SEQF8176.1|CP024067.1	CCTyper	repeat_region	1459217	1460058	842	+	.	ID=SEQF8176.1|CP024067.1_1;Genome_ID=SEQF8176.1;Note=Predictor:CCtyper;Start:1459217;End:1460058;Consensus_Repeat:AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Number_of_Repeats:12;Repeat_Length:36;Average_Spacer_Length:37.3;Repeat_Identity:92.1;Spacer_Identity:44.0;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.915;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	direct_repeat	1459217	1459252	36	+	.	ID=SEQF8176.1|CP024067.1_1_REPEAT1;Parent=SEQF8176.1|CP024067.1_1;Note=AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	binding_site	1459253	1459288	36	+	.	ID=SEQF8176.1|CP024067.1_1_SPACER1;Parent=SEQF8176.1|CP024067.1_1;Note=CTGCTTAAACGTTTACTTAGCTGGATCGTCTGGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	direct_repeat	1459289	1459324	36	+	.	ID=SEQF8176.1|CP024067.1_1_REPEAT2;Parent=SEQF8176.1|CP024067.1_1;Note=AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	binding_site	1459325	1459359	35	+	.	ID=SEQF8176.1|CP024067.1_1_SPACER2;Parent=SEQF8176.1|CP024067.1_1;Note=TCAGTTACCTTGACAATGTCGCAACCATCTGATGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	direct_repeat	1459360	1459395	36	+	.	ID=SEQF8176.1|CP024067.1_1_REPEAT3;Parent=SEQF8176.1|CP024067.1_1;Note=AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	binding_site	1459396	1459433	38	+	.	ID=SEQF8176.1|CP024067.1_1_SPACER3;Parent=SEQF8176.1|CP024067.1_1;Note=AAAGTTGATTGTAGACCTTGTGCGATAATTTCATCGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	direct_repeat	1459434	1459469	36	+	.	ID=SEQF8176.1|CP024067.1_1_REPEAT4;Parent=SEQF8176.1|CP024067.1_1;Note=AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	binding_site	1459470	1459507	38	+	.	ID=SEQF8176.1|CP024067.1_1_SPACER4;Parent=SEQF8176.1|CP024067.1_1;Note=CATAATCACCGCCTAATTCATATCTTTCTTTTTCTTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	direct_repeat	1459508	1459543	36	+	.	ID=SEQF8176.1|CP024067.1_1_REPEAT5;Parent=SEQF8176.1|CP024067.1_1;Note=AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	binding_site	1459544	1459581	38	+	.	ID=SEQF8176.1|CP024067.1_1_SPACER5;Parent=SEQF8176.1|CP024067.1_1;Note=TCTTTCATCTAGTGATAATTCCATGTAGTCTATCATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	direct_repeat	1459582	1459617	36	+	.	ID=SEQF8176.1|CP024067.1_1_REPEAT6;Parent=SEQF8176.1|CP024067.1_1;Note=AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	binding_site	1459618	1459655	38	+	.	ID=SEQF8176.1|CP024067.1_1_SPACER6;Parent=SEQF8176.1|CP024067.1_1;Note=TCAAGCGCTTCGGACGATGTTATTTTTTTGAGTTGTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	direct_repeat	1459656	1459691	36	+	.	ID=SEQF8176.1|CP024067.1_1_REPEAT7;Parent=SEQF8176.1|CP024067.1_1;Note=AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	binding_site	1459692	1459728	37	+	.	ID=SEQF8176.1|CP024067.1_1_SPACER7;Parent=SEQF8176.1|CP024067.1_1;Note=TTGCAATTCTTCCAACGAACCAGCAAAGTGCATAACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	direct_repeat	1459729	1459764	36	+	.	ID=SEQF8176.1|CP024067.1_1_REPEAT8;Parent=SEQF8176.1|CP024067.1_1;Note=AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	binding_site	1459765	1459802	38	+	.	ID=SEQF8176.1|CP024067.1_1_SPACER8;Parent=SEQF8176.1|CP024067.1_1;Note=AATAGTTAATGTTTTCATTGCAACACTCCTTTATTCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	direct_repeat	1459803	1459838	36	+	.	ID=SEQF8176.1|CP024067.1_1_REPEAT9;Parent=SEQF8176.1|CP024067.1_1;Note=GATAAGAACATATCTCCGAATAAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	binding_site	1459839	1459879	41	+	.	ID=SEQF8176.1|CP024067.1_1_SPACER9;Parent=SEQF8176.1|CP024067.1_1;Note=TCTTCGTGTCGTGTGATTGCATTGTATTTATAACCATCAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	direct_repeat	1459880	1459915	36	+	.	ID=SEQF8176.1|CP024067.1_1_REPEAT10;Parent=SEQF8176.1|CP024067.1_1;Note=AGTAAGAACATATCTCCGAATAAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	binding_site	1459916	1459951	36	+	.	ID=SEQF8176.1|CP024067.1_1_SPACER10;Parent=SEQF8176.1|CP024067.1_1;Note=TGATTAGCACCCTCCATACTGTCTATGTTGTCATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	direct_repeat	1459952	1459987	36	+	.	ID=SEQF8176.1|CP024067.1_1_REPEAT11;Parent=SEQF8176.1|CP024067.1_1;Note=AGTAAGAACATATCTCCGAATAAAGGAGACGAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	binding_site	1459988	1460022	35	+	.	ID=SEQF8176.1|CP024067.1_1_SPACER11;Parent=SEQF8176.1|CP024067.1_1;Note=TTTTTTGTTATGCAAATATTTCTTCTTTTTGTGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	direct_repeat	1460023	1460058	36	+	.	ID=SEQF8176.1|CP024067.1_1_REPEAT12;Parent=SEQF8176.1|CP024067.1_1;Note=AGTAAGAACATATCTCCGAATAAAGGAGACTGAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8176.1|CP024067.1	CCTyper	OPERON	1451705	1465344	13640	+	.	ID=SEQF8176.1|CP024067.1@38;Genome_ID=SEQF8176.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=18.0;Genes=Cas6_0_CAS-I-II-III-IV-V-VI,Cas10_1_CAS-III,Csm2gr11_7_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm5gr7_0_CAS-III-A-III-D,Cas1_0_II,Cas2_0_CAS-I-II-III-IV-V-VI,Csm6_1_CAS-III,TPR_0_CAS-III-B,RecD_0_IVD;Positions=1343,1344,1345,1346,1347,1348,1349,1350,1352,1354,1355;E-values=4.40e-24,2.30e-178,1.10e-21,1.30e-79,1.00e-34,1.10e-25,3.50e-85,1.40e-21,2.50e-63,3.60e-06,3.00e-76;CoverageSeq=0.763,0.829,0.752,0.932,0.964,0.804,0.917,0.873,0.826,0.883,0.855;CoverageHMM=0.871,0.998,0.973,0.981,0.971,0.715,0.993,0.944,0.944,0.432,0.937;Strand_Interference=1;Strand_Adaptation=NA
SEQF8176.1|CP024067.1	CCTyper	CDS	1452460	1454754	765	+	.	ID=SEQF8176.1|CP024067.1_1344_cas;Genome_ID=SEQF8176.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=2.3e-178;Score=591.7;Coverage_Seq=0.8287581699346406;Coverage_Hmm=0.9984709480122325
SEQF8176.1|CP024067.1	CCTyper	CDS	1457852	1458760	303	+	.	ID=SEQF8176.1|CP024067.1_1349_cas;Genome_ID=SEQF8176.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_II;coding_strand=+;E-value=3.5e-85;Score=282.5;Coverage_Seq=0.9174917491749175;Coverage_Hmm=0.9928057553956835
SEQF8176.1|CP024067.1	CCTyper	CDS	1458763	1459068	102	+	.	ID=SEQF8176.1|CP024067.1_1350_cas;Genome_ID=SEQF8176.1;Feature_type=CDS;Product=Cas Prediction : Cas2_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.4e-21;Score=73.6;Coverage_Seq=0.8725490196078431;Coverage_Hmm=0.9444444444444444
SEQF8176.1|CP024067.1	CCTyper	CDS	1451705	1452439	245	+	.	ID=SEQF8176.1|CP024067.1_1343_cas;Genome_ID=SEQF8176.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=4.399999999999999e-24;Score=82.8;Coverage_Seq=0.763265306122449;Coverage_Hmm=0.8711340206185567
SEQF8176.1|CP024067.1	CCTyper	CDS	1454756	1455238	161	+	.	ID=SEQF8176.1|CP024067.1_1345_cas;Genome_ID=SEQF8176.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=+;E-value=1.1e-21;Score=74.7;Coverage_Seq=0.7515527950310559;Coverage_Hmm=0.9727272727272728
SEQF8176.1|CP024067.1	CCTyper	CDS	1455258	1455923	222	+	.	ID=SEQF8176.1|CP024067.1_1346_cas;Genome_ID=SEQF8176.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=1.3e-79;Score=263.8;Coverage_Seq=0.9324324324324325;Coverage_Hmm=0.9813953488372092
SEQF8176.1|CP024067.1	CCTyper	CDS	1455927	1456844	306	+	.	ID=SEQF8176.1|CP024067.1_1347_cas;Genome_ID=SEQF8176.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=+;E-value=1.0000000000000001e-34;Score=117.1;Coverage_Seq=0.9640522875816994;Coverage_Hmm=0.9714285714285714
SEQF8176.1|CP024067.1	CCTyper	CDS	1456847	1457827	327	+	.	ID=SEQF8176.1|CP024067.1_1348_cas;Genome_ID=SEQF8176.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=+;E-value=1.0999999999999999e-25;Score=87.5;Coverage_Seq=0.8042813455657493;Coverage_Hmm=0.7150684931506849
SEQF8176.1|CP024067.1	CCTyper	CDS	1460144	1461382	413	+	.	ID=SEQF8176.1|CP024067.1_1352_cas;Genome_ID=SEQF8176.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=2.5e-63;Score=211.0;Coverage_Seq=0.8256658595641646;Coverage_Hmm=0.9444444444444444
SEQF8176.1|CP024067.1	CCTyper	CDS	1462870	1465344	825	+	.	ID=SEQF8176.1|CP024067.1_1355_cas;Genome_ID=SEQF8176.1;Feature_type=CDS;Product=Cas Prediction : RecD_0_IVD;coding_strand=+;E-value=2.9999999999999996e-76;Score=253.9;Coverage_Seq=0.8545454545454545;Coverage_Hmm=0.9370904325032765
SEQF8176.1|CP024067.1	CCTyper	CDS	1462209	1462877	223	+	.	ID=SEQF8176.1|CP024067.1_1354_cas;Genome_ID=SEQF8176.1;Feature_type=CDS;Product=Cas Prediction : TPR_0_CAS-III-B;coding_strand=+;E-value=3.6e-06;Score=22.8;Coverage_Seq=0.8834080717488789;Coverage_Hmm=0.4323770491803279