SEQF7446.1|CP031635.1	CCTyper	repeat_region	606230	606391	162	+	.	ID=SEQF7446.1|CP031635.1_1;Genome_ID=SEQF7446.1;Note=Predictor:CCtyper;Start:606230;End:606391;Consensus_Repeat:GTCTCACCCTTCATGGGTGAGTGGATTGAAA;Number_of_Repeats:3;Repeat_Length:31;Average_Spacer_Length:34.5;Repeat_Identity:100.0;Spacer_Identity:40.8;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.989;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7446.1|CP031635.1	CCTyper	direct_repeat	606230	606260	31	+	.	ID=SEQF7446.1|CP031635.1_1_REPEAT1;Parent=SEQF7446.1|CP031635.1_1;Note=GTCTCACCCTTCATGGGTGAGTGGATTGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7446.1|CP031635.1	CCTyper	binding_site	606261	606295	35	+	.	ID=SEQF7446.1|CP031635.1_1_SPACER1;Parent=SEQF7446.1|CP031635.1_1;Note=TAAATAATTACATGACTAGCCAATACACCCACATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7446.1|CP031635.1	CCTyper	direct_repeat	606296	606326	31	+	.	ID=SEQF7446.1|CP031635.1_1_REPEAT2;Parent=SEQF7446.1|CP031635.1_1;Note=GTCTCACCCTTCATGGGTGAGTGGATTGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7446.1|CP031635.1	CCTyper	binding_site	606327	606360	34	+	.	ID=SEQF7446.1|CP031635.1_1_SPACER2;Parent=SEQF7446.1|CP031635.1_1;Note=TTTCATGAGCTTCTTTACTCTCAAAGTAAGAGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7446.1|CP031635.1	CCTyper	direct_repeat	606361	606391	31	+	.	ID=SEQF7446.1|CP031635.1_1_REPEAT3;Parent=SEQF7446.1|CP031635.1_1;Note=GTCTCACCCTTCATGGGTGAGTGGATTGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7446.1|CP031635.1	CCTyper	repeat_region	1112465	1112764	300	+	.	ID=SEQF7446.1|CP031635.1_2;Genome_ID=SEQF7446.1;Note=Predictor:CCtyper;Start:1112465;End:1112764;Consensus_Repeat:GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC;Number_of_Repeats:5;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:93.8;Spacer_Identity:41.9;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.998;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7446.1|CP031635.1	CCTyper	direct_repeat	1112465	1112500	36	+	.	ID=SEQF7446.1|CP031635.1_2_REPEAT1;Parent=SEQF7446.1|CP031635.1_2;Note=GAATGGAGACCATTCAAAACAGCATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7446.1|CP031635.1	CCTyper	binding_site	1112501	1112530	30	+	.	ID=SEQF7446.1|CP031635.1_2_SPACER1;Parent=SEQF7446.1|CP031635.1_2;Note=GGAAAGCAGGAGAAAGGACGTTAATATGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7446.1|CP031635.1	CCTyper	direct_repeat	1112531	1112566	36	+	.	ID=SEQF7446.1|CP031635.1_2_REPEAT2;Parent=SEQF7446.1|CP031635.1_2;Note=GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7446.1|CP031635.1	CCTyper	binding_site	1112567	1112596	30	+	.	ID=SEQF7446.1|CP031635.1_2_SPACER2;Parent=SEQF7446.1|CP031635.1_2;Note=GTCAAACTCAATTTTTTGTCTAGCTCTATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7446.1|CP031635.1	CCTyper	direct_repeat	1112597	1112632	36	+	.	ID=SEQF7446.1|CP031635.1_2_REPEAT3;Parent=SEQF7446.1|CP031635.1_2;Note=GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7446.1|CP031635.1	CCTyper	binding_site	1112633	1112662	30	+	.	ID=SEQF7446.1|CP031635.1_2_SPACER3;Parent=SEQF7446.1|CP031635.1_2;Note=AGACAAAAGAAAAAGCATTGTCAATTTCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7446.1|CP031635.1	CCTyper	direct_repeat	1112663	1112698	36	+	.	ID=SEQF7446.1|CP031635.1_2_REPEAT4;Parent=SEQF7446.1|CP031635.1_2;Note=GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7446.1|CP031635.1	CCTyper	binding_site	1112699	1112728	30	+	.	ID=SEQF7446.1|CP031635.1_2_SPACER4;Parent=SEQF7446.1|CP031635.1_2;Note=AATAATCAGTTTAAAAATCCATCTGGAGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7446.1|CP031635.1	CCTyper	direct_repeat	1112729	1112764	36	+	.	ID=SEQF7446.1|CP031635.1_2_REPEAT5;Parent=SEQF7446.1|CP031635.1_2;Note=GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7446.1|CP031635.1	CCTyper	OPERON	1112867	1118832	5966	-	.	ID=SEQF7446.1|CP031635.1@25;Genome_ID=SEQF7446.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=1062,1063,1064,1065;E-values=2.40e-108,1.50e-50,6.60e-104,0.00e+00;CoverageSeq=0.982,0.99,0.928,0.996;CoverageHMM=0.995,0.905,0.996,1.0;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7446.1|CP031635.1	CCTyper	OPERON	598062	606081	8020	+	.	ID=SEQF7446.1|CP031635.1@13;Genome_ID=SEQF7446.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas3_1_CAS-I,Cas5_0_IC,Cas8c_0_IC,Cas7_2_CAS-I-C,Cas4_0_I-II,Cas1_0_IC,Cas2_4_CAS-I-II-III-IV-V-VI;Positions=540,541,542,543,544,545,546;E-values=3.90e-150,2.20e-101,3.60e-177,4.70e-148,6.30e-36,2.90e-147,3.50e-33;CoverageSeq=0.934,0.831,0.979,0.993,0.84,0.991,0.939;CoverageHMM=0.995,1.0,0.998,0.989,0.983,1.0,0.989;Strand_Interference=1;Strand_Adaptation=1
SEQF7446.1|CP031635.1	CCTyper	CDS	604752	605777	342	+	.	ID=SEQF7446.1|CP031635.1_545_cas;Genome_ID=SEQF7446.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=+;E-value=2.9e-147;Score=487.0;Coverage_Seq=0.9912280701754386;Coverage_Hmm=1.0
SEQF7446.1|CP031635.1	CCTyper	CDS	1113857	1114726	290	-	.	ID=SEQF7446.1|CP031635.1_1064_cas;Genome_ID=SEQF7446.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.6e-104;Score=343.6;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF7446.1|CP031635.1	CCTyper	CDS	605788	606081	98	+	.	ID=SEQF7446.1|CP031635.1_546_cas;Genome_ID=SEQF7446.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.5e-33;Score=110.6;Coverage_Seq=0.9387755102040817;Coverage_Hmm=0.9887640449438202
SEQF7446.1|CP031635.1	CCTyper	CDS	1113519	1113830	104	-	.	ID=SEQF7446.1|CP031635.1_1063_cas;Genome_ID=SEQF7446.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.5e-50;Score=167.0;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF7446.1|CP031635.1	CCTyper	CDS	598062	600470	803	+	.	ID=SEQF7446.1|CP031635.1_540_cas;Genome_ID=SEQF7446.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=+;E-value=3.9e-150;Score=498.2;Coverage_Seq=0.933997509339975;Coverage_Hmm=0.9946308724832215
SEQF7446.1|CP031635.1	CCTyper	CDS	604081	604755	225	+	.	ID=SEQF7446.1|CP031635.1_544_cas;Genome_ID=SEQF7446.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=+;E-value=6.300000000000001e-36;Score=120.6;Coverage_Seq=0.84;Coverage_Hmm=0.9833333333333333
SEQF7446.1|CP031635.1	CCTyper	CDS	600603	601331	243	+	.	ID=SEQF7446.1|CP031635.1_541_cas;Genome_ID=SEQF7446.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=+;E-value=2.2000000000000002e-101;Score=334.8;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF7446.1|CP031635.1	CCTyper	CDS	603231	604079	283	+	.	ID=SEQF7446.1|CP031635.1_543_cas;Genome_ID=SEQF7446.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=+;E-value=4.7e-148;Score=488.8;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF7446.1|CP031635.1	CCTyper	CDS	601331	603226	632	+	.	ID=SEQF7446.1|CP031635.1_542_cas;Genome_ID=SEQF7446.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=+;E-value=3.6e-177;Score=587.1;Coverage_Seq=0.9794303797468354;Coverage_Hmm=0.9982993197278912
SEQF7446.1|CP031635.1	CCTyper	CDS	1114726	1118832	1369	-	.	ID=SEQF7446.1|CP031635.1_1065_cas;Genome_ID=SEQF7446.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1678.3;Coverage_Seq=0.9963476990504018;Coverage_Hmm=1.0
SEQF7446.1|CP031635.1	CCTyper	CDS	1112867	1113529	221	-	.	ID=SEQF7446.1|CP031635.1_1062_cas;Genome_ID=SEQF7446.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=2.4e-108;Score=357.5;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973