SEQF7448.1|AP014585.1	CCTyper	repeat_region	772533	772766	234	+	.	ID=SEQF7448.1|AP014585.1_1;Genome_ID=SEQF7448.1;Note=Predictor:CCtyper;Start:772533;End:772766;Consensus_Repeat:GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Number_of_Repeats:4;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:92.3;Spacer_Identity:37.4;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.998;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	direct_repeat	772533	772568	36	+	.	ID=SEQF7448.1|AP014585.1_1_REPEAT1;Parent=SEQF7448.1|AP014585.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	binding_site	772569	772598	30	+	.	ID=SEQF7448.1|AP014585.1_1_SPACER1;Parent=SEQF7448.1|AP014585.1_1;Note=GGGTGGTTGGCTGACGCATCGCAATATTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	direct_repeat	772599	772634	36	+	.	ID=SEQF7448.1|AP014585.1_1_REPEAT2;Parent=SEQF7448.1|AP014585.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	binding_site	772635	772664	30	+	.	ID=SEQF7448.1|AP014585.1_1_SPACER2;Parent=SEQF7448.1|AP014585.1_1;Note=AGGAATATCCGCAATAATTAATTGCGCTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	direct_repeat	772665	772700	36	+	.	ID=SEQF7448.1|AP014585.1_1_REPEAT3;Parent=SEQF7448.1|AP014585.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	binding_site	772701	772730	30	+	.	ID=SEQF7448.1|AP014585.1_1_SPACER3;Parent=SEQF7448.1|AP014585.1_1;Note=TAAATTTGTTTAGCAGGTAAACCGTGCTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	direct_repeat	772731	772766	36	+	.	ID=SEQF7448.1|AP014585.1_1_REPEAT4;Parent=SEQF7448.1|AP014585.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCTCCATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	repeat_region	1193416	1193709	294	+	.	ID=SEQF7448.1|AP014585.1_2;Genome_ID=SEQF7448.1;Note=Predictor:CCtyper;Start:1193416;End:1193709;Consensus_Repeat:ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Number_of_Repeats:5;Repeat_Length:32;Average_Spacer_Length:33.5;Repeat_Identity:95.2;Spacer_Identity:39.2;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.995;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	direct_repeat	1193416	1193447	32	+	.	ID=SEQF7448.1|AP014585.1_2_REPEAT1;Parent=SEQF7448.1|AP014585.1_2;Note=CTTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	binding_site	1193448	1193480	33	+	.	ID=SEQF7448.1|AP014585.1_2_SPACER1;Parent=SEQF7448.1|AP014585.1_2;Note=GAGTTTACTCGCTCAAATCAAGGTATGCGGACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	direct_repeat	1193481	1193512	32	+	.	ID=SEQF7448.1|AP014585.1_2_REPEAT2;Parent=SEQF7448.1|AP014585.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	binding_site	1193513	1193545	33	+	.	ID=SEQF7448.1|AP014585.1_2_SPACER2;Parent=SEQF7448.1|AP014585.1_2;Note=GCTGTGACATTGCGGGATGTAATCAAAGTAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	direct_repeat	1193546	1193577	32	+	.	ID=SEQF7448.1|AP014585.1_2_REPEAT3;Parent=SEQF7448.1|AP014585.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	binding_site	1193578	1193610	33	+	.	ID=SEQF7448.1|AP014585.1_2_SPACER3;Parent=SEQF7448.1|AP014585.1_2;Note=TAAAGCAAACCTAGCAGAAGCAGAAAATGACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	direct_repeat	1193611	1193642	32	+	.	ID=SEQF7448.1|AP014585.1_2_REPEAT4;Parent=SEQF7448.1|AP014585.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	binding_site	1193643	1193677	35	+	.	ID=SEQF7448.1|AP014585.1_2_SPACER4;Parent=SEQF7448.1|AP014585.1_2;Note=CTGATGTAATTGGTGATTTTCGTGATATGCTTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	direct_repeat	1193678	1193709	32	+	.	ID=SEQF7448.1|AP014585.1_2_REPEAT5;Parent=SEQF7448.1|AP014585.1_2;Note=ATTTCGATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7448.1|AP014585.1	CCTyper	OPERON	1193858	1201871	8014	-	.	ID=SEQF7448.1|AP014585.1@27;Genome_ID=SEQF7448.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas2_4_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas4_0_I-II,Cas7_2_CAS-I-C,Cas8c_0_IC,Cas5_0_IC,Cas3_1_CAS-I;Positions=1167,1168,1169,1170,1171,1172,1173;E-values=3.30e-33,5.00e-148,5.00e-36,2.00e-148,3.60e-179,2.00e-101,1.20e-151;CoverageSeq=0.939,0.991,0.84,0.993,0.979,0.831,0.936;CoverageHMM=0.989,1.0,0.983,0.989,0.998,1.0,0.995;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7448.1|AP014585.1	CCTyper	OPERON	766465	772430	5966	+	.	ID=SEQF7448.1|AP014585.1@18;Genome_ID=SEQF7448.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=723,724,725,726;E-values=0.00e+00,6.10e-104,1.40e-50,6.30e-109;CoverageSeq=0.996,0.928,0.99,0.982;CoverageHMM=1.0,0.996,0.905,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF7448.1|AP014585.1	CCTyper	CDS	1194162	1195187	342	-	.	ID=SEQF7448.1|AP014585.1_1168_cas;Genome_ID=SEQF7448.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=5e-148;Score=489.3;Coverage_Seq=0.9912280701754386;Coverage_Hmm=1.0
SEQF7448.1|AP014585.1	CCTyper	CDS	770571	771440	290	+	.	ID=SEQF7448.1|AP014585.1_724_cas;Genome_ID=SEQF7448.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.100000000000001e-104;Score=343.6;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF7448.1|AP014585.1	CCTyper	CDS	1193858	1194151	98	-	.	ID=SEQF7448.1|AP014585.1_1167_cas;Genome_ID=SEQF7448.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.3e-33;Score=110.6;Coverage_Seq=0.9387755102040817;Coverage_Hmm=0.9887640449438202
SEQF7448.1|AP014585.1	CCTyper	CDS	771467	771778	104	+	.	ID=SEQF7448.1|AP014585.1_725_cas;Genome_ID=SEQF7448.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.4e-50;Score=167.0;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF7448.1|AP014585.1	CCTyper	CDS	1199469	1201871	801	-	.	ID=SEQF7448.1|AP014585.1_1173_cas;Genome_ID=SEQF7448.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=1.2e-151;Score=503.1;Coverage_Seq=0.9363295880149812;Coverage_Hmm=0.9946308724832215
SEQF7448.1|AP014585.1	CCTyper	CDS	1195184	1195858	225	-	.	ID=SEQF7448.1|AP014585.1_1169_cas;Genome_ID=SEQF7448.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=-;E-value=5e-36;Score=120.8;Coverage_Seq=0.84;Coverage_Hmm=0.9833333333333333
SEQF7448.1|AP014585.1	CCTyper	CDS	1198608	1199336	243	-	.	ID=SEQF7448.1|AP014585.1_1172_cas;Genome_ID=SEQF7448.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=-;E-value=2e-101;Score=334.8;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF7448.1|AP014585.1	CCTyper	CDS	1195860	1196708	283	-	.	ID=SEQF7448.1|AP014585.1_1170_cas;Genome_ID=SEQF7448.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=-;E-value=2e-148;Score=489.9;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF7448.1|AP014585.1	CCTyper	CDS	1196713	1198608	632	-	.	ID=SEQF7448.1|AP014585.1_1171_cas;Genome_ID=SEQF7448.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=-;E-value=3.6e-179;Score=593.6;Coverage_Seq=0.9794303797468354;Coverage_Hmm=0.9982993197278912
SEQF7448.1|AP014585.1	CCTyper	CDS	766465	770571	1369	+	.	ID=SEQF7448.1|AP014585.1_723_cas;Genome_ID=SEQF7448.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1682.3;Coverage_Seq=0.9963476990504018;Coverage_Hmm=1.0
SEQF7448.1|AP014585.1	CCTyper	CDS	771768	772430	221	+	.	ID=SEQF7448.1|AP014585.1_726_cas;Genome_ID=SEQF7448.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=6.3e-109;Score=359.3;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973