SEQF8015.1|LGOY01000003.1	CCTyper	repeat_region	57700	58641	942	+	.	ID=SEQF8015.1|LGOY01000003.1_1;Genome_ID=SEQF8015.1;Note=Predictor:CCtyper;Start:57700;End:58641;Consensus_Repeat:GGATCACCCCCGCGTATGCGGGAAAGAC;Number_of_Repeats:16;Repeat_Length:28;Average_Spacer_Length:32.9;Repeat_Identity:98.6;Spacer_Identity:40.9;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.998;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	direct_repeat	57700	57727	28	+	.	ID=SEQF8015.1|LGOY01000003.1_1_REPEAT1;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GTATCACCCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	binding_site	57728	57760	33	+	.	ID=SEQF8015.1|LGOY01000003.1_1_SPACER1;Parent=SEQF8015.1|LGOY01000003.1_1;Note=TCCCGTCTTTTGTAATTGCCCTTAAAGGCACTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	direct_repeat	57761	57788	28	+	.	ID=SEQF8015.1|LGOY01000003.1_1_REPEAT2;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GGATCACCCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	binding_site	57789	57821	33	+	.	ID=SEQF8015.1|LGOY01000003.1_1_SPACER2;Parent=SEQF8015.1|LGOY01000003.1_1;Note=CAGAATACTTTGTGAATGCTGTAAAAGACTATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	direct_repeat	57822	57849	28	+	.	ID=SEQF8015.1|LGOY01000003.1_1_REPEAT3;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GGATCACCCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	binding_site	57850	57882	33	+	.	ID=SEQF8015.1|LGOY01000003.1_1_SPACER3;Parent=SEQF8015.1|LGOY01000003.1_1;Note=TCCGCTACTTGTCTTTCCGCCTTAAATGGCACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	direct_repeat	57883	57910	28	+	.	ID=SEQF8015.1|LGOY01000003.1_1_REPEAT4;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GGATCACCCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	binding_site	57911	57943	33	+	.	ID=SEQF8015.1|LGOY01000003.1_1_SPACER4;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GATAGCATCAGCCACGTGTGCAAAAAGCTCGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	direct_repeat	57944	57971	28	+	.	ID=SEQF8015.1|LGOY01000003.1_1_REPEAT5;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GGATCACCCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	binding_site	57972	58004	33	+	.	ID=SEQF8015.1|LGOY01000003.1_1_SPACER5;Parent=SEQF8015.1|LGOY01000003.1_1;Note=ATATCTGACGGCTTGACCACGCCGCGCCTGTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	direct_repeat	58005	58032	28	+	.	ID=SEQF8015.1|LGOY01000003.1_1_REPEAT6;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GGATCACCCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	binding_site	58033	58065	33	+	.	ID=SEQF8015.1|LGOY01000003.1_1_SPACER6;Parent=SEQF8015.1|LGOY01000003.1_1;Note=CGAAGCGTTCTAAAGGATAGTGATCTGCAATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	direct_repeat	58066	58093	28	+	.	ID=SEQF8015.1|LGOY01000003.1_1_REPEAT7;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GGATCACCCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	binding_site	58094	58126	33	+	.	ID=SEQF8015.1|LGOY01000003.1_1_SPACER7;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GCGGCTCGCGTTCCAAGATTCAATACTTTCACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	direct_repeat	58127	58154	28	+	.	ID=SEQF8015.1|LGOY01000003.1_1_REPEAT8;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GGATCACCCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	binding_site	58155	58187	33	+	.	ID=SEQF8015.1|LGOY01000003.1_1_SPACER8;Parent=SEQF8015.1|LGOY01000003.1_1;Note=CCGTTCTCGTCTAACATAATAGGCTCCTTTTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	direct_repeat	58188	58215	28	+	.	ID=SEQF8015.1|LGOY01000003.1_1_REPEAT9;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GGATCACCCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	binding_site	58216	58248	33	+	.	ID=SEQF8015.1|LGOY01000003.1_1_SPACER9;Parent=SEQF8015.1|LGOY01000003.1_1;Note=TGCCGTCCCCTTTATGAAGTCTTTTATATATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	direct_repeat	58249	58276	28	+	.	ID=SEQF8015.1|LGOY01000003.1_1_REPEAT10;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GGATCACCCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	binding_site	58277	58309	33	+	.	ID=SEQF8015.1|LGOY01000003.1_1_SPACER10;Parent=SEQF8015.1|LGOY01000003.1_1;Note=AGAGAATACTTTAAGCGTAGCGCATGTTATTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	direct_repeat	58310	58337	28	+	.	ID=SEQF8015.1|LGOY01000003.1_1_REPEAT11;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GGATCACCCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	binding_site	58338	58370	33	+	.	ID=SEQF8015.1|LGOY01000003.1_1_SPACER11;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GGGGCAATTACTAATTTTCAACTTGTATTCTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	direct_repeat	58371	58398	28	+	.	ID=SEQF8015.1|LGOY01000003.1_1_REPEAT12;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GGATCACCCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	binding_site	58399	58431	33	+	.	ID=SEQF8015.1|LGOY01000003.1_1_SPACER12;Parent=SEQF8015.1|LGOY01000003.1_1;Note=TACCCCCCGCATGGAGCGAGGGGCAATTACTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	direct_repeat	58432	58459	28	+	.	ID=SEQF8015.1|LGOY01000003.1_1_REPEAT13;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GGATCACCCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	binding_site	58460	58491	32	+	.	ID=SEQF8015.1|LGOY01000003.1_1_SPACER13;Parent=SEQF8015.1|LGOY01000003.1_1;Note=TAGTGGCGGCAGCTGGCAGGCGGAAGCAGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	direct_repeat	58492	58519	28	+	.	ID=SEQF8015.1|LGOY01000003.1_1_REPEAT14;Parent=SEQF8015.1|LGOY01000003.1_1;Note=AGGATCACCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	binding_site	58520	58552	33	+	.	ID=SEQF8015.1|LGOY01000003.1_1_SPACER14;Parent=SEQF8015.1|LGOY01000003.1_1;Note=ATAGGTCTCAAACCAAGTAAAGCGCGCTAGTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	direct_repeat	58553	58580	28	+	.	ID=SEQF8015.1|LGOY01000003.1_1_REPEAT15;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GGATCACCCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	binding_site	58581	58613	33	+	.	ID=SEQF8015.1|LGOY01000003.1_1_SPACER15;Parent=SEQF8015.1|LGOY01000003.1_1;Note=AGAGTCTGCTACGACACGCCAAAAAAGCCTTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	direct_repeat	58614	58641	28	+	.	ID=SEQF8015.1|LGOY01000003.1_1_REPEAT16;Parent=SEQF8015.1|LGOY01000003.1_1;Note=GGATCACCCCCGCGTATGCGGGAAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8015.1|LGOY01000003.1	CCTyper	OPERON	58749	68720	9972	-	.	ID=SEQF8015.1|LGOY01000003.1@3;Genome_ID=SEQF8015.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=50%;Best_type=I-E;Best_score=24.0;Genes=DEDDh_0_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas5_1_CAS-I-E,Cas7_1_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas8e_4_CAS-I-E,Cas3_0_CAS-I;Positions=45,46,47,48,49,50,51,52;E-values=6.20e-32,5.50e-107,7.70e-51,2.20e-40,5.80e-120,9.30e-59,5.60e-107,7.20e-69;CoverageSeq=0.472,0.857,0.968,0.565,0.95,0.956,0.882,0.443;CoverageHMM=0.994,0.996,0.995,0.994,0.997,0.945,0.987,0.989;Strand_Interference=-1;Strand_Adaptation=-1
SEQF8015.1|LGOY01000003.1	CCTyper	CDS	59830	60771	314	-	.	ID=SEQF8015.1|LGOY01000003.1_46_cas;Genome_ID=SEQF8015.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=5.5e-107;Score=353.1;Coverage_Seq=0.856687898089172;Coverage_Hmm=0.9962825278810409
SEQF8015.1|LGOY01000003.1	CCTyper	CDS	65865	68720	952	-	.	ID=SEQF8015.1|LGOY01000003.1_52_cas;Genome_ID=SEQF8015.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=-;E-value=7.199999999999999e-69;Score=228.7;Coverage_Seq=0.4432773109243697;Coverage_Hmm=0.9886685552407932
SEQF8015.1|LGOY01000003.1	CCTyper	CDS	61455	62330	292	-	.	ID=SEQF8015.1|LGOY01000003.1_48_cas;Genome_ID=SEQF8015.1;Feature_type=CDS;Product=Cas Prediction : Cas5_1_CAS-I-E;coding_strand=-;E-value=2.2e-40;Score=134.6;Coverage_Seq=0.565068493150685;Coverage_Hmm=0.9944444444444445
SEQF8015.1|LGOY01000003.1	CCTyper	CDS	60807	61454	216	-	.	ID=SEQF8015.1|LGOY01000003.1_47_cas;Genome_ID=SEQF8015.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=7.7e-51;Score=169.4;Coverage_Seq=0.9675925925925926;Coverage_Hmm=0.995049504950495
SEQF8015.1|LGOY01000003.1	CCTyper	CDS	62389	63477	363	-	.	ID=SEQF8015.1|LGOY01000003.1_49_cas;Genome_ID=SEQF8015.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=-;E-value=5.8e-120;Score=397.1;Coverage_Seq=0.9504132231404959;Coverage_Hmm=0.9972144846796658
SEQF8015.1|LGOY01000003.1	CCTyper	CDS	64208	65878	557	-	.	ID=SEQF8015.1|LGOY01000003.1_51_cas;Genome_ID=SEQF8015.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=-;E-value=5.6e-107;Score=354.7;Coverage_Seq=0.881508078994614;Coverage_Hmm=0.9870967741935484
SEQF8015.1|LGOY01000003.1	CCTyper	CDS	63572	64186	205	-	.	ID=SEQF8015.1|LGOY01000003.1_50_cas;Genome_ID=SEQF8015.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=-;E-value=9.3e-59;Score=194.5;Coverage_Seq=0.9560975609756097;Coverage_Hmm=0.9447236180904522
SEQF8015.1|LGOY01000003.1	CCTyper	CDS	58749	59828	360	-	.	ID=SEQF8015.1|LGOY01000003.1_45_cas;Genome_ID=SEQF8015.1;Feature_type=CDS;Product=Cas Prediction : DEDDh_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.2e-32;Score=107.1;Coverage_Seq=0.4722222222222222;Coverage_Hmm=0.99375