SEQF7453.1|CP049696.1	CCTyper	repeat_region	562810	563170	361	+	.	ID=SEQF7453.1|CP049696.1_1;Genome_ID=SEQF7453.1;Note=Predictor:CCtyper;Start:562810;End:563170;Consensus_Repeat:GTCTCACCCTTCATGGGTGAGTGGATTGAAAT;Number_of_Repeats:6;Repeat_Length:32;Average_Spacer_Length:33.8;Repeat_Identity:96.0;Spacer_Identity:42.7;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.995;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7453.1|CP049696.1	CCTyper	direct_repeat	562810	562841	32	+	.	ID=SEQF7453.1|CP049696.1_1_REPEAT1;Parent=SEQF7453.1|CP049696.1_1;Note=GTCTCACCCTTCATGGGTGAGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7453.1|CP049696.1	CCTyper	binding_site	562842	562875	34	+	.	ID=SEQF7453.1|CP049696.1_1_SPACER1;Parent=SEQF7453.1|CP049696.1_1;Note=TACTAGCGTTGAGATAGCCGGTATTAATCTTACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7453.1|CP049696.1	CCTyper	direct_repeat	562876	562907	32	+	.	ID=SEQF7453.1|CP049696.1_1_REPEAT2;Parent=SEQF7453.1|CP049696.1_1;Note=GTCTCACCCTTCATGGGTGAGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7453.1|CP049696.1	CCTyper	binding_site	562908	562940	33	+	.	ID=SEQF7453.1|CP049696.1_1_SPACER2;Parent=SEQF7453.1|CP049696.1_1;Note=ATTTCGTCACCTCCTCAATCAATAATAGAGTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7453.1|CP049696.1	CCTyper	direct_repeat	562941	562972	32	+	.	ID=SEQF7453.1|CP049696.1_1_REPEAT3;Parent=SEQF7453.1|CP049696.1_1;Note=GTCTCACCCTTCATGGGTGAGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7453.1|CP049696.1	CCTyper	binding_site	562973	563007	35	+	.	ID=SEQF7453.1|CP049696.1_1_SPACER3;Parent=SEQF7453.1|CP049696.1_1;Note=CTAAGATGATACCAGTTACAATACCGATTTTAAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7453.1|CP049696.1	CCTyper	direct_repeat	563008	563039	32	+	.	ID=SEQF7453.1|CP049696.1_1_REPEAT4;Parent=SEQF7453.1|CP049696.1_1;Note=GTCTCACCCTTCATGGGTGAGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7453.1|CP049696.1	CCTyper	binding_site	563040	563073	34	+	.	ID=SEQF7453.1|CP049696.1_1_SPACER4;Parent=SEQF7453.1|CP049696.1_1;Note=AAATAATTACATGACTAGCCAATACACCCACATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7453.1|CP049696.1	CCTyper	direct_repeat	563074	563105	32	+	.	ID=SEQF7453.1|CP049696.1_1_REPEAT5;Parent=SEQF7453.1|CP049696.1_1;Note=GTCTCACCCTTTATGGGTGAGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7453.1|CP049696.1	CCTyper	binding_site	563106	563138	33	+	.	ID=SEQF7453.1|CP049696.1_1_SPACER5;Parent=SEQF7453.1|CP049696.1_1;Note=TTCATGAGCTTCTTTACTCTCAAAGTAAGAGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7453.1|CP049696.1	CCTyper	direct_repeat	563139	563170	32	+	.	ID=SEQF7453.1|CP049696.1_1_REPEAT6;Parent=SEQF7453.1|CP049696.1_1;Note=GTCTCACCCTTCATGGGTGAGTGGATTGAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7453.1|CP049696.1	CCTyper	OPERON	998744	1004718	5975	-	.	ID=SEQF7453.1|CP049696.1@25;Genome_ID=SEQF7453.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=952,953,954,955;E-values=7.70e-109,1.60e-50,3.20e-101,0.00e+00;CoverageSeq=0.982,0.99,0.928,0.996;CoverageHMM=0.995,0.905,0.996,1.0;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7453.1|CP049696.1	CCTyper	OPERON	555051	562661	7611	+	.	ID=SEQF7453.1|CP049696.1@13;Genome_ID=SEQF7453.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas3_1_CAS-I,Cas5_0_IC,Cas8c_0_IC,Cas7_2_CAS-I-C,Cas4_0_I-II,Cas1_0_IC,Cas2_4_CAS-I-II-III-IV-V-VI;Positions=501,503,504,505,506,507,508;E-values=9.60e-98,9.00e-101,5.10e-177,1.00e-146,6.40e-36,2.90e-147,3.60e-33;CoverageSeq=0.895,0.831,0.979,0.993,0.84,0.991,0.939;CoverageHMM=0.64,1.0,0.998,0.989,0.983,1.0,0.989;Strand_Interference=1;Strand_Adaptation=1
SEQF7453.1|CP049696.1	CCTyper	CDS	561332	562357	342	+	.	ID=SEQF7453.1|CP049696.1_507_cas;Genome_ID=SEQF7453.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=+;E-value=2.9e-147;Score=487.0;Coverage_Seq=0.9912280701754386;Coverage_Hmm=1.0
SEQF7453.1|CP049696.1	CCTyper	CDS	999734	1000603	290	-	.	ID=SEQF7453.1|CP049696.1_954_cas;Genome_ID=SEQF7453.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.2e-101;Score=334.9;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF7453.1|CP049696.1	CCTyper	CDS	562368	562661	98	+	.	ID=SEQF7453.1|CP049696.1_508_cas;Genome_ID=SEQF7453.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.6e-33;Score=110.6;Coverage_Seq=0.9387755102040817;Coverage_Hmm=0.9887640449438202
SEQF7453.1|CP049696.1	CCTyper	CDS	999396	999707	104	-	.	ID=SEQF7453.1|CP049696.1_953_cas;Genome_ID=SEQF7453.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.6e-50;Score=167.0;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF7453.1|CP049696.1	CCTyper	CDS	555051	556679	543	+	.	ID=SEQF7453.1|CP049696.1_501_cas;Genome_ID=SEQF7453.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=+;E-value=9.6e-98;Score=325.1;Coverage_Seq=0.8950276243093923;Coverage_Hmm=0.640268456375839
SEQF7453.1|CP049696.1	CCTyper	CDS	560661	561335	225	+	.	ID=SEQF7453.1|CP049696.1_506_cas;Genome_ID=SEQF7453.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=+;E-value=6.4e-36;Score=120.6;Coverage_Seq=0.84;Coverage_Hmm=0.9833333333333333
SEQF7453.1|CP049696.1	CCTyper	CDS	557183	557911	243	+	.	ID=SEQF7453.1|CP049696.1_503_cas;Genome_ID=SEQF7453.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=+;E-value=9e-101;Score=332.9;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF7453.1|CP049696.1	CCTyper	CDS	559811	560659	283	+	.	ID=SEQF7453.1|CP049696.1_505_cas;Genome_ID=SEQF7453.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=+;E-value=1e-146;Score=484.4;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF7453.1|CP049696.1	CCTyper	CDS	557911	559806	632	+	.	ID=SEQF7453.1|CP049696.1_504_cas;Genome_ID=SEQF7453.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=+;E-value=5.1e-177;Score=586.6;Coverage_Seq=0.9794303797468354;Coverage_Hmm=0.9982993197278912
SEQF7453.1|CP049696.1	CCTyper	CDS	1000603	1004718	1372	-	.	ID=SEQF7453.1|CP049696.1_955_cas;Genome_ID=SEQF7453.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1479.2;Coverage_Seq=0.9963556851311953;Coverage_Hmm=1.0
SEQF7453.1|CP049696.1	CCTyper	CDS	998744	999406	221	-	.	ID=SEQF7453.1|CP049696.1_952_cas;Genome_ID=SEQF7453.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=7.7e-109;Score=359.2;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973