SEQF8135.1|MSKK01000050.1	CCTyper	repeat_region	75317	75528	212	+	.	ID=SEQF8135.1|MSKK01000050.1_1;Genome_ID=SEQF8135.1;Note=Predictor:CCtyper;Start:75317;End:75528;Consensus_Repeat:GTCAGCCCCGCGTATGCGGGGGTAGAGGC;Number_of_Repeats:4;Repeat_Length:29;Average_Spacer_Length:32.0;Repeat_Identity:96.7;Spacer_Identity:45.5;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-G;Cas_Subtype_Prediction:I-G;Subtype_Probability:0.951;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000050.1	CCTyper	direct_repeat	75317	75345	29	+	.	ID=SEQF8135.1|MSKK01000050.1_1_REPEAT1;Parent=SEQF8135.1|MSKK01000050.1_1;Note=GTCAGCCCCGCGTATGCGGGGGTAGAGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000050.1	CCTyper	binding_site	75346	75377	32	+	.	ID=SEQF8135.1|MSKK01000050.1_1_SPACER1;Parent=SEQF8135.1|MSKK01000050.1_1;Note=AGGTCTGAGCAGCGCAAGGAAGGGCCCGGTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000050.1	CCTyper	direct_repeat	75378	75406	29	+	.	ID=SEQF8135.1|MSKK01000050.1_1_REPEAT2;Parent=SEQF8135.1|MSKK01000050.1_1;Note=GTCAGCCCCGCGTATGCGGGGGTAGAGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000050.1	CCTyper	binding_site	75407	75438	32	+	.	ID=SEQF8135.1|MSKK01000050.1_1_SPACER2;Parent=SEQF8135.1|MSKK01000050.1_1;Note=CGCACCGGTCAGGATGGTAAGAGCCAGAATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000050.1	CCTyper	direct_repeat	75439	75467	29	+	.	ID=SEQF8135.1|MSKK01000050.1_1_REPEAT3;Parent=SEQF8135.1|MSKK01000050.1_1;Note=GTCAGCCCCGCGTATGCGGGGGTAGAGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000050.1	CCTyper	binding_site	75468	75499	32	+	.	ID=SEQF8135.1|MSKK01000050.1_1_SPACER3;Parent=SEQF8135.1|MSKK01000050.1_1;Note=GGCGTCTTCGGTCCCGCGACGATTGGGCGTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000050.1	CCTyper	direct_repeat	75500	75528	29	+	.	ID=SEQF8135.1|MSKK01000050.1_1_REPEAT4;Parent=SEQF8135.1|MSKK01000050.1_1;Note=GTCAGCCCCGCGTATGCGGGGGTAGAGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	repeat_region	1397	2329	933	+	.	ID=SEQF8135.1|MSKK01000064.1_2;Genome_ID=SEQF8135.1;Note=Predictor:CCtyper;Start:1397;End:2329;Consensus_Repeat:GCTGGGAATCAGTCACCAGACCCCTTGATAGACTTC;Number_of_Repeats:15;Repeat_Length:36;Average_Spacer_Length:28.1;Repeat_Identity:97.9;Spacer_Identity:43.2;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.502;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	direct_repeat	1397	1432	36	+	.	ID=SEQF8135.1|MSKK01000064.1_2_REPEAT1;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GCTGGGATTTAGTCACCAGACCCCTTGATAGACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	binding_site	1433	1460	28	+	.	ID=SEQF8135.1|MSKK01000064.1_2_SPACER1;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GCCCTGAGGTCGCCCCGGAGGTGTTGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	direct_repeat	1461	1496	36	+	.	ID=SEQF8135.1|MSKK01000064.1_2_REPEAT2;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GCTGGGAATCAGTCACCAGACCCCTTGATAGACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	binding_site	1497	1524	28	+	.	ID=SEQF8135.1|MSKK01000064.1_2_SPACER2;Parent=SEQF8135.1|MSKK01000064.1_2;Note=TGACCTCCCAGTCCCTCACCCCCAACCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	direct_repeat	1525	1560	36	+	.	ID=SEQF8135.1|MSKK01000064.1_2_REPEAT3;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GCTGGGAATCAGTCACCAGACCCCTTGATAGACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	binding_site	1561	1588	28	+	.	ID=SEQF8135.1|MSKK01000064.1_2_SPACER3;Parent=SEQF8135.1|MSKK01000064.1_2;Note=CGGTACTGCGGGTACAGCGAGTTCCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	direct_repeat	1589	1624	36	+	.	ID=SEQF8135.1|MSKK01000064.1_2_REPEAT4;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GCTGGGAATCAGTCACCAGACCCCTTGATAGACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	binding_site	1625	1653	29	+	.	ID=SEQF8135.1|MSKK01000064.1_2_SPACER4;Parent=SEQF8135.1|MSKK01000064.1_2;Note=AGCGGGTTGAGCTCGGTGATGCCCATGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	direct_repeat	1654	1689	36	+	.	ID=SEQF8135.1|MSKK01000064.1_2_REPEAT5;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GCTGGGAATCAGTCACCAGACCCCTTGATAGACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	binding_site	1690	1717	28	+	.	ID=SEQF8135.1|MSKK01000064.1_2_SPACER5;Parent=SEQF8135.1|MSKK01000064.1_2;Note=ATGACGCGCATCCCCTTCTTCAGCGACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	direct_repeat	1718	1753	36	+	.	ID=SEQF8135.1|MSKK01000064.1_2_REPEAT6;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GCTGGGAATCAGTCACCAGACCCCTTGATAGACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	binding_site	1754	1781	28	+	.	ID=SEQF8135.1|MSKK01000064.1_2_SPACER6;Parent=SEQF8135.1|MSKK01000064.1_2;Note=CCTTCGCCGAGCTGGGGATCGTCGTGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	direct_repeat	1782	1817	36	+	.	ID=SEQF8135.1|MSKK01000064.1_2_REPEAT7;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GCTGGGAATCAGTCACCAGACCCCTTGATAGACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	binding_site	1818	1845	28	+	.	ID=SEQF8135.1|MSKK01000064.1_2_SPACER7;Parent=SEQF8135.1|MSKK01000064.1_2;Note=CCGACGCCAACATGCGCTCACCACGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	direct_repeat	1846	1881	36	+	.	ID=SEQF8135.1|MSKK01000064.1_2_REPEAT8;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GCTGGGAATCAGTCACCAGACCCCTTGATAGACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	binding_site	1882	1909	28	+	.	ID=SEQF8135.1|MSKK01000064.1_2_SPACER8;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GTCGTTCCCAGGCAGCCCAGGTCTCGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	direct_repeat	1910	1945	36	+	.	ID=SEQF8135.1|MSKK01000064.1_2_REPEAT9;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GCTGGGAATCAGTCACCAGACCCCTTGATAGACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	binding_site	1946	1973	28	+	.	ID=SEQF8135.1|MSKK01000064.1_2_SPACER9;Parent=SEQF8135.1|MSKK01000064.1_2;Note=TTCCAGATCTTGCAGGTAAGACCACCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	direct_repeat	1974	2009	36	+	.	ID=SEQF8135.1|MSKK01000064.1_2_REPEAT10;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GCTGGGAATCAGTCACCAGACCCCTTGATAGACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	binding_site	2010	2037	28	+	.	ID=SEQF8135.1|MSKK01000064.1_2_SPACER10;Parent=SEQF8135.1|MSKK01000064.1_2;Note=CACCACAGCCCACCGACCAGGACCACCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	direct_repeat	2038	2073	36	+	.	ID=SEQF8135.1|MSKK01000064.1_2_REPEAT11;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GCTGGGAATCAGTCACCAGACCCCTTGATAGACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	binding_site	2074	2101	28	+	.	ID=SEQF8135.1|MSKK01000064.1_2_SPACER11;Parent=SEQF8135.1|MSKK01000064.1_2;Note=CTCGGAGACATCCTCTACGACCTGGGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	direct_repeat	2102	2137	36	+	.	ID=SEQF8135.1|MSKK01000064.1_2_REPEAT12;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GCTGGGAATCAGTCACCAGACCCCTTGATAGACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	binding_site	2138	2165	28	+	.	ID=SEQF8135.1|MSKK01000064.1_2_SPACER12;Parent=SEQF8135.1|MSKK01000064.1_2;Note=CTCGGAGATTTGCTCTACCGGATCGGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	direct_repeat	2166	2201	36	+	.	ID=SEQF8135.1|MSKK01000064.1_2_REPEAT13;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GCTGGGAATCAGTCACCAGACCCCTTGATAGACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	binding_site	2202	2229	28	+	.	ID=SEQF8135.1|MSKK01000064.1_2_SPACER13;Parent=SEQF8135.1|MSKK01000064.1_2;Note=CCGAGGCCAGCGGGGTGTTGTCGAGGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	direct_repeat	2230	2265	36	+	.	ID=SEQF8135.1|MSKK01000064.1_2_REPEAT14;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GCTGGGAATCAGTCACCAGACCCCTTGATAGACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	binding_site	2266	2293	28	+	.	ID=SEQF8135.1|MSKK01000064.1_2_SPACER14;Parent=SEQF8135.1|MSKK01000064.1_2;Note=AGTGAGAGCATCCAGGCGACGTTAGTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000064.1	CCTyper	direct_repeat	2294	2329	36	+	.	ID=SEQF8135.1|MSKK01000064.1_2_REPEAT15;Parent=SEQF8135.1|MSKK01000064.1_2;Note=GCTGGGAATCAGTCACCAGACCCCTTGATAGACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000007.1	CCTyper	repeat_region	5020	5189	170	+	.	ID=SEQF8135.1|MSKK01000007.1-1_4;Genome_ID=SEQF8135.1;Note=Predictor:CCtyper;Start:5020;End:5189;Consensus_Repeat:GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC;Number_of_Repeats:3;Repeat_Length:32;Average_Spacer_Length:37.0;Repeat_Identity:68.4;Spacer_Identity:45.1;Spacer_Length_Sem:1.0;Trusted:True;Cas_Type_Prediction: III-D;Cas_Subtype_Prediction:III-D;Subtype_Probability:0.995;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000007.1	CCTyper	direct_repeat	5020	5056	37	+	.	ID=SEQF8135.1|MSKK01000007.1-1_4_REPEAT1;Parent=SEQF8135.1|MSKK01000007.1-1_4;Note=GTCAGAAAGCACCCAGCACCACAAGGTGTATTAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000007.1	CCTyper	binding_site	5057	5092	36	+	.	ID=SEQF8135.1|MSKK01000007.1-1_4_SPACER1;Parent=SEQF8135.1|MSKK01000007.1-1_4;Note=CTATGGCCAACCGTCAGGCGGTACCCGTTTTCTGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000007.1	CCTyper	direct_repeat	5093	5129	37	+	.	ID=SEQF8135.1|MSKK01000007.1-1_4_REPEAT2;Parent=SEQF8135.1|MSKK01000007.1-1_4;Note=GTCAGAAAGCACCCAGCACCACAAGGTGCATTAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000007.1	CCTyper	binding_site	5130	5167	38	+	.	ID=SEQF8135.1|MSKK01000007.1-1_4_SPACER2;Parent=SEQF8135.1|MSKK01000007.1-1_4;Note=AGAAAAGCGAAGACGCTATCTCCTGGGTTACCTCTTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000007.1	CCTyper	direct_repeat	5168	5189	22	+	.	ID=SEQF8135.1|MSKK01000007.1-1_4_REPEAT3;Parent=SEQF8135.1|MSKK01000007.1-1_4;Note=CAGAAAACACCCAGCACCAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8135.1|MSKK01000050.1	CCTyper	OPERON	68420	75298	6879	+	.	ID=SEQF8135.1|MSKK01000050.1@3;Genome_ID=SEQF8135.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-G;Complete_Interference=100%;Complete_Adaptation=0%;Best_type=I-G;Best_score=18.0;Genes=Cas3_0_IU,Cas8u2_2_CAS-I-U,Cas6e_1_CAS-I-II-III-IV-V-VI,Csb1_0_IU,Csb2gr5_0_CAS-I-U;Positions=57,58,59,60,61;E-values=0.00e+00,1.90e-159,1.60e-09,8.80e-75,2.50e-31;CoverageSeq=0.988,0.993,0.714,0.53,0.705;CoverageHMM=0.999,0.965,0.693,1.0,0.61;Strand_Interference=1;Strand_Adaptation=NA
SEQF8135.1|MSKK01000073.1	CCTyper	OPERON	705	5794	5090	+	.	ID=SEQF8135.1|MSKK01000073.1@1;Genome_ID=SEQF8135.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-G;Complete_Interference=50%;Complete_Adaptation=50%;Best_type=I-G;Best_score=11.0;Genes=Cas3_0_IU,Csb3_0_CAS-I-U,Cas4_0_I-II,Cas1_8_CAS-I-II-III-IV-V-VI;Positions=3,4,5,6;E-values=4.70e-94,4.80e-53,3.10e-20,2.10e-28;CoverageSeq=0.807,0.92,0.895,0.524;CoverageHMM=0.809,0.944,0.717,0.562;Strand_Interference=1;Strand_Adaptation=1
SEQF8135.1|MSKK01000073.1	CCTyper	CDS	4931	5794	288	+	.	ID=SEQF8135.1|MSKK01000073.1_6_cas;Genome_ID=SEQF8135.1;Feature_type=CDS;Product=Cas Prediction : Cas1_8_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.1e-28;Score=96.5;Coverage_Seq=0.5243055555555556;Coverage_Hmm=0.5618374558303887
SEQF8135.1|MSKK01000050.1	CCTyper	CDS	68420	71209	930	+	.	ID=SEQF8135.1|MSKK01000050.1_57_cas;Genome_ID=SEQF8135.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_IU;coding_strand=+;E-value=0.0;Score=1241.5;Coverage_Seq=0.9881720430107527;Coverage_Hmm=0.9988425925925926
SEQF8135.1|MSKK01000073.1	CCTyper	CDS	705	3392	896	+	.	ID=SEQF8135.1|MSKK01000073.1_3_cas;Genome_ID=SEQF8135.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_IU;coding_strand=+;E-value=4.7e-94;Score=313.1;Coverage_Seq=0.8069196428571429;Coverage_Hmm=0.8090277777777778
SEQF8135.1|MSKK01000073.1	CCTyper	CDS	4554	4982	143	+	.	ID=SEQF8135.1|MSKK01000073.1_5_cas;Genome_ID=SEQF8135.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=+;E-value=3.1e-20;Score=69.9;Coverage_Seq=0.8951048951048951;Coverage_Hmm=0.7166666666666667
SEQF8135.1|MSKK01000050.1	CCTyper	CDS	72138	72713	192	+	.	ID=SEQF8135.1|MSKK01000050.1_59_cas;Genome_ID=SEQF8135.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_1_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.6e-09;Score=35.3;Coverage_Seq=0.7135416666666666;Coverage_Hmm=0.6933962264150944
SEQF8135.1|MSKK01000050.1	CCTyper	CDS	71202	72113	304	+	.	ID=SEQF8135.1|MSKK01000050.1_58_cas;Genome_ID=SEQF8135.1;Feature_type=CDS;Product=Cas Prediction : Cas8u2_2_CAS-I-U;coding_strand=+;E-value=1.9e-159;Score=526.8;Coverage_Seq=0.993421052631579;Coverage_Hmm=0.964516129032258
SEQF8135.1|MSKK01000050.1	CCTyper	CDS	72778	73989	404	+	.	ID=SEQF8135.1|MSKK01000050.1_60_cas;Genome_ID=SEQF8135.1;Feature_type=CDS;Product=Cas Prediction : Csb1_0_IU;coding_strand=+;E-value=8.799999999999999e-75;Score=247.6;Coverage_Seq=0.5297029702970297;Coverage_Hmm=1.0
SEQF8135.1|MSKK01000050.1	CCTyper	CDS	73955	75298	448	+	.	ID=SEQF8135.1|MSKK01000050.1_61_cas;Genome_ID=SEQF8135.1;Feature_type=CDS;Product=Cas Prediction : Csb2gr5_0_CAS-I-U;coding_strand=+;E-value=2.4999999999999998e-31;Score=106.4;Coverage_Seq=0.7053571428571429;Coverage_Hmm=0.6104417670682731
SEQF8135.1|MSKK01000073.1	CCTyper	CDS	3392	4408	339	+	.	ID=SEQF8135.1|MSKK01000073.1_4_cas;Genome_ID=SEQF8135.1;Feature_type=CDS;Product=Cas Prediction : Csb3_0_CAS-I-U;coding_strand=+;E-value=4.799999999999999e-53;Score=177.8;Coverage_Seq=0.9203539823008849;Coverage_Hmm=0.9442815249266863