SEQF7788.1|CP023643.1	CCTyper	repeat_region	2545240	2546991	1752	+	.	ID=SEQF7788.1|CP023643.1_1;Genome_ID=SEQF7788.1;Note=Predictor:CCtyper;Start:2545240;End:2546991;Consensus_Repeat:GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Number_of_Repeats:27;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:96.9;Spacer_Identity:42.1;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.807;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2545240	2545275	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT1;Parent=SEQF7788.1|CP023643.1_1;Note=ATCTCTTAATCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2545276	2545305	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER1;Parent=SEQF7788.1|CP023643.1_1;Note=CGTGGGAATTATATGATATTCCGAGGCGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2545306	2545341	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT2;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2545342	2545371	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER2;Parent=SEQF7788.1|CP023643.1_1;Note=ACTTGGAAAGTACCAGCTTACGCAAAAGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2545372	2545407	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT3;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2545408	2545437	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER3;Parent=SEQF7788.1|CP023643.1_1;Note=ATAACTTTTGATAGTCTCGAATACTCACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2545438	2545473	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT4;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2545474	2545503	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER4;Parent=SEQF7788.1|CP023643.1_1;Note=TTAAGGCGATTGTTATATCCTGGAAACTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2545504	2545539	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT5;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2545540	2545569	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER5;Parent=SEQF7788.1|CP023643.1_1;Note=TTAAGGCGATTGTTATATCCTGGAAACTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2545570	2545605	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT6;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2545606	2545635	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER6;Parent=SEQF7788.1|CP023643.1_1;Note=TTAATAAAGATTACGAAAAAGAAATGCGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2545636	2545671	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT7;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2545672	2545701	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER7;Parent=SEQF7788.1|CP023643.1_1;Note=ATAACACCTAACATACCTGTTGCACCATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2545702	2545737	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT8;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2545738	2545767	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER8;Parent=SEQF7788.1|CP023643.1_1;Note=ATAACACCTAACATACCTGTTGCACCATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2545768	2545803	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT9;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2545804	2545833	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER9;Parent=SEQF7788.1|CP023643.1_1;Note=ATGTTTTGTGTTTTCTGCTTCCGTTAGCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2545834	2545869	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT10;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2545870	2545899	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER10;Parent=SEQF7788.1|CP023643.1_1;Note=ACATTTTTATTAGCTCGCTCCCAATTTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2545900	2545935	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT11;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2545936	2545965	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER11;Parent=SEQF7788.1|CP023643.1_1;Note=AAACGAGACAACGGAATACCGAATGCCGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2545966	2546001	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT12;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2546002	2546031	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER12;Parent=SEQF7788.1|CP023643.1_1;Note=GATAAGTCGGTCAAGATGTACATGGTATGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2546032	2546067	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT13;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2546068	2546097	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER13;Parent=SEQF7788.1|CP023643.1_1;Note=ATAGTTCCGAGGCTTGCCTAGCAAGGTACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2546098	2546133	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT14;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2546134	2546163	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER14;Parent=SEQF7788.1|CP023643.1_1;Note=TTCATGATAATTATTCCTTTGGACGTTCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2546164	2546199	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT15;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2546200	2546229	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER15;Parent=SEQF7788.1|CP023643.1_1;Note=ATAACCCAGCCTTTTTTGGTAGCTAGTGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2546230	2546265	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT16;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2546266	2546295	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER16;Parent=SEQF7788.1|CP023643.1_1;Note=GATATGCAGTATTGGTTATTATTCTTAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2546296	2546331	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT17;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2546332	2546361	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER17;Parent=SEQF7788.1|CP023643.1_1;Note=ATAGAAGACCAATTGTTATAAAGATACATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2546362	2546397	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT18;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2546398	2546427	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER18;Parent=SEQF7788.1|CP023643.1_1;Note=TCAGGAGCAGCGGTCGTGACATTCACATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2546428	2546463	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT19;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2546464	2546493	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER19;Parent=SEQF7788.1|CP023643.1_1;Note=ACTCAATTGGGTATAAATCACCTGAGATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2546494	2546529	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT20;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2546530	2546559	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER20;Parent=SEQF7788.1|CP023643.1_1;Note=TCAGGGATATAGAGCGCTTTTGTTGATTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2546560	2546595	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT21;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2546596	2546625	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER21;Parent=SEQF7788.1|CP023643.1_1;Note=TTGTCGGACGTTATTTTGCGTTTTTGGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2546626	2546661	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT22;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2546662	2546691	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER22;Parent=SEQF7788.1|CP023643.1_1;Note=GAAGATGATAAGGAAATTGCTTTTAGTGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2546692	2546727	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT23;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2546728	2546757	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER23;Parent=SEQF7788.1|CP023643.1_1;Note=TCCGTCATCATGTCCGTTTCTCTGAAACCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2546758	2546793	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT24;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2546794	2546823	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER24;Parent=SEQF7788.1|CP023643.1_1;Note=TTCATGATAATTATTCCTTTGGACGTTCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2546824	2546859	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT25;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2546860	2546889	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER25;Parent=SEQF7788.1|CP023643.1_1;Note=TTAGTAAAAAAACGGGTGTGCCACTAAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2546890	2546925	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT26;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	binding_site	2546926	2546955	30	+	.	ID=SEQF7788.1|CP023643.1_1_SPACER26;Parent=SEQF7788.1|CP023643.1_1;Note=ACAACGATTGACACACCTAACTTTGAAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	direct_repeat	2546956	2546991	36	+	.	ID=SEQF7788.1|CP023643.1_1_REPEAT27;Parent=SEQF7788.1|CP023643.1_1;Note=GTTTTAATACCATTCAATTTAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF7788.1|CP023643.1	CCTyper	OPERON	2547050	2552966	5917	-	.	ID=SEQF7788.1|CP023643.1@59;Genome_ID=SEQF7788.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=10.0;Genes=Csn2_0_IIA,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II;Positions=2352,2353,2354,2355;E-values=8.50e-40,8.70e-33,6.10e-94,1.10e-189;CoverageSeq=0.978,0.991,0.921,0.781;CoverageHMM=0.995,1.0,0.996,0.987;Strand_Interference=-1;Strand_Adaptation=-1
SEQF7788.1|CP023643.1	CCTyper	CDS	2548059	2548931	291	-	.	ID=SEQF7788.1|CP023643.1_2354_cas;Genome_ID=SEQF7788.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.1e-94;Score=311.4;Coverage_Seq=0.9209621993127147;Coverage_Hmm=0.9963636363636363
SEQF7788.1|CP023643.1	CCTyper	CDS	2547730	2548047	106	-	.	ID=SEQF7788.1|CP023643.1_2353_cas;Genome_ID=SEQF7788.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.7e-33;Score=109.7;Coverage_Seq=0.9905660377358491;Coverage_Hmm=1.0
SEQF7788.1|CP023643.1	CCTyper	CDS	2548947	2552966	1340	-	.	ID=SEQF7788.1|CP023643.1_2355_cas;Genome_ID=SEQF7788.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=1.0999999999999999e-189;Score=629.7;Coverage_Seq=0.7813432835820896;Coverage_Hmm=0.9867469879518073
SEQF7788.1|CP023643.1	CCTyper	CDS	2547050	2547733	228	-	.	ID=SEQF7788.1|CP023643.1_2352_cas;Genome_ID=SEQF7788.1;Feature_type=CDS;Product=Cas Prediction : Csn2_0_IIA;coding_strand=-;E-value=8.5e-40;Score=133.8;Coverage_Seq=0.9780701754385965;Coverage_Hmm=0.9954954954954955