SEQF7444.1|LS483322.1	CCTyper	repeat_region	959228	959529	302	+	.	ID=SEQF7444.1|LS483322.1-12_1;Genome_ID=SEQF7444.1;Note=Predictor:CCtyper;Start:959228;End:959529;Consensus_Repeat:GTTTTGGGACCACTCAAAACAGCATAGCTCTAAAACC;Number_of_Repeats:5;Repeat_Length:37.6;Average_Spacer_Length:28.5;Repeat_Identity:84.4;Spacer_Identity:54.4;Spacer_Length_Sem:0.6;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.964;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7444.1|LS483322.1	CCTyper	direct_repeat	959228	959266	39	+	.	ID=SEQF7444.1|LS483322.1-12_1_REPEAT1;Parent=SEQF7444.1|LS483322.1-12_1;Note=GAATGGAGACCATTCAAGACAGCATAGCTCTAAAACCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7444.1|LS483322.1	CCTyper	binding_site	959267	959293	27	+	.	ID=SEQF7444.1|LS483322.1-12_1_SPACER1;Parent=SEQF7444.1|LS483322.1-12_1;Note=GAGATGGCAAAGATTCGGTTTACTCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7444.1|LS483322.1	CCTyper	direct_repeat	959294	959330	37	+	.	ID=SEQF7444.1|LS483322.1-12_1_REPEAT2;Parent=SEQF7444.1|LS483322.1-12_1;Note=GTTTTGGGACCACTCAAAACAGCATAGCTCTAAAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7444.1|LS483322.1	CCTyper	binding_site	959331	959358	28	+	.	ID=SEQF7444.1|LS483322.1-12_1_SPACER2;Parent=SEQF7444.1|LS483322.1-12_1;Note=CATCTAAAATTATTTGTGGGCAGTCTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7444.1|LS483322.1	CCTyper	direct_repeat	959359	959395	37	+	.	ID=SEQF7444.1|LS483322.1-12_1_REPEAT3;Parent=SEQF7444.1|LS483322.1-12_1;Note=CGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7444.1|LS483322.1	CCTyper	binding_site	959396	959424	29	+	.	ID=SEQF7444.1|LS483322.1-12_1_SPACER3;Parent=SEQF7444.1|LS483322.1-12_1;Note=ATAACCTAAGCGTTGGATGTTGTGATCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7444.1|LS483322.1	CCTyper	direct_repeat	959425	959461	37	+	.	ID=SEQF7444.1|LS483322.1-12_1_REPEAT4;Parent=SEQF7444.1|LS483322.1-12_1;Note=TGTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7444.1|LS483322.1	CCTyper	binding_site	959462	959491	30	+	.	ID=SEQF7444.1|LS483322.1-12_1_SPACER4;Parent=SEQF7444.1|LS483322.1-12_1;Note=ATAACCTAAGCGTTGGATGTTGTGATCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7444.1|LS483322.1	CCTyper	direct_repeat	959492	959529	38	+	.	ID=SEQF7444.1|LS483322.1-12_1_REPEAT5;Parent=SEQF7444.1|LS483322.1-12_1;Note=GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7444.1|LS483322.1	CCTyper	OPERON	959630	965595	5966	-	.	ID=SEQF7444.1|LS483322.1@18;Genome_ID=SEQF7444.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=905,906,907,908;E-values=3.20e-109,3.10e-50,6.00e-104,0.00e+00;CoverageSeq=0.982,0.99,0.928,0.996;CoverageHMM=0.995,0.905,0.996,1.0;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7444.1|LS483322.1	CCTyper	CDS	960620	961489	290	-	.	ID=SEQF7444.1|LS483322.1_907_cas;Genome_ID=SEQF7444.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6e-104;Score=343.6;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF7444.1|LS483322.1	CCTyper	CDS	960282	960593	104	-	.	ID=SEQF7444.1|LS483322.1_906_cas;Genome_ID=SEQF7444.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.1e-50;Score=165.9;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF7444.1|LS483322.1	CCTyper	CDS	961489	965595	1369	-	.	ID=SEQF7444.1|LS483322.1_908_cas;Genome_ID=SEQF7444.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1668.4;Coverage_Seq=0.9963476990504018;Coverage_Hmm=1.0
SEQF7444.1|LS483322.1	CCTyper	CDS	959630	960292	221	-	.	ID=SEQF7444.1|LS483322.1_905_cas;Genome_ID=SEQF7444.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=3.1999999999999997e-109;Score=360.3;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973