SEQF7437.1|CP060638.1	CCTyper	repeat_region	792981	793346	366	+	.	ID=SEQF7437.1|CP060638.1_1;Genome_ID=SEQF7437.1;Note=Predictor:CCtyper;Start:792981;End:793346;Consensus_Repeat:GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Number_of_Repeats:6;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:93.3;Spacer_Identity:50.3;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.998;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	direct_repeat	792981	793016	36	+	.	ID=SEQF7437.1|CP060638.1_1_REPEAT1;Parent=SEQF7437.1|CP060638.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	binding_site	793017	793046	30	+	.	ID=SEQF7437.1|CP060638.1_1_SPACER1;Parent=SEQF7437.1|CP060638.1_1;Note=TATACTAAAAGCTCTTAGAAGCGAAATGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	direct_repeat	793047	793082	36	+	.	ID=SEQF7437.1|CP060638.1_1_REPEAT2;Parent=SEQF7437.1|CP060638.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	binding_site	793083	793112	30	+	.	ID=SEQF7437.1|CP060638.1_1_SPACER2;Parent=SEQF7437.1|CP060638.1_1;Note=TTCCTCGATGACAGCAACAGATGGATCTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	direct_repeat	793113	793148	36	+	.	ID=SEQF7437.1|CP060638.1_1_REPEAT3;Parent=SEQF7437.1|CP060638.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	binding_site	793149	793178	30	+	.	ID=SEQF7437.1|CP060638.1_1_SPACER3;Parent=SEQF7437.1|CP060638.1_1;Note=TCGCATTGCTAAAGTGAACAAAGGCAGTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	direct_repeat	793179	793214	36	+	.	ID=SEQF7437.1|CP060638.1_1_REPEAT4;Parent=SEQF7437.1|CP060638.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	binding_site	793215	793244	30	+	.	ID=SEQF7437.1|CP060638.1_1_SPACER4;Parent=SEQF7437.1|CP060638.1_1;Note=ACTACTTTTGCGAGTAGCTTAGCACGTCCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	direct_repeat	793245	793280	36	+	.	ID=SEQF7437.1|CP060638.1_1_REPEAT5;Parent=SEQF7437.1|CP060638.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	binding_site	793281	793310	30	+	.	ID=SEQF7437.1|CP060638.1_1_SPACER5;Parent=SEQF7437.1|CP060638.1_1;Note=ACTACTTTTGCGAGTAGCTTAGCACGTCCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	direct_repeat	793311	793346	36	+	.	ID=SEQF7437.1|CP060638.1_1_REPEAT6;Parent=SEQF7437.1|CP060638.1_1;Note=GTTTTAGAGCTATGCTGTCTTGAATGGTCTCCATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	repeat_region	1319171	1319603	433	+	.	ID=SEQF7437.1|CP060638.1_2;Genome_ID=SEQF7437.1;Note=Predictor:CCtyper;Start:1319171;End:1319603;Consensus_Repeat:TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Number_of_Repeats:7;Repeat_Length:33;Average_Spacer_Length:33.7;Repeat_Identity:95.0;Spacer_Identity:41.4;Spacer_Length_Sem:0.8;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.977;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	direct_repeat	1319171	1319203	33	+	.	ID=SEQF7437.1|CP060638.1_2_REPEAT1;Parent=SEQF7437.1|CP060638.1_2;Note=TCTTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	binding_site	1319204	1319237	34	+	.	ID=SEQF7437.1|CP060638.1_2_SPACER1;Parent=SEQF7437.1|CP060638.1_2;Note=TTGAAAAAGCATTGGGAACGCTCAAAATCACACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	direct_repeat	1319238	1319270	33	+	.	ID=SEQF7437.1|CP060638.1_2_REPEAT2;Parent=SEQF7437.1|CP060638.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGCGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	binding_site	1319271	1319302	32	+	.	ID=SEQF7437.1|CP060638.1_2_SPACER2;Parent=SEQF7437.1|CP060638.1_2;Note=CCGCATAGTTTTTAGGTGTCGCATTACCAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	direct_repeat	1319303	1319335	33	+	.	ID=SEQF7437.1|CP060638.1_2_REPEAT3;Parent=SEQF7437.1|CP060638.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	binding_site	1319336	1319367	32	+	.	ID=SEQF7437.1|CP060638.1_2_SPACER3;Parent=SEQF7437.1|CP060638.1_2;Note=GAATATAATCATCAAGGTTATCCTCGACAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	direct_repeat	1319368	1319400	33	+	.	ID=SEQF7437.1|CP060638.1_2_REPEAT4;Parent=SEQF7437.1|CP060638.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	binding_site	1319401	1319437	37	+	.	ID=SEQF7437.1|CP060638.1_2_SPACER4;Parent=SEQF7437.1|CP060638.1_2;Note=TGTACTATCAATTTCGTATTTTAGTAAAGTTTGTTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	direct_repeat	1319438	1319470	33	+	.	ID=SEQF7437.1|CP060638.1_2_REPEAT5;Parent=SEQF7437.1|CP060638.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	binding_site	1319471	1319505	35	+	.	ID=SEQF7437.1|CP060638.1_2_SPACER5;Parent=SEQF7437.1|CP060638.1_2;Note=AAGCTCATTAACGGCCCATCGCTGATATCATTGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	direct_repeat	1319506	1319538	33	+	.	ID=SEQF7437.1|CP060638.1_2_REPEAT6;Parent=SEQF7437.1|CP060638.1_2;Note=AATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	binding_site	1319539	1319570	32	+	.	ID=SEQF7437.1|CP060638.1_2_SPACER6;Parent=SEQF7437.1|CP060638.1_2;Note=ACACCTTCAACTGCTTTAATTCGTTTCACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	direct_repeat	1319571	1319603	33	+	.	ID=SEQF7437.1|CP060638.1_2_REPEAT7;Parent=SEQF7437.1|CP060638.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7437.1|CP060638.1	CCTyper	OPERON	786913	792878	5966	+	.	ID=SEQF7437.1|CP060638.1@17;Genome_ID=SEQF7437.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=732,733,734,735;E-values=0.00e+00,6.50e-104,1.50e-50,1.00e-108;CoverageSeq=0.996,0.928,0.99,0.982;CoverageHMM=1.0,0.996,0.905,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF7437.1|CP060638.1	CCTyper	OPERON	1319752	1327772	8021	-	.	ID=SEQF7437.1|CP060638.1@28;Genome_ID=SEQF7437.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=22.0;Genes=Cas2_4_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas4_3_CAS-I-II-III-IV-V-VI,Cas4_5_CAS-I-II-III-IV-V-VI,Cas7_2_CAS-I-C,Cas8c_0_IC,Cas5_0_IC,Cas3_1_CAS-I;Positions=1286,1287,1288,1289,1290,1291,1292,1293;E-values=3.50e-33,2.20e-148,7.20e-20,8.50e-14,4.40e-148,9.40e-176,9.80e-101,3.00e-150;CoverageSeq=0.939,0.991,0.755,0.77,0.993,0.979,0.831,0.934;CoverageHMM=0.989,1.0,0.376,0.497,0.989,0.998,1.0,0.995;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7437.1|CP060638.1	CCTyper	CDS	1320056	1321081	342	-	.	ID=SEQF7437.1|CP060638.1_1287_cas;Genome_ID=SEQF7437.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=2.1999999999999998e-148;Score=490.6;Coverage_Seq=0.9912280701754386;Coverage_Hmm=1.0
SEQF7437.1|CP060638.1	CCTyper	CDS	791019	791888	290	+	.	ID=SEQF7437.1|CP060638.1_733_cas;Genome_ID=SEQF7437.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.5e-104;Score=343.6;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF7437.1|CP060638.1	CCTyper	CDS	1319752	1320045	98	-	.	ID=SEQF7437.1|CP060638.1_1286_cas;Genome_ID=SEQF7437.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.5e-33;Score=110.6;Coverage_Seq=0.9387755102040817;Coverage_Hmm=0.9887640449438202
SEQF7437.1|CP060638.1	CCTyper	CDS	791915	792226	104	+	.	ID=SEQF7437.1|CP060638.1_734_cas;Genome_ID=SEQF7437.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.5e-50;Score=167.0;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF7437.1|CP060638.1	CCTyper	CDS	1325364	1327772	803	-	.	ID=SEQF7437.1|CP060638.1_1293_cas;Genome_ID=SEQF7437.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=3e-150;Score=498.6;Coverage_Seq=0.933997509339975;Coverage_Hmm=0.9946308724832215
SEQF7437.1|CP060638.1	CCTyper	CDS	1321078	1321371	98	-	.	ID=SEQF7437.1|CP060638.1_1288_cas;Genome_ID=SEQF7437.1;Feature_type=CDS;Product=Cas Prediction : Cas4_3_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=7.2e-20;Score=68.6;Coverage_Seq=0.7551020408163265;Coverage_Hmm=0.3756345177664975
SEQF7437.1|CP060638.1	CCTyper	CDS	1321337	1321753	139	-	.	ID=SEQF7437.1|CP060638.1_1289_cas;Genome_ID=SEQF7437.1;Feature_type=CDS;Product=Cas Prediction : Cas4_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.5e-14;Score=48.7;Coverage_Seq=0.7697841726618705;Coverage_Hmm=0.4968944099378882
SEQF7437.1|CP060638.1	CCTyper	CDS	1324503	1325231	243	-	.	ID=SEQF7437.1|CP060638.1_1292_cas;Genome_ID=SEQF7437.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=-;E-value=9.8e-101;Score=332.7;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF7437.1|CP060638.1	CCTyper	CDS	1321755	1322603	283	-	.	ID=SEQF7437.1|CP060638.1_1290_cas;Genome_ID=SEQF7437.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=-;E-value=4.3999999999999996e-148;Score=488.8;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF7437.1|CP060638.1	CCTyper	CDS	1322608	1324503	632	-	.	ID=SEQF7437.1|CP060638.1_1291_cas;Genome_ID=SEQF7437.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=-;E-value=9.4e-176;Score=582.4;Coverage_Seq=0.9794303797468354;Coverage_Hmm=0.9982993197278912
SEQF7437.1|CP060638.1	CCTyper	CDS	786913	791019	1369	+	.	ID=SEQF7437.1|CP060638.1_732_cas;Genome_ID=SEQF7437.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1669.2;Coverage_Seq=0.9963476990504018;Coverage_Hmm=1.0
SEQF7437.1|CP060638.1	CCTyper	CDS	792216	792878	221	+	.	ID=SEQF7437.1|CP060638.1_735_cas;Genome_ID=SEQF7437.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=1e-108;Score=358.7;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973