SEQF7411.1|JACHMA010000001.1	CCTyper	repeat_region	1298441	1299446	1006	+	.	ID=SEQF7411.1|JACHMA010000001.1_1;Genome_ID=SEQF7411.1;Note=Predictor:CCtyper;Start:1298441;End:1299446;Consensus_Repeat:GGAATTACCCCCGCTGGCGCGGGGAAAAC;Number_of_Repeats:17;Repeat_Length:29;Average_Spacer_Length:32.1;Repeat_Identity:98.7;Spacer_Identity:40.2;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:IV-A3;Subtype_Probability:0.694;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1298441	1298469	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT1;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACTCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	binding_site	1298470	1298501	32	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_SPACER1;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=TAATCAAGCTTCACATAGTGGGTATTTGTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1298502	1298530	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT2;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACCCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	binding_site	1298531	1298562	32	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_SPACER2;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGGTAGTATTCGACGATAGCGGGCTTGTCTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1298563	1298591	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT3;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACCCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	binding_site	1298592	1298623	32	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_SPACER3;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GAGGAGCAGATAAAGAACCTTTCAGAACGCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1298624	1298652	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT4;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACCCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	binding_site	1298653	1298684	32	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_SPACER4;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=CCGGAAGTAACTCCCCAGGCACACTTCGACCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1298685	1298713	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT5;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACCCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	binding_site	1298714	1298745	32	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_SPACER5;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=CTTCTCGGTGGTGCACCGGGGAGCGACCCCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1298746	1298774	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT6;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACCCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	binding_site	1298775	1298806	32	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_SPACER6;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GTCTTGGTATAGGCTACCGGAGCCGAGTGCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1298807	1298835	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT7;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACCCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	binding_site	1298836	1298868	33	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_SPACER7;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=CACCAACGAAGCTATCCTGAAAAGGCTACTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1298869	1298897	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT8;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACCCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	binding_site	1298898	1298929	32	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_SPACER8;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=AAAAGGTTCGCTGCTGGCCCATCTACCGGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1298930	1298958	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT9;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACCCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	binding_site	1298959	1298990	32	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_SPACER9;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=TCGCGTTGGTTGCCCTCCCTGTCTGTCCATGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1298991	1299019	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT10;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACCCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	binding_site	1299020	1299051	32	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_SPACER10;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=TTGGTGATTTCTTTGGCGGGGCGGGTAGTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1299052	1299080	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT11;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACCCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	binding_site	1299081	1299112	32	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_SPACER11;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=TGGTCTATCACCAGGCTTATCTGCATCTCTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1299113	1299141	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT12;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACCCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	binding_site	1299142	1299173	32	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_SPACER12;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=TGGACTGGAAGGAAACCTTGCCGTCCCTATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1299174	1299202	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT13;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACCCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	binding_site	1299203	1299234	32	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_SPACER13;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=TTTCTCCAGGCTAGACGCTATCTCTTTTAGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1299235	1299263	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT14;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACCCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	binding_site	1299264	1299295	32	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_SPACER14;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=TCCCCGAGGAGGTCTTGCGTCTGGGTGATTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1299296	1299324	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT15;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACCCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	binding_site	1299325	1299356	32	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_SPACER15;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=TGGTTGAGTGTTAGTTTCATGTCGTCATACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1299357	1299385	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT16;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACCCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	binding_site	1299386	1299417	32	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_SPACER16;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GTTTCATTGTGGTTTTCTCCTTGTAAATATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	direct_repeat	1299418	1299446	29	+	.	ID=SEQF7411.1|JACHMA010000001.1_1_REPEAT17;Parent=SEQF7411.1|JACHMA010000001.1_1;Note=GGAATTACCCCCGCTGGCGCGGGGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7411.1|JACHMA010000001.1	CCTyper	OPERON	1299471	1308304	8834	-	.	ID=SEQF7411.1|JACHMA010000001.1@24;Genome_ID=SEQF7411.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=26.0;Genes=Cas2_10_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas3_0_CAS-I,Cas6e_1_CAS-I-II-III-IV-V-VI,Cas8e_3_CAS-I-E,Cse2gr11_3_CAS-I-E,Cas7_1_CAS-I-E,Cas5_0_CAS-I-E;Positions=1150,1151,1152,1153,1154,1155,1156,1157;E-values=1.20e-21,1.00e-64,2.70e-58,6.80e-28,8.00e-64,1.80e-67,3.10e-73,4.10e-33;CoverageSeq=0.878,0.85,0.4,0.888,0.759,0.96,0.884,0.695;CoverageHMM=0.988,0.978,0.907,0.92,0.788,0.961,0.916,0.901;Strand_Interference=0;Strand_Adaptation=-1
SEQF7411.1|JACHMA010000001.1	CCTyper	CDS	1299786	1300724	313	-	.	ID=SEQF7411.1|JACHMA010000001.1_1151_cas;Genome_ID=SEQF7411.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=1e-64;Score=215.3;Coverage_Seq=0.8498402555910544;Coverage_Hmm=0.9776951672862454
SEQF7411.1|JACHMA010000001.1	CCTyper	CDS	1299471	1299764	98	-	.	ID=SEQF7411.1|JACHMA010000001.1_1150_cas;Genome_ID=SEQF7411.1;Feature_type=CDS;Product=Cas Prediction : Cas2_10_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.2e-21;Score=73.6;Coverage_Seq=0.8775510204081632;Coverage_Hmm=0.9883720930232558
SEQF7411.1|JACHMA010000001.1	CCTyper	CDS	1300721	1303444	908	-	.	ID=SEQF7411.1|JACHMA010000001.1_1152_cas;Genome_ID=SEQF7411.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=-;E-value=2.7000000000000002e-58;Score=194.7;Coverage_Seq=0.3997797356828194;Coverage_Hmm=0.9065155807365439
SEQF7411.1|JACHMA010000001.1	CCTyper	CDS	1307567	1308304	246	+	.	ID=SEQF7411.1|JACHMA010000001.1_1157_cas;Genome_ID=SEQF7411.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_CAS-I-E;coding_strand=+;E-value=4.1e-33;Score=111.7;Coverage_Seq=0.6951219512195121;Coverage_Hmm=0.9010989010989011
SEQF7411.1|JACHMA010000001.1	CCTyper	CDS	1303457	1304125	223	-	.	ID=SEQF7411.1|JACHMA010000001.1_1153_cas;Genome_ID=SEQF7411.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_1_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.800000000000001e-28;Score=95.1;Coverage_Seq=0.8878923766816144;Coverage_Hmm=0.9198113207547169
SEQF7411.1|JACHMA010000001.1	CCTyper	CDS	1306512	1307570	353	+	.	ID=SEQF7411.1|JACHMA010000001.1_1156_cas;Genome_ID=SEQF7411.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=+;E-value=3.1000000000000003e-73;Score=244.2;Coverage_Seq=0.8838526912181303;Coverage_Hmm=0.9164345403899722
SEQF7411.1|JACHMA010000001.1	CCTyper	CDS	1304323	1305906	528	+	.	ID=SEQF7411.1|JACHMA010000001.1_1154_cas;Genome_ID=SEQF7411.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_3_CAS-I-E;coding_strand=+;E-value=8e-64;Score=213.1;Coverage_Seq=0.759469696969697;Coverage_Hmm=0.7876447876447876
SEQF7411.1|JACHMA010000001.1	CCTyper	CDS	1305907	1306512	202	+	.	ID=SEQF7411.1|JACHMA010000001.1_1155_cas;Genome_ID=SEQF7411.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_3_CAS-I-E;coding_strand=+;E-value=1.8e-67;Score=223.9;Coverage_Seq=0.9603960396039604;Coverage_Hmm=0.9609756097560975