SEQF8156.1|JAKREN010000016.1	CCTyper	repeat_region	33825	33990	166	+	.	ID=SEQF8156.1|JAKREN010000016.1_1;Genome_ID=SEQF8156.1;Note=Predictor:CCtyper;Start:33825;End:33990;Consensus_Repeat:GTTTCATTCATACTTAAAATCACAGAGTACTAAA;Number_of_Repeats:3;Repeat_Length:34;Average_Spacer_Length:32;Repeat_Identity:100.0;Spacer_Identity:45.5;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.293;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000016.1	CCTyper	direct_repeat	33825	33858	34	+	.	ID=SEQF8156.1|JAKREN010000016.1_1_REPEAT1;Parent=SEQF8156.1|JAKREN010000016.1_1;Note=GTTTCATTCATACTTAAAATCACAGAGTACTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000016.1	CCTyper	binding_site	33859	33890	32	+	.	ID=SEQF8156.1|JAKREN010000016.1_1_SPACER1;Parent=SEQF8156.1|JAKREN010000016.1_1;Note=ACTATCCCTTATTCATTACAGCCTTAGCGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000016.1	CCTyper	direct_repeat	33891	33924	34	+	.	ID=SEQF8156.1|JAKREN010000016.1_1_REPEAT2;Parent=SEQF8156.1|JAKREN010000016.1_1;Note=GTTTCATTCATACTTAAAATCACAGAGTACTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000016.1	CCTyper	binding_site	33925	33956	32	+	.	ID=SEQF8156.1|JAKREN010000016.1_1_SPACER2;Parent=SEQF8156.1|JAKREN010000016.1_1;Note=ACTTGCATCAACGACTGAAAATACATTAAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000016.1	CCTyper	direct_repeat	33957	33990	34	+	.	ID=SEQF8156.1|JAKREN010000016.1_1_REPEAT3;Parent=SEQF8156.1|JAKREN010000016.1_1;Note=GTTTCATTCATACTTAAAATCACAGAGTACTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	repeat_region	8652	9183	532	+	.	ID=SEQF8156.1|JAKREN010000024.1_2;Genome_ID=SEQF8156.1;Note=Predictor:CCtyper;Start:8652;End:9183;Consensus_Repeat:AATCGAAAAGAGCCCCGAGAAAGAGGGG;Number_of_Repeats:8;Repeat_Length:28;Average_Spacer_Length:44;Repeat_Identity:84.8;Spacer_Identity:49.6;Spacer_Length_Sem:0.6;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-A;Subtype_Probability:0.496;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	direct_repeat	8652	8679	28	+	.	ID=SEQF8156.1|JAKREN010000024.1_2_REPEAT1;Parent=SEQF8156.1|JAKREN010000024.1_2;Note=AATCGAAAAGAGCCCCGACAAATAGGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	binding_site	8680	8722	43	+	.	ID=SEQF8156.1|JAKREN010000024.1_2_SPACER1;Parent=SEQF8156.1|JAKREN010000024.1_2;Note=ACGAGAACTTTTCTAGATCGTTTCTTGATATGCCGCTTATCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	direct_repeat	8723	8750	28	+	.	ID=SEQF8156.1|JAKREN010000024.1_2_REPEAT2;Parent=SEQF8156.1|JAKREN010000024.1_2;Note=AATCGAAAAGAGCCCCGAGAAAGAGGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	binding_site	8751	8796	46	+	.	ID=SEQF8156.1|JAKREN010000024.1_2_SPACER2;Parent=SEQF8156.1|JAKREN010000024.1_2;Note=ACGAAAACGTTCGTTCTCAACTCTTTCAGCGTTTTCATGCTCTCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	direct_repeat	8797	8824	28	+	.	ID=SEQF8156.1|JAKREN010000024.1_2_REPEAT3;Parent=SEQF8156.1|JAKREN010000024.1_2;Note=AATCGATAAGGGCCCCGAGAAAGAGGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	binding_site	8825	8870	46	+	.	ID=SEQF8156.1|JAKREN010000024.1_2_SPACER3;Parent=SEQF8156.1|JAKREN010000024.1_2;Note=GACGAGAACTTATAATGATTAATACATTGTTGTGAAAAACTTTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	direct_repeat	8871	8898	28	+	.	ID=SEQF8156.1|JAKREN010000024.1_2_REPEAT4;Parent=SEQF8156.1|JAKREN010000024.1_2;Note=AATCGAAAAGAGCCCCGAGAAAGAGGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	binding_site	8899	8942	44	+	.	ID=SEQF8156.1|JAKREN010000024.1_2_SPACER4;Parent=SEQF8156.1|JAKREN010000024.1_2;Note=ACGAAAACTTGGACTTCCAAAGACTTTTTATACTCTTGCTTTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	direct_repeat	8943	8970	28	+	.	ID=SEQF8156.1|JAKREN010000024.1_2_REPEAT5;Parent=SEQF8156.1|JAKREN010000024.1_2;Note=AATCGAAAAGAGCCCCGAGAAATAGGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	binding_site	8971	9013	43	+	.	ID=SEQF8156.1|JAKREN010000024.1_2_SPACER5;Parent=SEQF8156.1|JAKREN010000024.1_2;Note=GACGAGAACTCCAATTAAGTTTCGCTGTACACTCCATATTTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	direct_repeat	9014	9041	28	+	.	ID=SEQF8156.1|JAKREN010000024.1_2_REPEAT6;Parent=SEQF8156.1|JAKREN010000024.1_2;Note=AATCGAAAAGAGCCCCGAGAAAGAGGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	binding_site	9042	9083	42	+	.	ID=SEQF8156.1|JAKREN010000024.1_2_SPACER6;Parent=SEQF8156.1|JAKREN010000024.1_2;Note=AAGAAAACACCATATCAAAATATGATTGTTGTTCTGGTGTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	direct_repeat	9084	9111	28	+	.	ID=SEQF8156.1|JAKREN010000024.1_2_REPEAT7;Parent=SEQF8156.1|JAKREN010000024.1_2;Note=AATCGATAATAGCCCCGAGAAAGAGAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	binding_site	9112	9155	44	+	.	ID=SEQF8156.1|JAKREN010000024.1_2_SPACER7;Parent=SEQF8156.1|JAKREN010000024.1_2;Note=ACGAGAACTCGTTTTGTCTTTCAACTAAGAAAACGTTTTAAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	direct_repeat	9156	9183	28	+	.	ID=SEQF8156.1|JAKREN010000024.1_2_REPEAT8;Parent=SEQF8156.1|JAKREN010000024.1_2;Note=AATCGATAATGGCCCCGAAAAGAGGGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8156.1|JAKREN010000024.1	CCTyper	OPERON	74	8529	8456	+	.	ID=SEQF8156.1|JAKREN010000024.1@1;Genome_ID=SEQF8156.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=20.0;Genes=Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_0_I-II-III,Cas10_1_CAS-III,Csm2gr11_0_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm5gr7_0_CAS-III-A-III-D,Csm6_0_IIIA,Cas6_0_CAS-I-II-III-IV-V-VI;Positions=2,3,4,5,6,7,8,10,11;E-values=2.40e-80,2.70e-22,1.20e-204,7.70e-24,9.30e-82,2.10e-48,1.80e-26,7.00e-107,9.00e-23;CoverageSeq=0.894,0.971,0.844,0.676,0.953,0.983,0.755,0.84,0.803;CoverageHMM=0.884,0.99,0.998,1.0,0.991,0.968,0.518,0.989,0.99;Strand_Interference=1;Strand_Adaptation=NA
SEQF8156.1|JAKREN010000024.1	CCTyper	CDS	1214	3487	758	+	.	ID=SEQF8156.1|JAKREN010000024.1_4_cas;Genome_ID=SEQF8156.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=1.2e-204;Score=678.6;Coverage_Seq=0.8443271767810027;Coverage_Hmm=0.9984709480122325
SEQF8156.1|JAKREN010000024.1	CCTyper	CDS	74	895	274	+	.	ID=SEQF8156.1|JAKREN010000024.1_2_cas;Genome_ID=SEQF8156.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.4000000000000003e-80;Score=266.6;Coverage_Seq=0.8941605839416058;Coverage_Hmm=0.8836363636363637
SEQF8156.1|JAKREN010000024.1	CCTyper	CDS	895	1200	102	+	.	ID=SEQF8156.1|JAKREN010000024.1_3_cas;Genome_ID=SEQF8156.1;Feature_type=CDS;Product=Cas Prediction : Cas2_0_I-II-III;coding_strand=+;E-value=2.7e-22;Score=75.9;Coverage_Seq=0.9705882352941176;Coverage_Hmm=0.9895833333333334
SEQF8156.1|JAKREN010000024.1	CCTyper	CDS	7783	8529	249	+	.	ID=SEQF8156.1|JAKREN010000024.1_11_cas;Genome_ID=SEQF8156.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=9.000000000000001e-23;Score=78.7;Coverage_Seq=0.8032128514056225;Coverage_Hmm=0.9896907216494846
SEQF8156.1|JAKREN010000024.1	CCTyper	CDS	3490	3915	142	+	.	ID=SEQF8156.1|JAKREN010000024.1_5_cas;Genome_ID=SEQF8156.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_0_CAS-III-A;coding_strand=+;E-value=7.7e-24;Score=81.5;Coverage_Seq=0.676056338028169;Coverage_Hmm=1.0
SEQF8156.1|JAKREN010000024.1	CCTyper	CDS	3917	4561	215	+	.	ID=SEQF8156.1|JAKREN010000024.1_6_cas;Genome_ID=SEQF8156.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=9.299999999999999e-82;Score=271.0;Coverage_Seq=0.9534883720930233;Coverage_Hmm=0.9906976744186047
SEQF8156.1|JAKREN010000024.1	CCTyper	CDS	4572	5480	303	+	.	ID=SEQF8156.1|JAKREN010000024.1_7_cas;Genome_ID=SEQF8156.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=+;E-value=2.1000000000000002e-48;Score=162.2;Coverage_Seq=0.9834983498349835;Coverage_Hmm=0.9682539682539683
SEQF8156.1|JAKREN010000024.1	CCTyper	CDS	5484	6278	265	+	.	ID=SEQF8156.1|JAKREN010000024.1_8_cas;Genome_ID=SEQF8156.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=+;E-value=1.8e-26;Score=90.3;Coverage_Seq=0.7547169811320755;Coverage_Hmm=0.5178082191780822
SEQF8156.1|JAKREN010000024.1	CCTyper	CDS	6516	7790	425	+	.	ID=SEQF8156.1|JAKREN010000024.1_10_cas;Genome_ID=SEQF8156.1;Feature_type=CDS;Product=Cas Prediction : Csm6_0_IIIA;coding_strand=+;E-value=7e-107;Score=354.5;Coverage_Seq=0.84;Coverage_Hmm=0.988950276243094