SEQF7455.1|CP031618.1	CCTyper	repeat_region	605066	605227	162	+	.	ID=SEQF7455.1|CP031618.1_1;Genome_ID=SEQF7455.1;Note=Predictor:CCtyper;Start:605066;End:605227;Consensus_Repeat:GTCTCACCCTTCATGGGTGAGTGGATTGAAA;Number_of_Repeats:3;Repeat_Length:31;Average_Spacer_Length:34.5;Repeat_Identity:100.0;Spacer_Identity:40.8;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.989;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7455.1|CP031618.1	CCTyper	direct_repeat	605066	605096	31	+	.	ID=SEQF7455.1|CP031618.1_1_REPEAT1;Parent=SEQF7455.1|CP031618.1_1;Note=GTCTCACCCTTCATGGGTGAGTGGATTGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7455.1|CP031618.1	CCTyper	binding_site	605097	605131	35	+	.	ID=SEQF7455.1|CP031618.1_1_SPACER1;Parent=SEQF7455.1|CP031618.1_1;Note=TAAATAATTACATGACTAGCCAATACACCCACATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7455.1|CP031618.1	CCTyper	direct_repeat	605132	605162	31	+	.	ID=SEQF7455.1|CP031618.1_1_REPEAT2;Parent=SEQF7455.1|CP031618.1_1;Note=GTCTCACCCTTCATGGGTGAGTGGATTGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7455.1|CP031618.1	CCTyper	binding_site	605163	605196	34	+	.	ID=SEQF7455.1|CP031618.1_1_SPACER2;Parent=SEQF7455.1|CP031618.1_1;Note=TTTCATGAGCTTCTTTACTCTCAAAGTAAGAGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7455.1|CP031618.1	CCTyper	direct_repeat	605197	605227	31	+	.	ID=SEQF7455.1|CP031618.1_1_REPEAT3;Parent=SEQF7455.1|CP031618.1_1;Note=GTCTCACCCTTCATGGGTGAGTGGATTGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7455.1|CP031618.1	CCTyper	repeat_region	1111313	1111612	300	+	.	ID=SEQF7455.1|CP031618.1_2;Genome_ID=SEQF7455.1;Note=Predictor:CCtyper;Start:1111313;End:1111612;Consensus_Repeat:GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC;Number_of_Repeats:5;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:93.8;Spacer_Identity:41.9;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.998;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7455.1|CP031618.1	CCTyper	direct_repeat	1111313	1111348	36	+	.	ID=SEQF7455.1|CP031618.1_2_REPEAT1;Parent=SEQF7455.1|CP031618.1_2;Note=GAATGGAGACCATTCAAAACAGCATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7455.1|CP031618.1	CCTyper	binding_site	1111349	1111378	30	+	.	ID=SEQF7455.1|CP031618.1_2_SPACER1;Parent=SEQF7455.1|CP031618.1_2;Note=GGAAAGCAGGAGAAAGGACGTTAATATGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7455.1|CP031618.1	CCTyper	direct_repeat	1111379	1111414	36	+	.	ID=SEQF7455.1|CP031618.1_2_REPEAT2;Parent=SEQF7455.1|CP031618.1_2;Note=GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7455.1|CP031618.1	CCTyper	binding_site	1111415	1111444	30	+	.	ID=SEQF7455.1|CP031618.1_2_SPACER2;Parent=SEQF7455.1|CP031618.1_2;Note=GTCAAACTCAATTTTTTGTCTAGCTCTATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7455.1|CP031618.1	CCTyper	direct_repeat	1111445	1111480	36	+	.	ID=SEQF7455.1|CP031618.1_2_REPEAT3;Parent=SEQF7455.1|CP031618.1_2;Note=GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7455.1|CP031618.1	CCTyper	binding_site	1111481	1111510	30	+	.	ID=SEQF7455.1|CP031618.1_2_SPACER3;Parent=SEQF7455.1|CP031618.1_2;Note=AGACAAAAGAAAAAGCATTGTCAATTTCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7455.1|CP031618.1	CCTyper	direct_repeat	1111511	1111546	36	+	.	ID=SEQF7455.1|CP031618.1_2_REPEAT4;Parent=SEQF7455.1|CP031618.1_2;Note=GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7455.1|CP031618.1	CCTyper	binding_site	1111547	1111576	30	+	.	ID=SEQF7455.1|CP031618.1_2_SPACER4;Parent=SEQF7455.1|CP031618.1_2;Note=AATAATCAGTTTAAAAATCCATCTGGAGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7455.1|CP031618.1	CCTyper	direct_repeat	1111577	1111612	36	+	.	ID=SEQF7455.1|CP031618.1_2_REPEAT5;Parent=SEQF7455.1|CP031618.1_2;Note=GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7455.1|CP031618.1	CCTyper	OPERON	596898	604917	8020	+	.	ID=SEQF7455.1|CP031618.1@13;Genome_ID=SEQF7455.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas3_1_CAS-I,Cas5_0_IC,Cas8c_0_IC,Cas7_2_CAS-I-C,Cas4_0_I-II,Cas1_0_IC,Cas2_4_CAS-I-II-III-IV-V-VI;Positions=541,542,543,544,545,546,547;E-values=4.10e-150,2.30e-101,3.70e-177,4.90e-148,6.40e-36,2.90e-147,3.60e-33;CoverageSeq=0.934,0.831,0.979,0.993,0.84,0.991,0.939;CoverageHMM=0.995,1.0,0.998,0.989,0.983,1.0,0.989;Strand_Interference=1;Strand_Adaptation=1
SEQF7455.1|CP031618.1	CCTyper	OPERON	1111715	1117680	5966	-	.	ID=SEQF7455.1|CP031618.1@25;Genome_ID=SEQF7455.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=1063,1064,1065,1066;E-values=2.50e-108,1.60e-50,6.80e-104,0.00e+00;CoverageSeq=0.982,0.99,0.928,0.996;CoverageHMM=0.995,0.905,0.996,1.0;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7455.1|CP031618.1	CCTyper	CDS	603588	604613	342	+	.	ID=SEQF7455.1|CP031618.1_546_cas;Genome_ID=SEQF7455.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=+;E-value=2.9e-147;Score=487.0;Coverage_Seq=0.9912280701754386;Coverage_Hmm=1.0
SEQF7455.1|CP031618.1	CCTyper	CDS	1112705	1113574	290	-	.	ID=SEQF7455.1|CP031618.1_1065_cas;Genome_ID=SEQF7455.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.8e-104;Score=343.6;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF7455.1|CP031618.1	CCTyper	CDS	604624	604917	98	+	.	ID=SEQF7455.1|CP031618.1_547_cas;Genome_ID=SEQF7455.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.6e-33;Score=110.6;Coverage_Seq=0.9387755102040817;Coverage_Hmm=0.9887640449438202
SEQF7455.1|CP031618.1	CCTyper	CDS	1112367	1112678	104	-	.	ID=SEQF7455.1|CP031618.1_1064_cas;Genome_ID=SEQF7455.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.6e-50;Score=167.0;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF7455.1|CP031618.1	CCTyper	CDS	596898	599306	803	+	.	ID=SEQF7455.1|CP031618.1_541_cas;Genome_ID=SEQF7455.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=+;E-value=4.1e-150;Score=498.2;Coverage_Seq=0.933997509339975;Coverage_Hmm=0.9946308724832215
SEQF7455.1|CP031618.1	CCTyper	CDS	602917	603591	225	+	.	ID=SEQF7455.1|CP031618.1_545_cas;Genome_ID=SEQF7455.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=+;E-value=6.4e-36;Score=120.6;Coverage_Seq=0.84;Coverage_Hmm=0.9833333333333333
SEQF7455.1|CP031618.1	CCTyper	CDS	599439	600167	243	+	.	ID=SEQF7455.1|CP031618.1_542_cas;Genome_ID=SEQF7455.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=+;E-value=2.3e-101;Score=334.8;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF7455.1|CP031618.1	CCTyper	CDS	602067	602915	283	+	.	ID=SEQF7455.1|CP031618.1_544_cas;Genome_ID=SEQF7455.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=+;E-value=4.9e-148;Score=488.8;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF7455.1|CP031618.1	CCTyper	CDS	600167	602062	632	+	.	ID=SEQF7455.1|CP031618.1_543_cas;Genome_ID=SEQF7455.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=+;E-value=3.7e-177;Score=587.1;Coverage_Seq=0.9794303797468354;Coverage_Hmm=0.9982993197278912
SEQF7455.1|CP031618.1	CCTyper	CDS	1113574	1117680	1369	-	.	ID=SEQF7455.1|CP031618.1_1066_cas;Genome_ID=SEQF7455.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1678.3;Coverage_Seq=0.9963476990504018;Coverage_Hmm=1.0
SEQF7455.1|CP031618.1	CCTyper	CDS	1111715	1112377	221	-	.	ID=SEQF7455.1|CP031618.1_1063_cas;Genome_ID=SEQF7455.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=2.5e-108;Score=357.5;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973