SEQF7467.2|AP012491.2	CCTyper	repeat_region	798183	798416	234	+	.	ID=SEQF7467.2|AP012491.2_1;Genome_ID=SEQF7467.2;Note=Predictor:CCtyper;Start:798183;End:798416;Consensus_Repeat:GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Number_of_Repeats:4;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:92.3;Spacer_Identity:37.4;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.998;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	direct_repeat	798183	798218	36	+	.	ID=SEQF7467.2|AP012491.2_1_REPEAT1;Parent=SEQF7467.2|AP012491.2_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	binding_site	798219	798248	30	+	.	ID=SEQF7467.2|AP012491.2_1_SPACER1;Parent=SEQF7467.2|AP012491.2_1;Note=GGGTGGTTGGCTGACGCATCGCAATATTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	direct_repeat	798249	798284	36	+	.	ID=SEQF7467.2|AP012491.2_1_REPEAT2;Parent=SEQF7467.2|AP012491.2_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	binding_site	798285	798314	30	+	.	ID=SEQF7467.2|AP012491.2_1_SPACER2;Parent=SEQF7467.2|AP012491.2_1;Note=AGGAATATCCGCAATAATTAATTGCGCTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	direct_repeat	798315	798350	36	+	.	ID=SEQF7467.2|AP012491.2_1_REPEAT3;Parent=SEQF7467.2|AP012491.2_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	binding_site	798351	798380	30	+	.	ID=SEQF7467.2|AP012491.2_1_SPACER3;Parent=SEQF7467.2|AP012491.2_1;Note=TAAATTTGTTTAGCAGGTAAACCGTGCTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	direct_repeat	798381	798416	36	+	.	ID=SEQF7467.2|AP012491.2_1_REPEAT4;Parent=SEQF7467.2|AP012491.2_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCTCCATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	repeat_region	1258507	1258801	295	+	.	ID=SEQF7467.2|AP012491.2_2;Genome_ID=SEQF7467.2;Note=Predictor:CCtyper;Start:1258507;End:1258801;Consensus_Repeat:ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Number_of_Repeats:5;Repeat_Length:32;Average_Spacer_Length:33.8;Repeat_Identity:95.2;Spacer_Identity:39.2;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.995;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	direct_repeat	1258507	1258538	32	+	.	ID=SEQF7467.2|AP012491.2_2_REPEAT1;Parent=SEQF7467.2|AP012491.2_2;Note=CTTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	binding_site	1258539	1258571	33	+	.	ID=SEQF7467.2|AP012491.2_2_SPACER1;Parent=SEQF7467.2|AP012491.2_2;Note=GAGTTTACTCGCTCAAATCAAGGTATGCGGACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	direct_repeat	1258572	1258603	32	+	.	ID=SEQF7467.2|AP012491.2_2_REPEAT2;Parent=SEQF7467.2|AP012491.2_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	binding_site	1258604	1258637	34	+	.	ID=SEQF7467.2|AP012491.2_2_SPACER2;Parent=SEQF7467.2|AP012491.2_2;Note=GCTGTGACATTGCGGGATGTAATCAAAGTAAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	direct_repeat	1258638	1258669	32	+	.	ID=SEQF7467.2|AP012491.2_2_REPEAT3;Parent=SEQF7467.2|AP012491.2_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	binding_site	1258670	1258702	33	+	.	ID=SEQF7467.2|AP012491.2_2_SPACER3;Parent=SEQF7467.2|AP012491.2_2;Note=TAAAGCAAACCTAGCAGAAGCAGAAAATGACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	direct_repeat	1258703	1258734	32	+	.	ID=SEQF7467.2|AP012491.2_2_REPEAT4;Parent=SEQF7467.2|AP012491.2_2;Note=ATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	binding_site	1258735	1258769	35	+	.	ID=SEQF7467.2|AP012491.2_2_SPACER4;Parent=SEQF7467.2|AP012491.2_2;Note=CTGATGTAATTGGTGATTTTCGTGATATGCTTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	direct_repeat	1258770	1258801	32	+	.	ID=SEQF7467.2|AP012491.2_2_REPEAT5;Parent=SEQF7467.2|AP012491.2_2;Note=ATTTCGATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7467.2|AP012491.2	CCTyper	OPERON	1258950	1266963	8014	-	.	ID=SEQF7467.2|AP012491.2@29;Genome_ID=SEQF7467.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas2_4_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas4_0_I-II,Cas7_2_CAS-I-C,Cas8c_0_IC,Cas5_0_IC,Cas3_1_CAS-I;Positions=1238,1239,1240,1241,1242,1243,1244;E-values=3.50e-33,5.30e-148,5.30e-36,2.10e-148,3.90e-179,2.10e-101,1.30e-151;CoverageSeq=0.939,0.991,0.84,0.993,0.979,0.831,0.936;CoverageHMM=0.989,1.0,0.983,0.989,0.998,1.0,0.995;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7467.2|AP012491.2	CCTyper	OPERON	792115	798080	5966	+	.	ID=SEQF7467.2|AP012491.2@19;Genome_ID=SEQF7467.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=742,743,744,745;E-values=0.00e+00,6.50e-104,1.50e-50,6.70e-109;CoverageSeq=0.996,0.928,0.99,0.982;CoverageHMM=1.0,0.996,0.905,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF7467.2|AP012491.2	CCTyper	CDS	1259254	1260279	342	-	.	ID=SEQF7467.2|AP012491.2_1239_cas;Genome_ID=SEQF7467.2;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=5.3e-148;Score=489.3;Coverage_Seq=0.9912280701754386;Coverage_Hmm=1.0
SEQF7467.2|AP012491.2	CCTyper	CDS	796221	797090	290	+	.	ID=SEQF7467.2|AP012491.2_743_cas;Genome_ID=SEQF7467.2;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.5e-104;Score=343.6;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF7467.2|AP012491.2	CCTyper	CDS	1258950	1259243	98	-	.	ID=SEQF7467.2|AP012491.2_1238_cas;Genome_ID=SEQF7467.2;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.5e-33;Score=110.6;Coverage_Seq=0.9387755102040817;Coverage_Hmm=0.9887640449438202
SEQF7467.2|AP012491.2	CCTyper	CDS	797117	797428	104	+	.	ID=SEQF7467.2|AP012491.2_744_cas;Genome_ID=SEQF7467.2;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.5e-50;Score=167.0;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF7467.2|AP012491.2	CCTyper	CDS	1264561	1266963	801	-	.	ID=SEQF7467.2|AP012491.2_1244_cas;Genome_ID=SEQF7467.2;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=1.3e-151;Score=503.1;Coverage_Seq=0.9363295880149812;Coverage_Hmm=0.9946308724832215
SEQF7467.2|AP012491.2	CCTyper	CDS	1260276	1260950	225	-	.	ID=SEQF7467.2|AP012491.2_1240_cas;Genome_ID=SEQF7467.2;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=-;E-value=5.3000000000000005e-36;Score=120.8;Coverage_Seq=0.84;Coverage_Hmm=0.9833333333333333
SEQF7467.2|AP012491.2	CCTyper	CDS	1263700	1264428	243	-	.	ID=SEQF7467.2|AP012491.2_1243_cas;Genome_ID=SEQF7467.2;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=-;E-value=2.1e-101;Score=334.8;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF7467.2|AP012491.2	CCTyper	CDS	1260952	1261800	283	-	.	ID=SEQF7467.2|AP012491.2_1241_cas;Genome_ID=SEQF7467.2;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=-;E-value=2.1e-148;Score=489.9;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF7467.2|AP012491.2	CCTyper	CDS	1261805	1263700	632	-	.	ID=SEQF7467.2|AP012491.2_1242_cas;Genome_ID=SEQF7467.2;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=-;E-value=3.9e-179;Score=593.6;Coverage_Seq=0.9794303797468354;Coverage_Hmm=0.9982993197278912
SEQF7467.2|AP012491.2	CCTyper	CDS	792115	796221	1369	+	.	ID=SEQF7467.2|AP012491.2_742_cas;Genome_ID=SEQF7467.2;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1682.3;Coverage_Seq=0.9963476990504018;Coverage_Hmm=1.0
SEQF7467.2|AP012491.2	CCTyper	CDS	797418	798080	221	+	.	ID=SEQF7467.2|AP012491.2_745_cas;Genome_ID=SEQF7467.2;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=6.7e-109;Score=359.3;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973