SEQF7468.1|LS483359.1	CCTyper	repeat_region	799204	799569	366	+	.	ID=SEQF7468.1|LS483359.1_1;Genome_ID=SEQF7468.1;Note=Predictor:CCtyper;Start:799204;End:799569;Consensus_Repeat:GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Number_of_Repeats:6;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:91.9;Spacer_Identity:45.4;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.998;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	direct_repeat	799204	799239	36	+	.	ID=SEQF7468.1|LS483359.1_1_REPEAT1;Parent=SEQF7468.1|LS483359.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	binding_site	799240	799269	30	+	.	ID=SEQF7468.1|LS483359.1_1_SPACER1;Parent=SEQF7468.1|LS483359.1_1;Note=TATACTAAAAGCTCTTAGAAGCGAAATGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	direct_repeat	799270	799305	36	+	.	ID=SEQF7468.1|LS483359.1_1_REPEAT2;Parent=SEQF7468.1|LS483359.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	binding_site	799306	799335	30	+	.	ID=SEQF7468.1|LS483359.1_1_SPACER2;Parent=SEQF7468.1|LS483359.1_1;Note=TTCCTCGATGACAGCAACAGATGGATCTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	direct_repeat	799336	799371	36	+	.	ID=SEQF7468.1|LS483359.1_1_REPEAT3;Parent=SEQF7468.1|LS483359.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	binding_site	799372	799401	30	+	.	ID=SEQF7468.1|LS483359.1_1_SPACER3;Parent=SEQF7468.1|LS483359.1_1;Note=TCGCATTGCTAAAGTGAACAAAGGCAGTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	direct_repeat	799402	799437	36	+	.	ID=SEQF7468.1|LS483359.1_1_REPEAT4;Parent=SEQF7468.1|LS483359.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	binding_site	799438	799467	30	+	.	ID=SEQF7468.1|LS483359.1_1_SPACER4;Parent=SEQF7468.1|LS483359.1_1;Note=ACTACTTTTGCGAGTAGCTTAGCACGTCCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	direct_repeat	799468	799503	36	+	.	ID=SEQF7468.1|LS483359.1_1_REPEAT5;Parent=SEQF7468.1|LS483359.1_1;Note=GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	binding_site	799504	799533	30	+	.	ID=SEQF7468.1|LS483359.1_1_SPACER5;Parent=SEQF7468.1|LS483359.1_1;Note=GTGCCTGTGGAGGAATTGATGAACATGCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	direct_repeat	799534	799569	36	+	.	ID=SEQF7468.1|LS483359.1_1_REPEAT6;Parent=SEQF7468.1|LS483359.1_1;Note=GTTTTAGAGCTATGCTGTCTTGAATGGTCTCCATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	repeat_region	1191591	1192089	499	+	.	ID=SEQF7468.1|LS483359.1_2;Genome_ID=SEQF7468.1;Note=Predictor:CCtyper;Start:1191591;End:1192089;Consensus_Repeat:TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Number_of_Repeats:8;Repeat_Length:33;Average_Spacer_Length:33.6;Repeat_Identity:95.6;Spacer_Identity:42.0;Spacer_Length_Sem:0.7;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.977;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	direct_repeat	1191591	1191623	33	+	.	ID=SEQF7468.1|LS483359.1_2_REPEAT1;Parent=SEQF7468.1|LS483359.1_2;Note=TCTTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	binding_site	1191624	1191657	34	+	.	ID=SEQF7468.1|LS483359.1_2_SPACER1;Parent=SEQF7468.1|LS483359.1_2;Note=TTGAAAAAGCATTGGGAACGCTCAAAATCACACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	direct_repeat	1191658	1191690	33	+	.	ID=SEQF7468.1|LS483359.1_2_REPEAT2;Parent=SEQF7468.1|LS483359.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	binding_site	1191691	1191723	33	+	.	ID=SEQF7468.1|LS483359.1_2_SPACER2;Parent=SEQF7468.1|LS483359.1_2;Note=ATGATACTGTCACCAGATTGCCTCAAGAGGGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	direct_repeat	1191724	1191756	33	+	.	ID=SEQF7468.1|LS483359.1_2_REPEAT3;Parent=SEQF7468.1|LS483359.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGCGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	binding_site	1191757	1191788	32	+	.	ID=SEQF7468.1|LS483359.1_2_SPACER3;Parent=SEQF7468.1|LS483359.1_2;Note=CCGCATAGTTTTTAGGTGTCGCATTACCAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	direct_repeat	1191789	1191821	33	+	.	ID=SEQF7468.1|LS483359.1_2_REPEAT4;Parent=SEQF7468.1|LS483359.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	binding_site	1191822	1191853	32	+	.	ID=SEQF7468.1|LS483359.1_2_SPACER4;Parent=SEQF7468.1|LS483359.1_2;Note=GAATATAATCATCAAGGTTATCCTCGACAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	direct_repeat	1191854	1191886	33	+	.	ID=SEQF7468.1|LS483359.1_2_REPEAT5;Parent=SEQF7468.1|LS483359.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	binding_site	1191887	1191923	37	+	.	ID=SEQF7468.1|LS483359.1_2_SPACER5;Parent=SEQF7468.1|LS483359.1_2;Note=TGTACTATCAATTTCGTATTTTAGTAAAGTTTGTTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	direct_repeat	1191924	1191956	33	+	.	ID=SEQF7468.1|LS483359.1_2_REPEAT6;Parent=SEQF7468.1|LS483359.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	binding_site	1191957	1191991	35	+	.	ID=SEQF7468.1|LS483359.1_2_SPACER6;Parent=SEQF7468.1|LS483359.1_2;Note=AAGCTCATTAACGGCCCATCGCTGATATCATTGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	direct_repeat	1191992	1192024	33	+	.	ID=SEQF7468.1|LS483359.1_2_REPEAT7;Parent=SEQF7468.1|LS483359.1_2;Note=AATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	binding_site	1192025	1192056	32	+	.	ID=SEQF7468.1|LS483359.1_2_SPACER7;Parent=SEQF7468.1|LS483359.1_2;Note=ACACCTTCAACTGCTTTAATTCGTTTCACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	direct_repeat	1192057	1192089	33	+	.	ID=SEQF7468.1|LS483359.1_2_REPEAT8;Parent=SEQF7468.1|LS483359.1_2;Note=TATTTCAATCCACTCACCCATGAAGGGTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7468.1|LS483359.1	CCTyper	OPERON	1192238	1200258	8021	-	.	ID=SEQF7468.1|LS483359.1@25;Genome_ID=SEQF7468.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=22.0;Genes=Cas2_4_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas4_3_CAS-I-II-III-IV-V-VI,Cas4_5_CAS-I-II-III-IV-V-VI,Cas7_2_CAS-I-C,Cas8c_0_IC,Cas5_0_IC,Cas3_1_CAS-I;Positions=1120,1121,1122,1123,1124,1125,1126,1127;E-values=3.20e-33,2.00e-148,6.50e-20,7.70e-14,4.00e-148,8.50e-176,8.90e-101,2.70e-150;CoverageSeq=0.939,0.991,0.755,0.77,0.993,0.979,0.831,0.934;CoverageHMM=0.989,1.0,0.376,0.497,0.989,0.998,1.0,0.995;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7468.1|LS483359.1	CCTyper	OPERON	793136	799101	5966	+	.	ID=SEQF7468.1|LS483359.1@17;Genome_ID=SEQF7468.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=734,735,736,737;E-values=0.00e+00,5.90e-104,1.40e-50,9.10e-109;CoverageSeq=0.996,0.928,0.99,0.982;CoverageHMM=1.0,0.996,0.905,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF7468.1|LS483359.1	CCTyper	CDS	1192542	1193567	342	-	.	ID=SEQF7468.1|LS483359.1_1121_cas;Genome_ID=SEQF7468.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=2e-148;Score=490.6;Coverage_Seq=0.9912280701754386;Coverage_Hmm=1.0
SEQF7468.1|LS483359.1	CCTyper	CDS	797242	798111	290	+	.	ID=SEQF7468.1|LS483359.1_735_cas;Genome_ID=SEQF7468.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=5.9e-104;Score=343.6;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF7468.1|LS483359.1	CCTyper	CDS	1192238	1192531	98	-	.	ID=SEQF7468.1|LS483359.1_1120_cas;Genome_ID=SEQF7468.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.2000000000000005e-33;Score=110.6;Coverage_Seq=0.9387755102040817;Coverage_Hmm=0.9887640449438202
SEQF7468.1|LS483359.1	CCTyper	CDS	798138	798449	104	+	.	ID=SEQF7468.1|LS483359.1_736_cas;Genome_ID=SEQF7468.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.4e-50;Score=167.0;Coverage_Seq=0.9903846153846154;Coverage_Hmm=0.9051724137931034
SEQF7468.1|LS483359.1	CCTyper	CDS	1197850	1200258	803	-	.	ID=SEQF7468.1|LS483359.1_1127_cas;Genome_ID=SEQF7468.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=2.7e-150;Score=498.6;Coverage_Seq=0.933997509339975;Coverage_Hmm=0.9946308724832215
SEQF7468.1|LS483359.1	CCTyper	CDS	1193564	1193857	98	-	.	ID=SEQF7468.1|LS483359.1_1122_cas;Genome_ID=SEQF7468.1;Feature_type=CDS;Product=Cas Prediction : Cas4_3_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.5e-20;Score=68.6;Coverage_Seq=0.7551020408163265;Coverage_Hmm=0.3756345177664975
SEQF7468.1|LS483359.1	CCTyper	CDS	1193823	1194239	139	-	.	ID=SEQF7468.1|LS483359.1_1123_cas;Genome_ID=SEQF7468.1;Feature_type=CDS;Product=Cas Prediction : Cas4_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=7.7e-14;Score=48.7;Coverage_Seq=0.7697841726618705;Coverage_Hmm=0.4968944099378882
SEQF7468.1|LS483359.1	CCTyper	CDS	1196989	1197717	243	-	.	ID=SEQF7468.1|LS483359.1_1126_cas;Genome_ID=SEQF7468.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=-;E-value=8.9e-101;Score=332.7;Coverage_Seq=0.831275720164609;Coverage_Hmm=1.0
SEQF7468.1|LS483359.1	CCTyper	CDS	1194241	1195089	283	-	.	ID=SEQF7468.1|LS483359.1_1124_cas;Genome_ID=SEQF7468.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=-;E-value=4e-148;Score=488.8;Coverage_Seq=0.9929328621908127;Coverage_Hmm=0.9893992932862191
SEQF7468.1|LS483359.1	CCTyper	CDS	1195094	1196989	632	-	.	ID=SEQF7468.1|LS483359.1_1125_cas;Genome_ID=SEQF7468.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=-;E-value=8.5e-176;Score=582.4;Coverage_Seq=0.9794303797468354;Coverage_Hmm=0.9982993197278912
SEQF7468.1|LS483359.1	CCTyper	CDS	793136	797242	1369	+	.	ID=SEQF7468.1|LS483359.1_734_cas;Genome_ID=SEQF7468.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1669.2;Coverage_Seq=0.9963476990504018;Coverage_Hmm=1.0
SEQF7468.1|LS483359.1	CCTyper	CDS	798439	799101	221	+	.	ID=SEQF7468.1|LS483359.1_737_cas;Genome_ID=SEQF7468.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=9.1e-109;Score=358.7;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973