SEQF7562.1|JAHAVD010000003.1	CCTyper	repeat_region	43238	44191	954	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1;Genome_ID=SEQF7562.1;Note=Predictor:CCtyper;Start:43238;End:44191;Consensus_Repeat:GTATCACTTATACCTAAAATTACAGAGTACTAAAAC;Number_of_Repeats:15;Repeat_Length:36;Average_Spacer_Length:29.6;Repeat_Identity:98.9;Spacer_Identity:42.1;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.69;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	direct_repeat	43238	43273	36	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_REPEAT1;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GTATCATTTATACCTAAAATTACAGAGTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	binding_site	43274	43303	30	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_SPACER1;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GAACCGTGTCTTTTCTTACATCTTCAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	direct_repeat	43304	43339	36	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_REPEAT2;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GTATCACTTATACCTAAAATTACAGAGTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	binding_site	43340	43368	29	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_SPACER2;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=TTGGACAGACTGCATGGATTGAACACAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	direct_repeat	43369	43404	36	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_REPEAT3;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GTATCACTTATACCTAAAATTACAGAGTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	binding_site	43405	43434	30	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_SPACER3;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=CAGACGTCACTATCAACTCATTCGAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	direct_repeat	43435	43470	36	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_REPEAT4;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GTATCACTTATACCTAAAATTACAGAGTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	binding_site	43471	43499	29	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_SPACER4;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=TTCCAGCCATTGCAACAGCACCTAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	direct_repeat	43500	43535	36	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_REPEAT5;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GTATCACTTATACCTAAAATTACAGAGTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	binding_site	43536	43564	29	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_SPACER5;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=TAGGACTATGTCCTCTGTCTTTACCTTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	direct_repeat	43565	43600	36	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_REPEAT6;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GTATCACTTATACCTAAAATTACAGAGTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	binding_site	43601	43630	30	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_SPACER6;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=CTGGGAAAGTGATACTATTGATGTCATAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	direct_repeat	43631	43666	36	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_REPEAT7;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GTATCACTTATACCTAAAATTACAGAGTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	binding_site	43667	43695	29	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_SPACER7;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=ATCTTAGTTGATACGGTGTTTTTTTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	direct_repeat	43696	43731	36	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_REPEAT8;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GTATCACTTATACCTAAAATTACAGAGTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	binding_site	43732	43761	30	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_SPACER8;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=ACACTGCGATTAGAACGAGATATATAGGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	direct_repeat	43762	43797	36	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_REPEAT9;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GTATCACTTATACCTAAAATTACAGAGTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	binding_site	43798	43827	30	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_SPACER9;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=TTTTATTACGACGGTCAAAAATGGGTGGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	direct_repeat	43828	43863	36	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_REPEAT10;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GTATCACTTATACCTAAAATTACAGAGTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	binding_site	43864	43893	30	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_SPACER10;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GATATACAACTACCGCACTTGGAAAAGGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	direct_repeat	43894	43929	36	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_REPEAT11;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GTATCACTTATACCTAAAATTACAGAGTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	binding_site	43930	43958	29	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_SPACER11;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=TTACTACAACAATAATTGGCGTTTTCTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	direct_repeat	43959	43994	36	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_REPEAT12;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GTATCACTTATACCTAAAATTACAGAGTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	binding_site	43995	44024	30	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_SPACER12;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=CTGCTACTGCAATGATAGCTCCGCCACCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	direct_repeat	44025	44060	36	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_REPEAT13;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GTATCACTTATACCTAAAATTACAGAGTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	binding_site	44061	44090	30	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_SPACER13;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=CTGCTACTGCAATGATAGCTCCGCCACCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	direct_repeat	44091	44126	36	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_REPEAT14;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GTATCACTTATACCTAAAATTACAGAGTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	binding_site	44127	44155	29	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_SPACER14;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=ATATAATTTTAAAGACAAATGGACGAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	direct_repeat	44156	44191	36	+	.	ID=SEQF7562.1|JAHAVD010000003.1_1_REPEAT15;Parent=SEQF7562.1|JAHAVD010000003.1_1;Note=GTATCACTTATACCTAAAATTACAGAGTACTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7562.1|JAHAVD010000003.1	CCTyper	OPERON	37530	42927	5398	-	.	ID=SEQF7562.1|JAHAVD010000003.1@2;Genome_ID=SEQF7562.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=8.0;Genes=Csn2_8_CAS-II-A,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_0_II,Cas9_0_II;Positions=35,36,37,39;E-values=1.80e-139,3.70e-37,1.10e-86,2.70e-135;CoverageSeq=0.994,0.981,0.91,0.958;CoverageHMM=0.994,0.99,1.0,0.94;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7562.1|JAHAVD010000003.1	CCTyper	CDS	38857	39759	301	-	.	ID=SEQF7562.1|JAHAVD010000003.1_37_cas;Genome_ID=SEQF7562.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_II;coding_strand=-;E-value=1.1e-86;Score=287.7;Coverage_Seq=0.9102990033222591;Coverage_Hmm=1.0
SEQF7562.1|JAHAVD010000003.1	CCTyper	CDS	38544	38852	103	-	.	ID=SEQF7562.1|JAHAVD010000003.1_36_cas;Genome_ID=SEQF7562.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.7e-37;Score=123.7;Coverage_Seq=0.9805825242718447;Coverage_Hmm=0.9900990099009901
SEQF7562.1|JAHAVD010000003.1	CCTyper	CDS	40363	42927	855	-	.	ID=SEQF7562.1|JAHAVD010000003.1_39_cas;Genome_ID=SEQF7562.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=2.7e-135;Score=449.8;Coverage_Seq=0.9578947368421052;Coverage_Hmm=0.9397590361445783
SEQF7562.1|JAHAVD010000003.1	CCTyper	CDS	37530	38531	334	-	.	ID=SEQF7562.1|JAHAVD010000003.1_35_cas;Genome_ID=SEQF7562.1;Feature_type=CDS;Product=Cas Prediction : Csn2_8_CAS-II-A;coding_strand=-;E-value=1.8e-139;Score=461.7;Coverage_Seq=0.9940119760479041;Coverage_Hmm=0.9940298507462687