SEQF8191.1|JADCKI010000004.1	CCTyper	repeat_region	15803	16279	477	+	.	ID=SEQF8191.1|JADCKI010000004.1_1;Genome_ID=SEQF8191.1;Note=Predictor:CCtyper;Start:15803;End:16279;Consensus_Repeat:AGTTTTCGTCTCCTTTATTCGGAGATATGTTCTTACT;Number_of_Repeats:7;Repeat_Length:37;Average_Spacer_Length:36.3;Repeat_Identity:92.8;Spacer_Identity:45.4;Spacer_Length_Sem:0.6;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.921;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8191.1|JADCKI010000004.1	CCTyper	direct_repeat	15803	15839	37	+	.	ID=SEQF8191.1|JADCKI010000004.1_1_REPEAT1;Parent=SEQF8191.1|JADCKI010000004.1_1;Note=AGATTCAGTCTCCTATATTCGGAGATATGTTCTTACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8191.1|JADCKI010000004.1	CCTyper	binding_site	15840	15875	36	+	.	ID=SEQF8191.1|JADCKI010000004.1_1_SPACER1;Parent=SEQF8191.1|JADCKI010000004.1_1;Note=AGCAAGCTAAGTTAGCAGAATGGTCATGCAAAATGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8191.1|JADCKI010000004.1	CCTyper	direct_repeat	15876	15912	37	+	.	ID=SEQF8191.1|JADCKI010000004.1_1_REPEAT2;Parent=SEQF8191.1|JADCKI010000004.1_1;Note=AGTTTTCGTCTCCTTTATTCGGAGATATGTTCTTACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8191.1|JADCKI010000004.1	CCTyper	binding_site	15913	15948	36	+	.	ID=SEQF8191.1|JADCKI010000004.1_1_SPACER2;Parent=SEQF8191.1|JADCKI010000004.1_1;Note=GGAAGTGAAACAAGATGGGACTAAGGCAGATGTATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8191.1|JADCKI010000004.1	CCTyper	direct_repeat	15949	15985	37	+	.	ID=SEQF8191.1|JADCKI010000004.1_1_REPEAT3;Parent=SEQF8191.1|JADCKI010000004.1_1;Note=GGTTTTCGTCTCCTTTATTCGGAGATATGTTCTTACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8191.1|JADCKI010000004.1	CCTyper	binding_site	15986	16022	37	+	.	ID=SEQF8191.1|JADCKI010000004.1_1_SPACER3;Parent=SEQF8191.1|JADCKI010000004.1_1;Note=TGATTGAACGTGAGTTGAGCGATATTTTCAACAACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8191.1|JADCKI010000004.1	CCTyper	direct_repeat	16023	16059	37	+	.	ID=SEQF8191.1|JADCKI010000004.1_1_REPEAT4;Parent=SEQF8191.1|JADCKI010000004.1_1;Note=AGTTTTCGTCTCCTTTATTCGGGGATATGTTCTTACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8191.1|JADCKI010000004.1	CCTyper	binding_site	16060	16094	35	+	.	ID=SEQF8191.1|JADCKI010000004.1_1_SPACER4;Parent=SEQF8191.1|JADCKI010000004.1_1;Note=ACAGGTTCGGTTAAAGATAAGGAGGAATTGAAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8191.1|JADCKI010000004.1	CCTyper	direct_repeat	16095	16131	37	+	.	ID=SEQF8191.1|JADCKI010000004.1_1_REPEAT5;Parent=SEQF8191.1|JADCKI010000004.1_1;Note=AGTTTTCGTCTCCTTTATTCGGAGATATGTTCTTACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8191.1|JADCKI010000004.1	CCTyper	binding_site	16132	16166	35	+	.	ID=SEQF8191.1|JADCKI010000004.1_1_SPACER5;Parent=SEQF8191.1|JADCKI010000004.1_1;Note=AGTTTGCAAAAATAAAGAATTTCATTATCAATTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8191.1|JADCKI010000004.1	CCTyper	direct_repeat	16167	16203	37	+	.	ID=SEQF8191.1|JADCKI010000004.1_1_REPEAT6;Parent=SEQF8191.1|JADCKI010000004.1_1;Note=AGTTTTCGTCTCCTTTATTCGGAGATATGTTCTTACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8191.1|JADCKI010000004.1	CCTyper	binding_site	16204	16242	39	+	.	ID=SEQF8191.1|JADCKI010000004.1_1_SPACER6;Parent=SEQF8191.1|JADCKI010000004.1_1;Note=ACTCAGTAAGTGAAGGGCTTGTTGTAAGTGGTAGCTATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8191.1|JADCKI010000004.1	CCTyper	direct_repeat	16243	16279	37	+	.	ID=SEQF8191.1|JADCKI010000004.1_1_REPEAT7;Parent=SEQF8191.1|JADCKI010000004.1_1;Note=AGTTTTCGTCTCCTTTATTCGGAGATATGTTCTTACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8191.1|JADCKI010000041.1	CCTyper	OPERON	3609	4910	1302	+	.	ID=SEQF8191.1|JADCKI010000041.1@1;Genome_ID=SEQF8191.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-D;Complete_Interference=100%;Complete_Adaptation=0%;Best_type=II-D;Best_score=4.0;Genes=Cas9_0_II-D;Positions=6;E-values=5.90e-24;CoverageSeq=0.571;CoverageHMM=0.23;Strand_Interference=1;Strand_Adaptation=NA
SEQF8191.1|JADCKI010000004.1	CCTyper	OPERON	10519	23709	13191	-	.	ID=SEQF8191.1|JADCKI010000004.1@1;Genome_ID=SEQF8191.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=18.0;Genes=RecD_0_IVD,TPR_0_CAS-III-B,Csm6_1_CAS-III,Cas2_0_I-II-III,Cas1_0_II,Csm5gr7_0_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_7_CAS-III-A,Cas10_1_CAS-III,Cas6_0_CAS-I-II-III-IV-V-VI;Positions=13,14,16,17,18,19,20,21,22,23,24;E-values=1.30e-76,6.00e-06,8.70e-64,1.50e-22,7.30e-52,2.60e-26,9.20e-35,5.90e-79,9.50e-22,9.50e-181,1.40e-24;CoverageSeq=0.853,0.883,0.826,0.892,0.872,0.802,0.801,0.919,0.741,0.829,0.858;CoverageHMM=0.936,0.432,0.944,0.927,0.655,0.715,0.73,0.967,0.964,0.998,0.876;Strand_Interference=-1;Strand_Adaptation=NA
SEQF8191.1|JADCKI010000004.1	CCTyper	CDS	20729	23032	768	-	.	ID=SEQF8191.1|JADCKI010000004.1_23_cas;Genome_ID=SEQF8191.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=-;E-value=9.499999999999999e-181;Score=599.6;Coverage_Seq=0.8294270833333334;Coverage_Hmm=0.9984709480122325
SEQF8191.1|JADCKI010000004.1	CCTyper	CDS	17003	17635	211	-	.	ID=SEQF8191.1|JADCKI010000004.1_18_cas;Genome_ID=SEQF8191.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_II;coding_strand=-;E-value=7.3e-52;Score=173.3;Coverage_Seq=0.8720379146919431;Coverage_Hmm=0.6546762589928058
SEQF8191.1|JADCKI010000004.1	CCTyper	CDS	16418	16723	102	-	.	ID=SEQF8191.1|JADCKI010000004.1_17_cas;Genome_ID=SEQF8191.1;Feature_type=CDS;Product=Cas Prediction : Cas2_0_I-II-III;coding_strand=-;E-value=1.5000000000000002e-22;Score=76.7;Coverage_Seq=0.8921568627450981;Coverage_Hmm=0.9270833333333334
SEQF8191.1|JADCKI010000004.1	CCTyper	CDS	23053	23709	219	-	.	ID=SEQF8191.1|JADCKI010000004.1_24_cas;Genome_ID=SEQF8191.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.3999999999999999e-24;Score=84.6;Coverage_Seq=0.8584474885844748;Coverage_Hmm=0.8762886597938144
SEQF8191.1|JADCKI010000041.1	CCTyper	CDS	3609	4910	434	+	.	ID=SEQF8191.1|JADCKI010000041.1_6_cas;Genome_ID=SEQF8191.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II-D;coding_strand=+;E-value=5.8999999999999995e-24;Score=81.5;Coverage_Seq=0.5714285714285714;Coverage_Hmm=0.22977725674091443
SEQF8191.1|JADCKI010000004.1	CCTyper	CDS	20254	20727	158	-	.	ID=SEQF8191.1|JADCKI010000004.1_22_cas;Genome_ID=SEQF8191.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=-;E-value=9.500000000000001e-22;Score=75.1;Coverage_Seq=0.740506329113924;Coverage_Hmm=0.9636363636363636
SEQF8191.1|JADCKI010000004.1	CCTyper	CDS	19564	20229	222	-	.	ID=SEQF8191.1|JADCKI010000004.1_21_cas;Genome_ID=SEQF8191.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=5.9e-79;Score=261.8;Coverage_Seq=0.918918918918919;Coverage_Hmm=0.9674418604651163
SEQF8191.1|JADCKI010000004.1	CCTyper	CDS	18643	19560	306	-	.	ID=SEQF8191.1|JADCKI010000004.1_20_cas;Genome_ID=SEQF8191.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=9.2e-35;Score=117.3;Coverage_Seq=0.8006535947712419;Coverage_Hmm=0.7301587301587301
SEQF8191.1|JADCKI010000004.1	CCTyper	CDS	17660	18643	328	-	.	ID=SEQF8191.1|JADCKI010000004.1_19_cas;Genome_ID=SEQF8191.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=-;E-value=2.6e-26;Score=89.7;Coverage_Seq=0.801829268292683;Coverage_Hmm=0.7150684931506849
SEQF8191.1|JADCKI010000004.1	CCTyper	CDS	14480	15718	413	-	.	ID=SEQF8191.1|JADCKI010000004.1_16_cas;Genome_ID=SEQF8191.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=-;E-value=8.7e-64;Score=212.6;Coverage_Seq=0.8256658595641646;Coverage_Hmm=0.9444444444444444
SEQF8191.1|JADCKI010000004.1	CCTyper	CDS	10519	12993	825	-	.	ID=SEQF8191.1|JADCKI010000004.1_13_cas;Genome_ID=SEQF8191.1;Feature_type=CDS;Product=Cas Prediction : RecD_0_IVD;coding_strand=-;E-value=1.3e-76;Score=255.2;Coverage_Seq=0.8533333333333334;Coverage_Hmm=0.9357798165137615
SEQF8191.1|JADCKI010000004.1	CCTyper	CDS	12986	13654	223	-	.	ID=SEQF8191.1|JADCKI010000004.1_14_cas;Genome_ID=SEQF8191.1;Feature_type=CDS;Product=Cas Prediction : TPR_0_CAS-III-B;coding_strand=-;E-value=6e-06;Score=22.2;Coverage_Seq=0.8834080717488789;Coverage_Hmm=0.4323770491803279