SEQF7460.1|LS483401.1	CCTyper	repeat_region	816143	816304	162	+	.	ID=SEQF7460.1|LS483401.1_1;Genome_ID=SEQF7460.1;Note=Predictor:CCtyper;Start:816143;End:816304;Consensus_Repeat:GTTTTAGAGCTATGCTGTTTTGAATGGTC;Number_of_Repeats:3;Repeat_Length:29;Average_Spacer_Length:37.5;Repeat_Identity:100.0;Spacer_Identity:53.1;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.996;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7460.1|LS483401.1	CCTyper	direct_repeat	816143	816171	29	+	.	ID=SEQF7460.1|LS483401.1_1_REPEAT1;Parent=SEQF7460.1|LS483401.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7460.1|LS483401.1	CCTyper	binding_site	816172	816209	38	+	.	ID=SEQF7460.1|LS483401.1_1_SPACER1;Parent=SEQF7460.1|LS483401.1_1;Note=CCAAAACGATTGACCACAACATCCAACGCTTAGGTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7460.1|LS483401.1	CCTyper	direct_repeat	816210	816238	29	+	.	ID=SEQF7460.1|LS483401.1_1_REPEAT2;Parent=SEQF7460.1|LS483401.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7460.1|LS483401.1	CCTyper	binding_site	816239	816275	37	+	.	ID=SEQF7460.1|LS483401.1_1_SPACER2;Parent=SEQF7460.1|LS483401.1_1;Note=CCAAAACAATAGAGCTAGACAAAAAATTGAGTTTGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7460.1|LS483401.1	CCTyper	direct_repeat	816276	816304	29	+	.	ID=SEQF7460.1|LS483401.1_1_REPEAT3;Parent=SEQF7460.1|LS483401.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7460.1|LS483401.1	CCTyper	repeat_region	1191904	1192134	231	+	.	ID=SEQF7460.1|LS483401.1_2;Genome_ID=SEQF7460.1;Note=Predictor:CCtyper;Start:1191904;End:1192134;Consensus_Repeat:ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Number_of_Repeats:4;Repeat_Length:32;Average_Spacer_Length:34.3;Repeat_Identity:97.0;Spacer_Identity:48.3;Spacer_Length_Sem:0.7;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.995;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7460.1|LS483401.1	CCTyper	direct_repeat	1191904	1191935	32	+	.	ID=SEQF7460.1|LS483401.1_2_REPEAT1;Parent=SEQF7460.1|LS483401.1_2;Note=CTTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7460.1|LS483401.1	CCTyper	binding_site	1191936	1191968	33	+	.	ID=SEQF7460.1|LS483401.1_2_SPACER1;Parent=SEQF7460.1|LS483401.1_2;Note=AACTAATTCCGCAAAGGCATTGTTCATATAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7460.1|LS483401.1	CCTyper	direct_repeat	1191969	1192000	32	+	.	ID=SEQF7460.1|LS483401.1_2_REPEAT2;Parent=SEQF7460.1|LS483401.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7460.1|LS483401.1	CCTyper	binding_site	1192001	1192035	35	+	.	ID=SEQF7460.1|LS483401.1_2_SPACER2;Parent=SEQF7460.1|LS483401.1_2;Note=TTGCAAAATTTACGTGATAACTTTAATAAAATAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7460.1|LS483401.1	CCTyper	direct_repeat	1192036	1192067	32	+	.	ID=SEQF7460.1|LS483401.1_2_REPEAT3;Parent=SEQF7460.1|LS483401.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7460.1|LS483401.1	CCTyper	binding_site	1192068	1192102	35	+	.	ID=SEQF7460.1|LS483401.1_2_SPACER3;Parent=SEQF7460.1|LS483401.1_2;Note=CAAACGTAGCAAATTCTACTTTTACAAAAGTTGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7460.1|LS483401.1	CCTyper	direct_repeat	1192103	1192134	32	+	.	ID=SEQF7460.1|LS483401.1_2_REPEAT4;Parent=SEQF7460.1|LS483401.1_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7460.1|LS483401.1	CCTyper	OPERON	810075	816040	5966	+	.	ID=SEQF7460.1|LS483401.1@16;Genome_ID=SEQF7460.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=759,760,761,762;E-values=0.00e+00,6.10e-104,1.40e-50,2.20e-108;CoverageSeq=0.996,0.928,0.99,0.982;CoverageHMM=1.0,0.996,0.905,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF7460.1|LS483401.1	CCTyper	OPERON	1192283	1200302	8020	-	.	ID=SEQF7460.1|LS483401.1@23;Genome_ID=SEQF7460.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas2_4_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas4_0_I-II,Cas7_2_CAS-I-C,Cas8c_0_IC,Cas5_0_IC,Cas3_1_CAS-I;Positions=1127,1128,1129,1130,1131,1132,1133;E-values=3.30e-33,1.50e-148,5.10e-36,2.30e-146,7.60e-177,5.30e-101,3.70e-150;CoverageSeq=0.939,0.991,0.84,0.993,0.979,0.831,0.934;CoverageHMM=0.989,1.0,0.983,0.989,0.998,1.0,0.995;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7460.1|LS483401.1	CCTyper	CDS	1192587	1193612	342	-	.	ID=SEQF7460.1|LS483401.1_1128_cas;Genome_ID=SEQF7460.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=1.5e-148;Score=491.0;Coverage_Seq=0.9912280701754386;Coverage_Hmm=1.0
SEQF7460.1|LS483401.1	CCTyper	CDS	814181	815050	290	+	.	ID=SEQF7460.1|LS483401.1_760_cas;Genome_ID=SEQF7460.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.100000000000001e-104;Score=343.6;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF7460.1|LS483401.1	CCTyper	CDS	1192283	1192576	98	-	.	ID=SEQF7460.1|LS483401.1_1127_cas;Genome_ID=SEQF7460.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.3e-33;Score=110.6;Coverage_Seq=0.9387755102040817;Coverage_Hmm=0.9887640449438202
SEQF7460.1|LS483401.1	CCTyper	CDS	815077	815388	104	+	.	ID=SEQF7460.1|LS483401.1_761_cas;Genome_ID=SEQF7460.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.4e-50;Score=167.0;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF7460.1|LS483401.1	CCTyper	CDS	1197894	1200302	803	-	.	ID=SEQF7460.1|LS483401.1_1133_cas;Genome_ID=SEQF7460.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=3.7e-150;Score=498.2;Coverage_Seq=0.933997509339975;Coverage_Hmm=0.9946308724832215
SEQF7460.1|LS483401.1	CCTyper	CDS	1193609	1194283	225	-	.	ID=SEQF7460.1|LS483401.1_1129_cas;Genome_ID=SEQF7460.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=-;E-value=5.1000000000000004e-36;Score=120.8;Coverage_Seq=0.84;Coverage_Hmm=0.9833333333333333
SEQF7460.1|LS483401.1	CCTyper	CDS	1197033	1197761	243	-	.	ID=SEQF7460.1|LS483401.1_1132_cas;Genome_ID=SEQF7460.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=-;E-value=5.3e-101;Score=333.5;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF7460.1|LS483401.1	CCTyper	CDS	1194285	1195133	283	-	.	ID=SEQF7460.1|LS483401.1_1130_cas;Genome_ID=SEQF7460.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=-;E-value=2.3e-146;Score=483.1;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF7460.1|LS483401.1	CCTyper	CDS	1195138	1197033	632	-	.	ID=SEQF7460.1|LS483401.1_1131_cas;Genome_ID=SEQF7460.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=-;E-value=7.599999999999999e-177;Score=585.9;Coverage_Seq=0.9794303797468354;Coverage_Hmm=0.9982993197278912
SEQF7460.1|LS483401.1	CCTyper	CDS	810075	814181	1369	+	.	ID=SEQF7460.1|LS483401.1_759_cas;Genome_ID=SEQF7460.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1673.9;Coverage_Seq=0.9963476990504018;Coverage_Hmm=1.0
SEQF7460.1|LS483401.1	CCTyper	CDS	815378	816040	221	+	.	ID=SEQF7460.1|LS483401.1_762_cas;Genome_ID=SEQF7460.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=2.2e-108;Score=357.5;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973