SEQF7438.1|LR130238.1	CCTyper	repeat_region	802561	802794	234	+	.	ID=SEQF7438.1|LR130238.1_1;Genome_ID=SEQF7438.1;Note=Predictor:CCtyper;Start:802561;End:802794;Consensus_Repeat:GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Number_of_Repeats:4;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:92.3;Spacer_Identity:37.4;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.998;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	direct_repeat	802561	802596	36	+	.	ID=SEQF7438.1|LR130238.1_1_REPEAT1;Parent=SEQF7438.1|LR130238.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	binding_site	802597	802626	30	+	.	ID=SEQF7438.1|LR130238.1_1_SPACER1;Parent=SEQF7438.1|LR130238.1_1;Note=GGGTGGTTGGCTGACGCATCGCAATATTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	direct_repeat	802627	802662	36	+	.	ID=SEQF7438.1|LR130238.1_1_REPEAT2;Parent=SEQF7438.1|LR130238.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	binding_site	802663	802692	30	+	.	ID=SEQF7438.1|LR130238.1_1_SPACER2;Parent=SEQF7438.1|LR130238.1_1;Note=AGGAATATCCGCAATAATTAATTGCGCTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	direct_repeat	802693	802728	36	+	.	ID=SEQF7438.1|LR130238.1_1_REPEAT3;Parent=SEQF7438.1|LR130238.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	binding_site	802729	802758	30	+	.	ID=SEQF7438.1|LR130238.1_1_SPACER3;Parent=SEQF7438.1|LR130238.1_1;Note=TAAATTTGTTTAGCAGGTAAACCGTGCTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	direct_repeat	802759	802794	36	+	.	ID=SEQF7438.1|LR130238.1_1_REPEAT4;Parent=SEQF7438.1|LR130238.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCTCCATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	repeat_region	1323885	1324179	295	+	.	ID=SEQF7438.1|LR130238.1_2;Genome_ID=SEQF7438.1;Note=Predictor:CCtyper;Start:1323885;End:1324179;Consensus_Repeat:ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Number_of_Repeats:5;Repeat_Length:32;Average_Spacer_Length:33.8;Repeat_Identity:95.2;Spacer_Identity:39.2;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.995;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	direct_repeat	1323885	1323916	32	+	.	ID=SEQF7438.1|LR130238.1_2_REPEAT1;Parent=SEQF7438.1|LR130238.1_2;Note=CTTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	binding_site	1323917	1323949	33	+	.	ID=SEQF7438.1|LR130238.1_2_SPACER1;Parent=SEQF7438.1|LR130238.1_2;Note=GAGTTTACTCGCTCAAATCAAGGTATGCGGACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	direct_repeat	1323950	1323981	32	+	.	ID=SEQF7438.1|LR130238.1_2_REPEAT2;Parent=SEQF7438.1|LR130238.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	binding_site	1323982	1324015	34	+	.	ID=SEQF7438.1|LR130238.1_2_SPACER2;Parent=SEQF7438.1|LR130238.1_2;Note=GCTGTGACATTGCGGGATGTAATCAAAGTAAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	direct_repeat	1324016	1324047	32	+	.	ID=SEQF7438.1|LR130238.1_2_REPEAT3;Parent=SEQF7438.1|LR130238.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	binding_site	1324048	1324080	33	+	.	ID=SEQF7438.1|LR130238.1_2_SPACER3;Parent=SEQF7438.1|LR130238.1_2;Note=TAAAGCAAACCTAGCAGAAGCAGAAAATGACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	direct_repeat	1324081	1324112	32	+	.	ID=SEQF7438.1|LR130238.1_2_REPEAT4;Parent=SEQF7438.1|LR130238.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	binding_site	1324113	1324147	35	+	.	ID=SEQF7438.1|LR130238.1_2_SPACER4;Parent=SEQF7438.1|LR130238.1_2;Note=CTGATGTAATTGGTGATTTTCGTGATATGCTTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	direct_repeat	1324148	1324179	32	+	.	ID=SEQF7438.1|LR130238.1_2_REPEAT5;Parent=SEQF7438.1|LR130238.1_2;Note=ATTTCGATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7438.1|LR130238.1	CCTyper	OPERON	796493	802458	5966	+	.	ID=SEQF7438.1|LR130238.1@19;Genome_ID=SEQF7438.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=741,742,743,744;E-values=0.00e+00,6.90e-104,1.60e-50,2.10e-108;CoverageSeq=0.996,0.928,0.99,0.982;CoverageHMM=1.0,0.996,0.905,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF7438.1|LR130238.1	CCTyper	OPERON	1324328	1332340	8013	-	.	ID=SEQF7438.1|LR130238.1@29;Genome_ID=SEQF7438.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=23.0;Genes=Cas2_4_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas4_0_I-II,Cas7_2_CAS-I-C,Cas8c_0_IC,Cas5_0_IC,Cas3_1_CAS-I,Cas3HD_0_CAS-I;Positions=1291,1292,1293,1294,1295,1296,1297,1298;E-values=3.70e-33,5.70e-148,5.70e-36,2.20e-148,4.10e-179,2.30e-101,7.50e-130,1.00e-25;CoverageSeq=0.939,0.991,0.84,0.993,0.979,0.831,0.995,0.82;CoverageHMM=0.989,1.0,0.983,0.989,0.998,1.0,0.828,0.695;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7438.1|LR130238.1	CCTyper	CDS	1324632	1325657	342	-	.	ID=SEQF7438.1|LR130238.1_1292_cas;Genome_ID=SEQF7438.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=5.7e-148;Score=489.3;Coverage_Seq=0.9912280701754386;Coverage_Hmm=1.0
SEQF7438.1|LR130238.1	CCTyper	CDS	800599	801468	290	+	.	ID=SEQF7438.1|LR130238.1_742_cas;Genome_ID=SEQF7438.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.9e-104;Score=343.6;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF7438.1|LR130238.1	CCTyper	CDS	1324328	1324621	98	-	.	ID=SEQF7438.1|LR130238.1_1291_cas;Genome_ID=SEQF7438.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.7e-33;Score=110.6;Coverage_Seq=0.9387755102040817;Coverage_Hmm=0.9887640449438202
SEQF7438.1|LR130238.1	CCTyper	CDS	801495	801806	104	+	.	ID=SEQF7438.1|LR130238.1_743_cas;Genome_ID=SEQF7438.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.6e-50;Score=167.0;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF7438.1|LR130238.1	CCTyper	CDS	1331840	1332340	167	-	.	ID=SEQF7438.1|LR130238.1_1298_cas;Genome_ID=SEQF7438.1;Feature_type=CDS;Product=Cas Prediction : Cas3HD_0_CAS-I;coding_strand=-;E-value=9.999999999999999e-26;Score=87.5;Coverage_Seq=0.8203592814371258;Coverage_Hmm=0.6945812807881774
SEQF7438.1|LR130238.1	CCTyper	CDS	1329939	1331798	620	-	.	ID=SEQF7438.1|LR130238.1_1297_cas;Genome_ID=SEQF7438.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=7.500000000000001e-130;Score=431.2;Coverage_Seq=0.9951612903225806;Coverage_Hmm=0.8281879194630872
SEQF7438.1|LR130238.1	CCTyper	CDS	1325654	1326328	225	-	.	ID=SEQF7438.1|LR130238.1_1293_cas;Genome_ID=SEQF7438.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=-;E-value=5.7000000000000006e-36;Score=120.8;Coverage_Seq=0.84;Coverage_Hmm=0.9833333333333333
SEQF7438.1|LR130238.1	CCTyper	CDS	1329078	1329806	243	-	.	ID=SEQF7438.1|LR130238.1_1296_cas;Genome_ID=SEQF7438.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=-;E-value=2.3e-101;Score=334.8;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF7438.1|LR130238.1	CCTyper	CDS	1326330	1327178	283	-	.	ID=SEQF7438.1|LR130238.1_1294_cas;Genome_ID=SEQF7438.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=-;E-value=2.1999999999999998e-148;Score=489.9;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF7438.1|LR130238.1	CCTyper	CDS	1327183	1329078	632	-	.	ID=SEQF7438.1|LR130238.1_1295_cas;Genome_ID=SEQF7438.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=-;E-value=4.1e-179;Score=593.6;Coverage_Seq=0.9794303797468354;Coverage_Hmm=0.9982993197278912
SEQF7438.1|LR130238.1	CCTyper	CDS	796493	800599	1369	+	.	ID=SEQF7438.1|LR130238.1_741_cas;Genome_ID=SEQF7438.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1680.0;Coverage_Seq=0.9963476990504018;Coverage_Hmm=1.0
SEQF7438.1|LR130238.1	CCTyper	CDS	801796	802458	221	+	.	ID=SEQF7438.1|LR130238.1_744_cas;Genome_ID=SEQF7438.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=2.1e-108;Score=357.8;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973