SEQF7436.1|LS483521.1	CCTyper	repeat_region	781856	782220	365	+	.	ID=SEQF7436.1|LS483521.1_1;Genome_ID=SEQF7436.1;Note=Predictor:CCtyper;Start:781856;End:782220;Consensus_Repeat:GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Number_of_Repeats:6;Repeat_Length:36;Average_Spacer_Length:29.8;Repeat_Identity:94.9;Spacer_Identity:38.8;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.998;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	direct_repeat	781856	781891	36	+	.	ID=SEQF7436.1|LS483521.1_1_REPEAT1;Parent=SEQF7436.1|LS483521.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	binding_site	781892	781920	29	+	.	ID=SEQF7436.1|LS483521.1_1_SPACER1;Parent=SEQF7436.1|LS483521.1_1;Note=TTCTTGTATCGTTTTTATGCCACTTTCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	direct_repeat	781921	781956	36	+	.	ID=SEQF7436.1|LS483521.1_1_REPEAT2;Parent=SEQF7436.1|LS483521.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	binding_site	781957	781986	30	+	.	ID=SEQF7436.1|LS483521.1_1_SPACER2;Parent=SEQF7436.1|LS483521.1_1;Note=TGATTTAGCAGGTAAAGCGTCGTGGGCATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	direct_repeat	781987	782022	36	+	.	ID=SEQF7436.1|LS483521.1_1_REPEAT3;Parent=SEQF7436.1|LS483521.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	binding_site	782023	782052	30	+	.	ID=SEQF7436.1|LS483521.1_1_SPACER3;Parent=SEQF7436.1|LS483521.1_1;Note=GAAATTCCTTAAAACCTCCTTTATGCTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	direct_repeat	782053	782088	36	+	.	ID=SEQF7436.1|LS483521.1_1_REPEAT4;Parent=SEQF7436.1|LS483521.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	binding_site	782089	782118	30	+	.	ID=SEQF7436.1|LS483521.1_1_SPACER4;Parent=SEQF7436.1|LS483521.1_1;Note=CTGATTTTGTTGCGATCCATAAAAGCACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	direct_repeat	782119	782154	36	+	.	ID=SEQF7436.1|LS483521.1_1_REPEAT5;Parent=SEQF7436.1|LS483521.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	binding_site	782155	782184	30	+	.	ID=SEQF7436.1|LS483521.1_1_SPACER5;Parent=SEQF7436.1|LS483521.1_1;Note=AACAAAAAGACGTCCATGTGAACGCCTCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	direct_repeat	782185	782220	36	+	.	ID=SEQF7436.1|LS483521.1_1_REPEAT6;Parent=SEQF7436.1|LS483521.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCTCCATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	repeat_region	1222799	1223032	234	+	.	ID=SEQF7436.1|LS483521.1_2;Genome_ID=SEQF7436.1;Note=Predictor:CCtyper;Start:1222799;End:1223032;Consensus_Repeat:TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Number_of_Repeats:4;Repeat_Length:33;Average_Spacer_Length:34.0;Repeat_Identity:94.2;Spacer_Identity:41.8;Spacer_Length_Sem:0.6;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.977;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	direct_repeat	1222799	1222831	33	+	.	ID=SEQF7436.1|LS483521.1_2_REPEAT1;Parent=SEQF7436.1|LS483521.1_2;Note=TCTTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	binding_site	1222832	1222864	33	+	.	ID=SEQF7436.1|LS483521.1_2_SPACER1;Parent=SEQF7436.1|LS483521.1_2;Note=TGTACGCGAGTATGTGACTAAATACGCCGTAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	direct_repeat	1222865	1222897	33	+	.	ID=SEQF7436.1|LS483521.1_2_REPEAT2;Parent=SEQF7436.1|LS483521.1_2;Note=AATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	binding_site	1222898	1222931	34	+	.	ID=SEQF7436.1|LS483521.1_2_SPACER2;Parent=SEQF7436.1|LS483521.1_2;Note=AGAAATGCTTAGTACGTTTCAAACCAGTCTTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	direct_repeat	1222932	1222964	33	+	.	ID=SEQF7436.1|LS483521.1_2_REPEAT3;Parent=SEQF7436.1|LS483521.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	binding_site	1222965	1222999	35	+	.	ID=SEQF7436.1|LS483521.1_2_SPACER3;Parent=SEQF7436.1|LS483521.1_2;Note=GGTTATCTCGTAGAAAATATGGGGTTAAAATCGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	direct_repeat	1223000	1223032	33	+	.	ID=SEQF7436.1|LS483521.1_2_REPEAT4;Parent=SEQF7436.1|LS483521.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7436.1|LS483521.1	CCTyper	OPERON	1223181	1231201	8021	-	.	ID=SEQF7436.1|LS483521.1@27;Genome_ID=SEQF7436.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas2_4_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas1_0_IC,Cas4_0_I-II,Cas7_2_CAS-I-C,Cas8c_0_IC,Cas5_0_IC,Cas3_1_CAS-I;Positions=1152,1153,1154,1156,1157,1158,1159,1160;E-values=3.20e-33,3.50e-80,1.40e-55,1.20e-19,2.90e-147,4.30e-177,2.00e-101,5.80e-151;CoverageSeq=0.939,0.982,0.982,0.907,0.993,0.987,0.831,0.934;CoverageHMM=0.989,0.471,0.485,0.633,0.989,0.995,1.0,0.995;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7436.1|LS483521.1	CCTyper	OPERON	775791	781753	5963	+	.	ID=SEQF7436.1|LS483521.1@18;Genome_ID=SEQF7436.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=717,718,719,720;E-values=0.00e+00,1.30e-103,3.10e-50,1.40e-108;CoverageSeq=0.996,0.928,0.99,0.982;CoverageHMM=1.0,0.996,0.905,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF7436.1|LS483521.1	CCTyper	CDS	1223485	1223973	163	-	.	ID=SEQF7436.1|LS483521.1_1153_cas;Genome_ID=SEQF7436.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=3.5e-80;Score=266.2;Coverage_Seq=0.9815950920245399;Coverage_Hmm=0.47058823529411764
SEQF7436.1|LS483521.1	CCTyper	CDS	1224010	1224510	167	-	.	ID=SEQF7436.1|LS483521.1_1154_cas;Genome_ID=SEQF7436.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=1.4e-55;Score=185.3;Coverage_Seq=0.9820359281437125;Coverage_Hmm=0.4852941176470588
SEQF7436.1|LS483521.1	CCTyper	CDS	779894	780763	290	+	.	ID=SEQF7436.1|LS483521.1_718_cas;Genome_ID=SEQF7436.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.3e-103;Score=342.5;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF7436.1|LS483521.1	CCTyper	CDS	1223181	1223474	98	-	.	ID=SEQF7436.1|LS483521.1_1152_cas;Genome_ID=SEQF7436.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.2000000000000005e-33;Score=110.6;Coverage_Seq=0.9387755102040817;Coverage_Hmm=0.9887640449438202
SEQF7436.1|LS483521.1	CCTyper	CDS	780790	781101	104	+	.	ID=SEQF7436.1|LS483521.1_719_cas;Genome_ID=SEQF7436.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.1e-50;Score=165.9;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF7436.1|LS483521.1	CCTyper	CDS	1228793	1231201	803	-	.	ID=SEQF7436.1|LS483521.1_1160_cas;Genome_ID=SEQF7436.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=5.7999999999999996e-151;Score=500.9;Coverage_Seq=0.933997509339975;Coverage_Hmm=0.9946308724832215
SEQF7436.1|LS483521.1	CCTyper	CDS	1224762	1225181	140	-	.	ID=SEQF7436.1|LS483521.1_1156_cas;Genome_ID=SEQF7436.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=-;E-value=1.2e-19;Score=67.4;Coverage_Seq=0.9071428571428571;Coverage_Hmm=0.6333333333333333
SEQF7436.1|LS483521.1	CCTyper	CDS	1227932	1228660	243	-	.	ID=SEQF7436.1|LS483521.1_1159_cas;Genome_ID=SEQF7436.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=-;E-value=2e-101;Score=334.8;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF7436.1|LS483521.1	CCTyper	CDS	1225183	1226031	283	-	.	ID=SEQF7436.1|LS483521.1_1157_cas;Genome_ID=SEQF7436.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=-;E-value=2.9e-147;Score=486.0;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF7436.1|LS483521.1	CCTyper	CDS	1226036	1227910	625	-	.	ID=SEQF7436.1|LS483521.1_1158_cas;Genome_ID=SEQF7436.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=-;E-value=4.3e-177;Score=586.7;Coverage_Seq=0.9872;Coverage_Hmm=0.9948979591836735
SEQF7436.1|LS483521.1	CCTyper	CDS	775791	779894	1368	+	.	ID=SEQF7436.1|LS483521.1_717_cas;Genome_ID=SEQF7436.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1657.2;Coverage_Seq=0.9963450292397661;Coverage_Hmm=1.0
SEQF7436.1|LS483521.1	CCTyper	CDS	781091	781753	221	+	.	ID=SEQF7436.1|LS483521.1_720_cas;Genome_ID=SEQF7436.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=1.4e-108;Score=358.1;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973