SEQF8155.1|JAGSWU010000001.1	CCTyper	repeat_region	264035	264566	532	+	.	ID=SEQF8155.1|JAGSWU010000001.1_1;Genome_ID=SEQF8155.1;Note=Predictor:CCtyper;Start:264035;End:264566;Consensus_Repeat:TCCCCTCTTTCTCGGGGCTCTTTTCGATT;Number_of_Repeats:8;Repeat_Length:29;Average_Spacer_Length:42.9;Repeat_Identity:83.8;Spacer_Identity:48.9;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.416;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000001.1	CCTyper	direct_repeat	264035	264063	29	+	.	ID=SEQF8155.1|JAGSWU010000001.1_1_REPEAT1;Parent=SEQF8155.1|JAGSWU010000001.1_1;Note=GTCCCCTCTTTTCGGGGCCATTATCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000001.1	CCTyper	binding_site	264064	264106	43	+	.	ID=SEQF8155.1|JAGSWU010000001.1_1_SPACER1;Parent=SEQF8155.1|JAGSWU010000001.1_1;Note=AGTTTAAAACGTTTTCTTAGTTGAAAGACAAAACGAGTTCTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000001.1	CCTyper	direct_repeat	264107	264135	29	+	.	ID=SEQF8155.1|JAGSWU010000001.1_1_REPEAT2;Parent=SEQF8155.1|JAGSWU010000001.1_1;Note=TCCTCTCTTTCTCGGGGCTATTATCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000001.1	CCTyper	binding_site	264136	264176	41	+	.	ID=SEQF8155.1|JAGSWU010000001.1_1_SPACER2;Parent=SEQF8155.1|JAGSWU010000001.1_1;Note=CAACACCAGAACAACAATCATATTTTGATATGGTGTTTTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000001.1	CCTyper	direct_repeat	264177	264205	29	+	.	ID=SEQF8155.1|JAGSWU010000001.1_1_REPEAT3;Parent=SEQF8155.1|JAGSWU010000001.1_1;Note=TCCCCTCTTTCTCGGGGCTCTTTTCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000001.1	CCTyper	binding_site	264206	264247	42	+	.	ID=SEQF8155.1|JAGSWU010000001.1_1_SPACER3;Parent=SEQF8155.1|JAGSWU010000001.1_1;Note=TGAAATATGGAGTGTACAGCGAAACTTAATTGGAGTTCTCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000001.1	CCTyper	direct_repeat	264248	264276	29	+	.	ID=SEQF8155.1|JAGSWU010000001.1_1_REPEAT4;Parent=SEQF8155.1|JAGSWU010000001.1_1;Note=CCCCCTATTTCTCGGGGCTCTTTTCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000001.1	CCTyper	binding_site	264277	264319	43	+	.	ID=SEQF8155.1|JAGSWU010000001.1_1_SPACER4;Parent=SEQF8155.1|JAGSWU010000001.1_1;Note=GTAAAGCAAGAGTATAAAAAGTCTTTGGAAGTCCAAGTTTTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000001.1	CCTyper	direct_repeat	264320	264348	29	+	.	ID=SEQF8155.1|JAGSWU010000001.1_1_REPEAT5;Parent=SEQF8155.1|JAGSWU010000001.1_1;Note=TCCCCTCTTTCTCGGGGCTCTTTTCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000001.1	CCTyper	binding_site	264349	264392	44	+	.	ID=SEQF8155.1|JAGSWU010000001.1_1_SPACER5;Parent=SEQF8155.1|JAGSWU010000001.1_1;Note=CAAAAAGTTTTTCACAACAATGTATTAATCATTATAAGTTCTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000001.1	CCTyper	direct_repeat	264393	264421	29	+	.	ID=SEQF8155.1|JAGSWU010000001.1_1_REPEAT6;Parent=SEQF8155.1|JAGSWU010000001.1_1;Note=TCCCCTCTTTCTCGGGGCCCTTATCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000001.1	CCTyper	binding_site	264422	264466	45	+	.	ID=SEQF8155.1|JAGSWU010000001.1_1_SPACER6;Parent=SEQF8155.1|JAGSWU010000001.1_1;Note=TTGAGAGCATGAAAACGCTGAAAGAGTTGAGAACGAACGTTTTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000001.1	CCTyper	direct_repeat	264467	264495	29	+	.	ID=SEQF8155.1|JAGSWU010000001.1_1_REPEAT7;Parent=SEQF8155.1|JAGSWU010000001.1_1;Note=TCCCCTCTTTCTCGGGGCTCTTTTCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000001.1	CCTyper	binding_site	264496	264537	42	+	.	ID=SEQF8155.1|JAGSWU010000001.1_1_SPACER7;Parent=SEQF8155.1|JAGSWU010000001.1_1;Note=GAGATAAGCGGCATATCAAGAAACGATCTAGAAAAGTTCTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000001.1	CCTyper	direct_repeat	264538	264566	29	+	.	ID=SEQF8155.1|JAGSWU010000001.1_1_REPEAT8;Parent=SEQF8155.1|JAGSWU010000001.1_1;Note=TCCCCTATTTGTCGGGGCTCTTTTCGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000008.1	CCTyper	repeat_region	74460	74695	236	+	.	ID=SEQF8155.1|JAGSWU010000008.1_2;Genome_ID=SEQF8155.1;Note=Predictor:CCtyper;Start:74460;End:74695;Consensus_Repeat:GTTTCATTCATACTTAAAATCACAGAGTACTAAAACTT;Number_of_Repeats:4;Repeat_Length:38;Average_Spacer_Length:28.0;Repeat_Identity:93.3;Spacer_Identity:42.5;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.416;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000008.1	CCTyper	direct_repeat	74460	74497	38	+	.	ID=SEQF8155.1|JAGSWU010000008.1_2_REPEAT1;Parent=SEQF8155.1|JAGSWU010000008.1_2;Note=GTTTCATTCATACTTAAAATCACAGAGTACTAAAACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000008.1	CCTyper	binding_site	74498	74525	28	+	.	ID=SEQF8155.1|JAGSWU010000008.1_2_SPACER1;Parent=SEQF8155.1|JAGSWU010000008.1_2;Note=CCGAGTTTCCCACTTCACCACTACCTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000008.1	CCTyper	direct_repeat	74526	74563	38	+	.	ID=SEQF8155.1|JAGSWU010000008.1_2_REPEAT2;Parent=SEQF8155.1|JAGSWU010000008.1_2;Note=GTTTCATTCATACTTAAAATCACAGAGTACTAAAACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000008.1	CCTyper	binding_site	74564	74591	28	+	.	ID=SEQF8155.1|JAGSWU010000008.1_2_SPACER2;Parent=SEQF8155.1|JAGSWU010000008.1_2;Note=TCCCTTATTCATTACAGCCTTAGCGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000008.1	CCTyper	direct_repeat	74592	74629	38	+	.	ID=SEQF8155.1|JAGSWU010000008.1_2_REPEAT3;Parent=SEQF8155.1|JAGSWU010000008.1_2;Note=GTTTCATTCATACTTAAAATCACAGAGTACTAAAACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000008.1	CCTyper	binding_site	74630	74657	28	+	.	ID=SEQF8155.1|JAGSWU010000008.1_2_SPACER3;Parent=SEQF8155.1|JAGSWU010000008.1_2;Note=GCATCAACGACTGAAAATACATTAAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000008.1	CCTyper	direct_repeat	74658	74695	38	+	.	ID=SEQF8155.1|JAGSWU010000008.1_2_REPEAT4;Parent=SEQF8155.1|JAGSWU010000008.1_2;Note=GTTTCATTCATACTTAAAATCACAGAGTACTAAATTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8155.1|JAGSWU010000001.1	CCTyper	OPERON	264689	273145	8457	-	.	ID=SEQF8155.1|JAGSWU010000001.1@8;Genome_ID=SEQF8155.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=20.0;Genes=Cas6_0_CAS-I-II-III-IV-V-VI,Csm6_0_IIIA,Csm5gr7_0_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_0_CAS-III-A,Cas10_1_CAS-III,Cas2_0_I-II-III,Cas1_4_CAS-I-II-III-IV-V-VI;Positions=236,237,238,239,240,241,242,243,244;E-values=9.00e-23,7.80e-108,3.80e-29,2.10e-48,9.30e-82,7.70e-24,1.20e-204,2.70e-22,2.40e-80;CoverageSeq=0.803,0.851,0.722,0.983,0.953,0.676,0.844,0.971,0.894;CoverageHMM=0.99,1.0,0.633,0.968,0.991,1.0,0.998,0.99,0.884;Strand_Interference=-1;Strand_Adaptation=NA
SEQF8155.1|JAGSWU010000001.1	CCTyper	CDS	269732	272005	758	-	.	ID=SEQF8155.1|JAGSWU010000001.1_242_cas;Genome_ID=SEQF8155.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=-;E-value=1.2e-204;Score=678.6;Coverage_Seq=0.8443271767810027;Coverage_Hmm=0.9984709480122325
SEQF8155.1|JAGSWU010000001.1	CCTyper	CDS	272324	273145	274	-	.	ID=SEQF8155.1|JAGSWU010000001.1_244_cas;Genome_ID=SEQF8155.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.4000000000000003e-80;Score=266.6;Coverage_Seq=0.8941605839416058;Coverage_Hmm=0.8836363636363637
SEQF8155.1|JAGSWU010000001.1	CCTyper	CDS	272019	272324	102	-	.	ID=SEQF8155.1|JAGSWU010000001.1_243_cas;Genome_ID=SEQF8155.1;Feature_type=CDS;Product=Cas Prediction : Cas2_0_I-II-III;coding_strand=-;E-value=2.7e-22;Score=75.9;Coverage_Seq=0.9705882352941176;Coverage_Hmm=0.9895833333333334
SEQF8155.1|JAGSWU010000001.1	CCTyper	CDS	264689	265435	249	-	.	ID=SEQF8155.1|JAGSWU010000001.1_236_cas;Genome_ID=SEQF8155.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=9.000000000000001e-23;Score=78.7;Coverage_Seq=0.8032128514056225;Coverage_Hmm=0.9896907216494846
SEQF8155.1|JAGSWU010000001.1	CCTyper	CDS	269304	269729	142	-	.	ID=SEQF8155.1|JAGSWU010000001.1_241_cas;Genome_ID=SEQF8155.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_0_CAS-III-A;coding_strand=-;E-value=7.7e-24;Score=81.5;Coverage_Seq=0.676056338028169;Coverage_Hmm=1.0
SEQF8155.1|JAGSWU010000001.1	CCTyper	CDS	268658	269302	215	-	.	ID=SEQF8155.1|JAGSWU010000001.1_240_cas;Genome_ID=SEQF8155.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=9.299999999999999e-82;Score=271.0;Coverage_Seq=0.9534883720930233;Coverage_Hmm=0.9906976744186047
SEQF8155.1|JAGSWU010000001.1	CCTyper	CDS	267739	268647	303	-	.	ID=SEQF8155.1|JAGSWU010000001.1_239_cas;Genome_ID=SEQF8155.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=2.1000000000000002e-48;Score=162.2;Coverage_Seq=0.9834983498349835;Coverage_Hmm=0.9682539682539683
SEQF8155.1|JAGSWU010000001.1	CCTyper	CDS	266731	267735	335	-	.	ID=SEQF8155.1|JAGSWU010000001.1_238_cas;Genome_ID=SEQF8155.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=-;E-value=3.8e-29;Score=99.1;Coverage_Seq=0.7223880597014926;Coverage_Hmm=0.6328767123287671
SEQF8155.1|JAGSWU010000001.1	CCTyper	CDS	265432	266703	424	-	.	ID=SEQF8155.1|JAGSWU010000001.1_237_cas;Genome_ID=SEQF8155.1;Feature_type=CDS;Product=Cas Prediction : Csm6_0_IIIA;coding_strand=-;E-value=7.8e-108;Score=357.6;Coverage_Seq=0.8514150943396226;Coverage_Hmm=1.0