SEQF7606.1|RJOO01000004.1	CCTyper	repeat_region	184593	185946	1354	+	.	ID=SEQF7606.1|RJOO01000004.1_1;Genome_ID=SEQF7606.1;Note=Predictor:CCtyper;Start:184593;End:185946;Consensus_Repeat:GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Number_of_Repeats:21;Repeat_Length:32;Average_Spacer_Length:34.1;Repeat_Identity:98.8;Spacer_Identity:40.7;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.989;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	184593	184624	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT1;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	184625	184658	34	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER1;Parent=SEQF7606.1|RJOO01000004.1_1;Note=ATTACCCAAATTTTTTAGGTTATCCATTTTTTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	184659	184690	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT2;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	184691	184723	33	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER2;Parent=SEQF7606.1|RJOO01000004.1_1;Note=TGAAAATTACATTCATTTTCACATTAATATTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	184724	184755	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT3;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	184756	184789	34	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER3;Parent=SEQF7606.1|RJOO01000004.1_1;Note=ACCATCTTCATTTGTAATAATAATGTCGCCGCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	184790	184821	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT4;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	184822	184854	33	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER4;Parent=SEQF7606.1|RJOO01000004.1_1;Note=ATCTTTTTCTTACTCCTTATTAAATTCTGGCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	184855	184886	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT5;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	184887	184921	35	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER5;Parent=SEQF7606.1|RJOO01000004.1_1;Note=AAAACTTGGGAGCTATATTTTAAGTCACTAGCATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	184922	184953	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT6;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	184954	184990	37	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER6;Parent=SEQF7606.1|RJOO01000004.1_1;Note=TTGATTCGGTCTAACGCTTTTTTAATCCGTTCCAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	184991	185022	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT7;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	185023	185056	34	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER7;Parent=SEQF7606.1|RJOO01000004.1_1;Note=ACGAATCGCATCGCGAATCTGTGCGGGATAGCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	185057	185088	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT8;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	185089	185121	33	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER8;Parent=SEQF7606.1|RJOO01000004.1_1;Note=AGTCGAACCAGAACAAAAAGAGGAATCAATCCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	185122	185153	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT9;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	185154	185187	34	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER9;Parent=SEQF7606.1|RJOO01000004.1_1;Note=TTTGAGTCTATCAATGATACTAATATTGATCGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	185188	185219	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT10;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	185220	185254	35	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER10;Parent=SEQF7606.1|RJOO01000004.1_1;Note=TTTTTTGCTTCTTTTAGCTTTTGCCTCGTCAAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	185255	185286	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT11;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	185287	185321	35	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER11;Parent=SEQF7606.1|RJOO01000004.1_1;Note=CAGAAAACACGATTGACTTCTGTCACTTCTACCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	185322	185353	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT12;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	185354	185386	33	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER12;Parent=SEQF7606.1|RJOO01000004.1_1;Note=AAATAGCGAGAACGCGCTGAACTGTAGAGATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	185387	185418	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT13;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	185419	185452	34	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER13;Parent=SEQF7606.1|RJOO01000004.1_1;Note=TAAAAAAGTATAAATTAAGCGGTTGGTTCCCTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	185453	185484	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT14;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	185485	185518	34	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER14;Parent=SEQF7606.1|RJOO01000004.1_1;Note=TTTACAATTAGCAGAATGAGTAGAAAATACTGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	185519	185550	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT15;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	185551	185584	34	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER15;Parent=SEQF7606.1|RJOO01000004.1_1;Note=CAGTGCCATTTGCGTTGAATACATGCCTAAATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	185585	185616	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT16;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	185617	185651	35	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER16;Parent=SEQF7606.1|RJOO01000004.1_1;Note=TGGCGTTTCACAAATTAGGTGTGCAGGTCTACACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	185652	185683	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT17;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	185684	185717	34	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER17;Parent=SEQF7606.1|RJOO01000004.1_1;Note=ACTTCAATTTTAGAAAACTTGGCGGTTATGGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	185718	185749	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT18;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	185750	185782	33	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER18;Parent=SEQF7606.1|RJOO01000004.1_1;Note=AGGAAAAGTCTTACGGAAGAAAGAAAATCTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	185783	185814	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT19;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	185815	185847	33	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER19;Parent=SEQF7606.1|RJOO01000004.1_1;Note=AAACATTTTCTAAAACTATGCAGCAATACCCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	185848	185879	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT20;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	binding_site	185880	185914	35	+	.	ID=SEQF7606.1|RJOO01000004.1_1_SPACER20;Parent=SEQF7606.1|RJOO01000004.1_1;Note=TTTAGAAACCGAAGTTTCAGGGATAGCACTGCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	direct_repeat	185915	185946	32	+	.	ID=SEQF7606.1|RJOO01000004.1_1_REPEAT21;Parent=SEQF7606.1|RJOO01000004.1_1;Note=GTCGCACCCTTCGCGGATGCGTGGATTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7606.1|RJOO01000004.1	CCTyper	OPERON	176327	189238	12912	+	.	ID=SEQF7606.1|RJOO01000004.1@7;Genome_ID=SEQF7606.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas3_1_CAS-I,Cas5_0_IC,Cas8c_0_IC,Cas7_2_CAS-I-C,Cas4_0_I-II,Cas1_0_IC,Cas2_4_CAS-I-II-III-IV-V-VI,Cas3_0_CAS-I;Positions=168,169,170,171,172,173,174,177;E-values=3.00e-106,4.50e-91,2.30e-132,1.80e-125,3.70e-32,6.90e-143,2.90e-29,6.90e-08;CoverageSeq=0.888,0.827,0.978,0.993,0.844,0.988,0.929,0.645;CoverageHMM=0.953,0.995,0.997,0.989,0.983,0.997,0.978,0.547;Strand_Interference=1;Strand_Adaptation=1
SEQF7606.1|RJOO01000004.1	CCTyper	CDS	183117	184142	342	+	.	ID=SEQF7606.1|RJOO01000004.1_173_cas;Genome_ID=SEQF7606.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=+;E-value=6.9e-143;Score=472.6;Coverage_Seq=0.9883040935672515;Coverage_Hmm=0.9970588235294118
SEQF7606.1|RJOO01000004.1	CCTyper	CDS	184153	184446	98	+	.	ID=SEQF7606.1|RJOO01000004.1_174_cas;Genome_ID=SEQF7606.1;Feature_type=CDS;Product=Cas Prediction : Cas2_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.8999999999999997e-29;Score=98.1;Coverage_Seq=0.9285714285714286;Coverage_Hmm=0.9775280898876404
SEQF7606.1|RJOO01000004.1	CCTyper	CDS	187937	189238	434	+	.	ID=SEQF7606.1|RJOO01000004.1_177_cas;Genome_ID=SEQF7606.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=+;E-value=6.9e-08;Score=28.8;Coverage_Seq=0.6451612903225806;Coverage_Hmm=0.546742209631728
SEQF7606.1|RJOO01000004.1	CCTyper	CDS	176327	178717	797	+	.	ID=SEQF7606.1|RJOO01000004.1_168_cas;Genome_ID=SEQF7606.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=+;E-value=2.9999999999999997e-106;Score=353.3;Coverage_Seq=0.8883312421580929;Coverage_Hmm=0.9530201342281879
SEQF7606.1|RJOO01000004.1	CCTyper	CDS	182449	183120	224	+	.	ID=SEQF7606.1|RJOO01000004.1_172_cas;Genome_ID=SEQF7606.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=+;E-value=3.7e-32;Score=108.4;Coverage_Seq=0.84375;Coverage_Hmm=0.9833333333333333
SEQF7606.1|RJOO01000004.1	CCTyper	CDS	178963	179691	243	+	.	ID=SEQF7606.1|RJOO01000004.1_169_cas;Genome_ID=SEQF7606.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IC;coding_strand=+;E-value=4.5e-91;Score=301.3;Coverage_Seq=0.8271604938271605;Coverage_Hmm=0.9950738916256158
SEQF7606.1|RJOO01000004.1	CCTyper	CDS	181596	182447	284	+	.	ID=SEQF7606.1|RJOO01000004.1_171_cas;Genome_ID=SEQF7606.1;Feature_type=CDS;Product=Cas Prediction : Cas7_2_CAS-I-C;coding_strand=+;E-value=1.8e-125;Score=414.7;Coverage_Seq=0.9929577464788732;Coverage_Hmm=0.9893992932862191
SEQF7606.1|RJOO01000004.1	CCTyper	CDS	179691	181592	634	+	.	ID=SEQF7606.1|RJOO01000004.1_170_cas;Genome_ID=SEQF7606.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_IC;coding_strand=+;E-value=2.3e-132;Score=439.2;Coverage_Seq=0.9779179810725552;Coverage_Hmm=0.9965986394557823