000004.1_2_cas;Genome_ID=SEQF7357.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.9e-46;Score=153.7;Coverage_Seq=0.9568965517241379;Coverage_Hmm=0.9827586206896551
SEQF7357.1|NAQX01000002.1	CCTyper	CDS	84294	87746	1151	+	.	ID=SEQF7357.1|NAQX01000002.1_79_cas;Genome_ID=SEQF7357.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=1.9e-132;Score=440.0;Coverage_Seq=0.6707211120764552;Coverage_Hmm=0.9542168674698795
SEQF7357.1|NAQX01000004.1	CCTyper	CDS	2168	6166	1333	-	.	ID=SEQF7357.1|NAQX01000004.1_4_cas;Genome_ID=SEQF7357.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1033.3;Coverage_Seq=0.9977494373593399;Coverage_Hmm=0.9991071428571429
SEQF7357.1|NAQX01000004.1	CCTyper	CDS	297	974	226	-	.	ID=SEQF7357.1|NAQX01000004.1_1_cas;Genome_ID=SEQF7357.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=8.5e-96;Score=316.5;Coverage_Seq=0.9601769911504425;Coverage_Hmm=0.9908256880733946
SEQF7357.1|NAQX01000002.1	CCTyper	CDS	89200	90234	345	+	.	ID=SEQF7357.1|NAQX01000002.1_82_cas;Genome_ID=SEQF7357.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=+;E-value=5.7999999999999995e-43;Score=143.8;Coverage_Seq=0.991304347826087;Coverage_Hmm=0.9970845481049563