SEQF7463.1|CP049690.1	CCTyper	repeat_region	1303530	1303890	361	+	.	ID=SEQF7463.1|CP049690.1_1;Genome_ID=SEQF7463.1;Note=Predictor:CCtyper;Start:1303530;End:1303890;Consensus_Repeat:ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Number_of_Repeats:6;Repeat_Length:32;Average_Spacer_Length:33.8;Repeat_Identity:96.0;Spacer_Identity:42.7;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.995;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7463.1|CP049690.1	CCTyper	direct_repeat	1303530	1303561	32	+	.	ID=SEQF7463.1|CP049690.1_1_REPEAT1;Parent=SEQF7463.1|CP049690.1_1;Note=CTTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7463.1|CP049690.1	CCTyper	binding_site	1303562	1303594	33	+	.	ID=SEQF7463.1|CP049690.1_1_SPACER1;Parent=SEQF7463.1|CP049690.1_1;Note=CACTCTTACTTTGAGAGTAAAGAAGCTCATGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7463.1|CP049690.1	CCTyper	direct_repeat	1303595	1303626	32	+	.	ID=SEQF7463.1|CP049690.1_1_REPEAT2;Parent=SEQF7463.1|CP049690.1_1;Note=ATTTCAATCCACTCACCCATAAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7463.1|CP049690.1	CCTyper	binding_site	1303627	1303660	34	+	.	ID=SEQF7463.1|CP049690.1_1_SPACER2;Parent=SEQF7463.1|CP049690.1_1;Note=TATGTGGGTGTATTGGCTAGTCATGTAATTATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7463.1|CP049690.1	CCTyper	direct_repeat	1303661	1303692	32	+	.	ID=SEQF7463.1|CP049690.1_1_REPEAT3;Parent=SEQF7463.1|CP049690.1_1;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7463.1|CP049690.1	CCTyper	binding_site	1303693	1303727	35	+	.	ID=SEQF7463.1|CP049690.1_1_SPACER3;Parent=SEQF7463.1|CP049690.1_1;Note=GCTTAAAATCGGTATTGTAACTGGTATCATCTTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7463.1|CP049690.1	CCTyper	direct_repeat	1303728	1303759	32	+	.	ID=SEQF7463.1|CP049690.1_1_REPEAT4;Parent=SEQF7463.1|CP049690.1_1;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7463.1|CP049690.1	CCTyper	binding_site	1303760	1303792	33	+	.	ID=SEQF7463.1|CP049690.1_1_SPACER4;Parent=SEQF7463.1|CP049690.1_1;Note=TGACTCTATTATTGATTGAGGAGGTGACGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7463.1|CP049690.1	CCTyper	direct_repeat	1303793	1303824	32	+	.	ID=SEQF7463.1|CP049690.1_1_REPEAT5;Parent=SEQF7463.1|CP049690.1_1;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7463.1|CP049690.1	CCTyper	binding_site	1303825	1303858	34	+	.	ID=SEQF7463.1|CP049690.1_1_SPACER5;Parent=SEQF7463.1|CP049690.1_1;Note=GGTAAGATTAATACCGGCTATCTCAACGCTAGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7463.1|CP049690.1	CCTyper	direct_repeat	1303859	1303890	32	+	.	ID=SEQF7463.1|CP049690.1_1_REPEAT6;Parent=SEQF7463.1|CP049690.1_1;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7463.1|CP049690.1	CCTyper	OPERON	870878	876852	5975	+	.	ID=SEQF7463.1|CP049690.1@19;Genome_ID=SEQF7463.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=857,858,859,860;E-values=0.00e+00,3.10e-101,1.50e-50,7.50e-109;CoverageSeq=0.996,0.928,0.99,0.982;CoverageHMM=1.0,0.996,0.905,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF7463.1|CP049690.1	CCTyper	OPERON	1304039	1311649	7611	-	.	ID=SEQF7463.1|CP049690.1@30;Genome_ID=SEQF7463.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas2_4_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas4_0_I-II,Cas7_2_CAS-I-C,Cas8c_0_IC,Cas5_0_IC,Cas3_1_CAS-I;Positions=1288,1289,1290,1291,1292,1293,1295;E-values=3.50e-33,2.80e-147,6.20e-36,9.80e-147,5.00e-177,8.70e-101,9.40e-98;CoverageSeq=0.939,0.991,0.84,0.993,0.979,0.831,0.895;CoverageHMM=0.989,1.0,0.983,0.989,0.998,1.0,0.64;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7463.1|CP049690.1	CCTyper	CDS	1304343	1305368	342	-	.	ID=SEQF7463.1|CP049690.1_1289_cas;Genome_ID=SEQF7463.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=2.8e-147;Score=487.0;Coverage_Seq=0.9912280701754386;Coverage_Hmm=1.0
SEQF7463.1|CP049690.1	CCTyper	CDS	874993	875862	290	+	.	ID=SEQF7463.1|CP049690.1_858_cas;Genome_ID=SEQF7463.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.1000000000000004e-101;Score=334.9;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF7463.1|CP049690.1	CCTyper	CDS	1304039	1304332	98	-	.	ID=SEQF7463.1|CP049690.1_1288_cas;Genome_ID=SEQF7463.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.5e-33;Score=110.6;Coverage_Seq=0.9387755102040817;Coverage_Hmm=0.9887640449438202
SEQF7463.1|CP049690.1	CCTyper	CDS	875889	876200	104	+	.	ID=SEQF7463.1|CP049690.1_859_cas;Genome_ID=SEQF7463.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.5e-50;Score=167.0;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF7463.1|CP049690.1	CCTyper	CDS	1310021	1311649	543	-	.	ID=SEQF7463.1|CP049690.1_1295_cas;Genome_ID=SEQF7463.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=9.4e-98;Score=325.1;Coverage_Seq=0.8950276243093923;Coverage_Hmm=0.640268456375839
SEQF7463.1|CP049690.1	CCTyper	CDS	1305365	1306039	225	-	.	ID=SEQF7463.1|CP049690.1_1290_cas;Genome_ID=SEQF7463.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=-;E-value=6.2e-36;Score=120.6;Coverage_Seq=0.84;Coverage_Hmm=0.9833333333333333
SEQF7463.1|CP049690.1	CCTyper	CDS	1308789	1309517	243	-	.	ID=SEQF7463.1|CP049690.1_1293_cas;Genome_ID=SEQF7463.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=-;E-value=8.700000000000001e-101;Score=332.9;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF7463.1|CP049690.1	CCTyper	CDS	1306041	1306889	283	-	.	ID=SEQF7463.1|CP049690.1_1291_cas;Genome_ID=SEQF7463.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=-;E-value=9.799999999999999e-147;Score=484.4;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF7463.1|CP049690.1	CCTyper	CDS	1306894	1308789	632	-	.	ID=SEQF7463.1|CP049690.1_1292_cas;Genome_ID=SEQF7463.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=-;E-value=5e-177;Score=586.6;Coverage_Seq=0.9794303797468354;Coverage_Hmm=0.9982993197278912
SEQF7463.1|CP049690.1	CCTyper	CDS	870878	874993	1372	+	.	ID=SEQF7463.1|CP049690.1_857_cas;Genome_ID=SEQF7463.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1479.2;Coverage_Seq=0.9963556851311953;Coverage_Hmm=1.0
SEQF7463.1|CP049690.1	CCTyper	CDS	876190	876852	221	+	.	ID=SEQF7463.1|CP049690.1_860_cas;Genome_ID=SEQF7463.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=7.5e-109;Score=359.2;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973