SEQF8181.1|VSVU01000004.1	CCTyper	repeat_region	85958	87445	1488	+	.	ID=SEQF8181.1|VSVU01000004.1_1;Genome_ID=SEQF8181.1;Note=Predictor:CCtyper;Start:85958;End:87445;Consensus_Repeat:GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Number_of_Repeats:23;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:93.3;Spacer_Identity:43.0;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.914;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	85958	85993	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT1;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAATCTTATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	85994	86023	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER1;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GAGCATTGAGACACCAACTGAACGCAGATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	86024	86059	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT2;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GAGCCTAACCTTATTAATTTAACATACTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	86060	86089	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER2;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GTATTGTCATAGGGCTTTTCGTGTGAACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	86090	86125	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT3;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	86126	86155	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER3;Parent=SEQF8181.1|VSVU01000004.1_1;Note=CGCCAACATCACGTATGAAGTAAATGGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	86156	86191	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT4;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	86192	86221	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER4;Parent=SEQF8181.1|VSVU01000004.1_1;Note=ATCAAGTTAGTAATTTCTGCAATCTTATCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	86222	86257	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT5;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	86258	86287	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER5;Parent=SEQF8181.1|VSVU01000004.1_1;Note=TTGATGGCTGCATCTATTGCGTTTTGAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	86288	86323	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT6;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	86324	86353	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER6;Parent=SEQF8181.1|VSVU01000004.1_1;Note=ATGTTTACTCGAATTTGGCCAGCACTGCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	86354	86389	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT7;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	86390	86419	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER7;Parent=SEQF8181.1|VSVU01000004.1_1;Note=CCGTCTGTCTTGTAATCAACAACTACCTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	86420	86455	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT8;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	86456	86485	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER8;Parent=SEQF8181.1|VSVU01000004.1_1;Note=TGATTAGTCACACCATAAATAACTTTCCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	86486	86521	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT9;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	86522	86551	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER9;Parent=SEQF8181.1|VSVU01000004.1_1;Note=TGTAAATACAGTTTTAACTATTGGCGGTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	86552	86587	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT10;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	86588	86617	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER10;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GATGGCTTAAGTGAAATGATTATTGGTGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	86618	86653	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT11;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	86654	86683	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER11;Parent=SEQF8181.1|VSVU01000004.1_1;Note=AAAAAGATTAAAGAAAATTTCGACAAATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	86684	86719	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT12;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	86720	86749	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER12;Parent=SEQF8181.1|VSVU01000004.1_1;Note=ATTGCTTGCTGTGCAATATCCATATTTATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	86750	86785	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT13;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	86786	86815	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER13;Parent=SEQF8181.1|VSVU01000004.1_1;Note=ACGCTCGCAACTGCTTCTTGAACTTTGCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	86816	86851	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT14;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	86852	86881	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER14;Parent=SEQF8181.1|VSVU01000004.1_1;Note=AGCTTTACTGGGTGCATGCACTGAATAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	86882	86917	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT15;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	86918	86947	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER15;Parent=SEQF8181.1|VSVU01000004.1_1;Note=CGTGCCTTGTGTAGCTTTAACGATAACTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	86948	86983	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT16;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	86984	87013	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER16;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GCCTTAATCAGTGAACTAACTTGTGCTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	87014	87049	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT17;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	87050	87079	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER17;Parent=SEQF8181.1|VSVU01000004.1_1;Note=TTATAGCGAACATATAATCCATTCTTAGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	87080	87115	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT18;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	87116	87145	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER18;Parent=SEQF8181.1|VSVU01000004.1_1;Note=TTGGTAGTTTTTTACGTTTCATAGCCATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	87146	87181	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT19;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	87182	87211	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER19;Parent=SEQF8181.1|VSVU01000004.1_1;Note=TTGTGAGTTCACCACCTTTCAATTGTAAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	87212	87247	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT20;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	87248	87277	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER20;Parent=SEQF8181.1|VSVU01000004.1_1;Note=TTGTCAGGCAGCTACCTGACAATTTAGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	87278	87313	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT21;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	87314	87343	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER21;Parent=SEQF8181.1|VSVU01000004.1_1;Note=CTATTGATATAGGCACTTTTGACTACATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	87344	87379	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT22;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	binding_site	87380	87409	30	+	.	ID=SEQF8181.1|VSVU01000004.1_1_SPACER22;Parent=SEQF8181.1|VSVU01000004.1_1;Note=CTTCCAGGTTGCTAGTTGATGGAATTATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	direct_repeat	87410	87445	36	+	.	ID=SEQF8181.1|VSVU01000004.1_1_REPEAT23;Parent=SEQF8181.1|VSVU01000004.1_1;Note=GGTCTTAACCTAATTGATTTAACATCCTTCTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8181.1|VSVU01000004.1	CCTyper	OPERON	85296	93546	8251	-	.	ID=SEQF8181.1|VSVU01000004.1@4;Genome_ID=SEQF8181.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csa3_1_CAS-I-II-III-IV-V-VI,Csn2_3_CAS-II-A,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II;Positions=82,84,85,86,87;E-values=6.10e-05,2.30e-79,1.10e-55,1.00e-95,3.60e-168;CoverageSeq=0.476,0.987,0.99,0.889,0.801;CoverageHMM=0.407,1.0,1.0,0.982,0.976;Strand_Interference=-1;Strand_Adaptation=-1
SEQF8181.1|VSVU01000004.1	CCTyper	CDS	88428	89318	297	-	.	ID=SEQF8181.1|VSVU01000004.1_86_cas;Genome_ID=SEQF8181.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1e-95;Score=316.8;Coverage_Seq=0.8888888888888888;Coverage_Hmm=0.9818181818181818
SEQF8181.1|VSVU01000004.1	CCTyper	CDS	88145	88450	102	-	.	ID=SEQF8181.1|VSVU01000004.1_85_cas;Genome_ID=SEQF8181.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.1e-55;Score=182.9;Coverage_Seq=0.9901960784313726;Coverage_Hmm=1.0
SEQF8181.1|VSVU01000004.1	CCTyper	CDS	89530	93546	1339	-	.	ID=SEQF8181.1|VSVU01000004.1_87_cas;Genome_ID=SEQF8181.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=3.6000000000000004e-168;Score=558.2;Coverage_Seq=0.8005974607916355;Coverage_Hmm=0.9759036144578314
SEQF8181.1|VSVU01000004.1	CCTyper	CDS	85296	85604	103	-	.	ID=SEQF8181.1|VSVU01000004.1_82_cas;Genome_ID=SEQF8181.1;Feature_type=CDS;Product=Cas Prediction : Csa3_1_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.1e-05;Score=20.1;Coverage_Seq=0.47572815533980584;Coverage_Hmm=0.4067796610169492
SEQF8181.1|VSVU01000004.1	CCTyper	CDS	87477	88148	224	-	.	ID=SEQF8181.1|VSVU01000004.1_84_cas;Genome_ID=SEQF8181.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=-;E-value=2.3e-79;Score=262.8;Coverage_Seq=0.9866071428571429;Coverage_Hmm=1.0