SEQF8405.1|CM002133.1	CCTyper	repeat_region	759460	759733	274	+	.	ID=SEQF8405.1|CM002133.1_1;Genome_ID=SEQF8405.1;Note=Predictor:CCtyper;Start:759460;End:759733;Consensus_Repeat:GGGATCACCCCCGCGTGTGCGGGAAAAAC;Number_of_Repeats:5;Repeat_Length:29.0;Average_Spacer_Length:32.2;Repeat_Identity:82.7;Spacer_Identity:40.8;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.985;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	direct_repeat	759460	759488	29	+	.	ID=SEQF8405.1|CM002133.1_1_REPEAT1;Parent=SEQF8405.1|CM002133.1_1;Note=NNNNNNNNTCCCGCGTGTGCGGGAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	binding_site	759489	759520	32	+	.	ID=SEQF8405.1|CM002133.1_1_SPACER1;Parent=SEQF8405.1|CM002133.1_1;Note=GCCTTGCAAACCTTGAGGACCTTGTGCCCCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	direct_repeat	759521	759549	29	+	.	ID=SEQF8405.1|CM002133.1_1_REPEAT2;Parent=SEQF8405.1|CM002133.1_1;Note=GGGATCACCCCCGCGTGTGCGGGAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	binding_site	759550	759581	32	+	.	ID=SEQF8405.1|CM002133.1_1_SPACER2;Parent=SEQF8405.1|CM002133.1_1;Note=TCAGAGGTCAAGCGACTAATAAGAATGTAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	direct_repeat	759582	759610	29	+	.	ID=SEQF8405.1|CM002133.1_1_REPEAT3;Parent=SEQF8405.1|CM002133.1_1;Note=GGGATCACCCCCGCGTGTGCGGGAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	binding_site	759611	759642	32	+	.	ID=SEQF8405.1|CM002133.1_1_SPACER3;Parent=SEQF8405.1|CM002133.1_1;Note=CATAAGTTCCAAACTTGCTAAATCGTGGTCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	direct_repeat	759643	759671	29	+	.	ID=SEQF8405.1|CM002133.1_1_REPEAT4;Parent=SEQF8405.1|CM002133.1_1;Note=GGGATCACCCCCGCGTGTGCGGGAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	binding_site	759672	759704	33	+	.	ID=SEQF8405.1|CM002133.1_1_SPACER4;Parent=SEQF8405.1|CM002133.1_1;Note=TCGAATCTATCGGAAAAGGCAGCGGGGACTATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	direct_repeat	759705	759733	29	+	.	ID=SEQF8405.1|CM002133.1_1_REPEAT5;Parent=SEQF8405.1|CM002133.1_1;Note=GGGATCACCCCCGCGTGTGCGGGAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	repeat_region	1872157	1872457	301	+	.	ID=SEQF8405.1|CM002133.1_2;Genome_ID=SEQF8405.1;Note=Predictor:CCtyper;Start:1872157;End:1872457;Consensus_Repeat:TGTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Number_of_Repeats:5;Repeat_Length:37.0;Average_Spacer_Length:29.0;Repeat_Identity:97.9;Spacer_Identity:43.8;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.947;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	direct_repeat	1872157	1872193	37	+	.	ID=SEQF8405.1|CM002133.1_2_REPEAT1;Parent=SEQF8405.1|CM002133.1_2;Note=TGTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	binding_site	1872194	1872222	29	+	.	ID=SEQF8405.1|CM002133.1_2_SPACER1;Parent=SEQF8405.1|CM002133.1_2;Note=AAGTCCCTGGCATTATCTAATACGAAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	direct_repeat	1872223	1872259	37	+	.	ID=SEQF8405.1|CM002133.1_2_REPEAT2;Parent=SEQF8405.1|CM002133.1_2;Note=TGTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	binding_site	1872260	1872288	29	+	.	ID=SEQF8405.1|CM002133.1_2_SPACER2;Parent=SEQF8405.1|CM002133.1_2;Note=GTAATAATAGATTGTTGTACGCTCATATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	direct_repeat	1872289	1872325	37	+	.	ID=SEQF8405.1|CM002133.1_2_REPEAT3;Parent=SEQF8405.1|CM002133.1_2;Note=AGTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	binding_site	1872326	1872354	29	+	.	ID=SEQF8405.1|CM002133.1_2_SPACER3;Parent=SEQF8405.1|CM002133.1_2;Note=GCATTAGTACCAACGTTTTCAACTGGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	direct_repeat	1872355	1872391	37	+	.	ID=SEQF8405.1|CM002133.1_2_REPEAT4;Parent=SEQF8405.1|CM002133.1_2;Note=TGTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	binding_site	1872392	1872420	29	+	.	ID=SEQF8405.1|CM002133.1_2_SPACER4;Parent=SEQF8405.1|CM002133.1_2;Note=AAAGGTTGCTCGACTTCAGTCTCTTCGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	direct_repeat	1872421	1872457	37	+	.	ID=SEQF8405.1|CM002133.1_2_REPEAT5;Parent=SEQF8405.1|CM002133.1_2;Note=TGTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	repeat_region	1870423	1870590	168	+	.	ID=SEQF8405.1|CM002133.1-23_3;Genome_ID=SEQF8405.1;Note=Predictor:CCtyper;Start:1870423;End:1870590;Consensus_Repeat:TTTTGAAACCATTCGAAACAATACAGCTCTAAAAC;Number_of_Repeats:3;Repeat_Length:36.7;Average_Spacer_Length:29.0;Repeat_Identity:88.2;Spacer_Identity:41.5;Spacer_Length_Sem:1.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.977;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	direct_repeat	1870423	1870457	35	+	.	ID=SEQF8405.1|CM002133.1-23_3_REPEAT1;Parent=SEQF8405.1|CM002133.1-23_3;Note=TTTTGAAACCATTCGAAACAATACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	binding_site	1870458	1870487	30	+	.	ID=SEQF8405.1|CM002133.1-23_3_SPACER1;Parent=SEQF8405.1|CM002133.1-23_3;Note=TTTTGAACAGAGTTACCATAAGTCAACTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	direct_repeat	1870488	1870524	37	+	.	ID=SEQF8405.1|CM002133.1-23_3_REPEAT2;Parent=SEQF8405.1|CM002133.1-23_3;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	binding_site	1870525	1870552	28	+	.	ID=SEQF8405.1|CM002133.1-23_3_SPACER2;Parent=SEQF8405.1|CM002133.1-23_3;Note=AGTCCCTGGCATTATCTAATACGAAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	direct_repeat	1870553	1870590	38	+	.	ID=SEQF8405.1|CM002133.1-23_3_REPEAT3;Parent=SEQF8405.1|CM002133.1-23_3;Note=TGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	repeat_region	756879	757029	151	+	.	ID=SEQF8405.1|CM002133.1-10_5;Genome_ID=SEQF8405.1;Note=Predictor:CCtyper;Start:756879;End:757029;Consensus_Repeat:AGGATCACCCCCGCGTGTGCGGGAAAAAC;Number_of_Repeats:3;Repeat_Length:29.0;Average_Spacer_Length:32.0;Repeat_Identity:95.6;Spacer_Identity:36.2;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.995;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	direct_repeat	756879	756907	29	+	.	ID=SEQF8405.1|CM002133.1-10_5_REPEAT1;Parent=SEQF8405.1|CM002133.1-10_5;Note=AGGATCACCCCCGCGTGTGCGGGAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	binding_site	756908	756939	32	+	.	ID=SEQF8405.1|CM002133.1-10_5_SPACER1;Parent=SEQF8405.1|CM002133.1-10_5;Note=GGTCTCGCAGTAGTTAGCGGTCAAGTTATGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	direct_repeat	756940	756968	29	+	.	ID=SEQF8405.1|CM002133.1-10_5_REPEAT2;Parent=SEQF8405.1|CM002133.1-10_5;Note=AGGATCACCCCCGCGAGTGCGGGAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	binding_site	756969	757000	32	+	.	ID=SEQF8405.1|CM002133.1-10_5_SPACER2;Parent=SEQF8405.1|CM002133.1-10_5;Note=AGAACTTTGGCACAGCTGAAACCTACCCAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	direct_repeat	757001	757029	29	+	.	ID=SEQF8405.1|CM002133.1-10_5_REPEAT3;Parent=SEQF8405.1|CM002133.1-10_5;Note=AGGATCACCCCCGCGTGTGCGGGAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8405.1|CM002133.1	CCTyper	OPERON	1872965	1878635	5671	-	.	ID=SEQF8405.1|CM002133.1@31;Genome_ID=SEQF8405.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II,Cas9_0_II,Cas9_1_CAS-II-C;Positions=1845,1846,1847,1848,1849,1850;E-values=4.30e-69,8.40e-48,2.10e-101,1.10e-47,4.60e-199,3.70e-82;CoverageSeq=0.943,0.955,0.928,0.959,0.833,0.757;CoverageHMM=0.683,0.922,0.996,0.186,0.669,0.602;Strand_Interference=-1;Strand_Adaptation=-1
SEQF8405.1|CM002133.1	CCTyper	OPERON	759754	769077	9324	-	.	ID=SEQF8405.1|CM002133.1@16;Genome_ID=SEQF8405.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=50%;Best_type=I-E;Best_score=26.0;Genes=DEDDh_0_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas5_0_IE,Cas7_1_CAS-I-E,Cse2gr11_5_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas8e_4_CAS-I-E,Cas3_1_CAS-I,Cas3HD_0_CAS-I,Cas3HD_0_CAS-I;Positions=790,791,792,793,794,795,796,797,799,801,802;E-values=1.40e-35,5.70e-109,4.10e-48,4.40e-43,2.40e-109,1.90e-34,3.50e-16,9.70e-92,1.20e-58,8.80e-14,2.80e-15;CoverageSeq=0.51,0.854,0.977,0.868,0.964,0.843,0.811,0.896,0.9,0.931,0.462;CoverageHMM=0.981,0.993,1.0,0.974,0.958,0.503,0.302,0.994,0.352,0.483,0.3;Strand_Interference=-1;Strand_Adaptation=-1
SEQF8405.1|CM002133.1	CCTyper	CDS	760661	761602	314	-	.	ID=SEQF8405.1|CM002133.1_791_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=5.7e-109;Score=360.6;Coverage_Seq=0.8535031847133758;Coverage_Hmm=0.9925650557620818
SEQF8405.1|CM002133.1	CCTyper	CDS	1873769	1874638	290	-	.	ID=SEQF8405.1|CM002133.1_1847_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.1e-101;Score=335.8;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF8405.1|CM002133.1	CCTyper	CDS	1873428	1873757	110	-	.	ID=SEQF8405.1|CM002133.1_1846_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.400000000000001e-48;Score=158.6;Coverage_Seq=0.9545454545454546;Coverage_Hmm=0.9224137931034483
SEQF8405.1|CM002133.1	CCTyper	CDS	768362	768664	101	-	.	ID=SEQF8405.1|CM002133.1_801_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : Cas3HD_0_CAS-I;coding_strand=-;E-value=8.8e-14;Score=48.9;Coverage_Seq=0.9306930693069307;Coverage_Hmm=0.4827586206896552
SEQF8405.1|CM002133.1	CCTyper	CDS	768604	769077	158	-	.	ID=SEQF8405.1|CM002133.1_802_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : Cas3HD_0_CAS-I;coding_strand=-;E-value=2.8e-15;Score=53.8;Coverage_Seq=0.4620253164556962;Coverage_Hmm=0.30049261083743845
SEQF8405.1|CM002133.1	CCTyper	CDS	766802	767758	319	-	.	ID=SEQF8405.1|CM002133.1_799_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=1.2e-58;Score=196.1;Coverage_Seq=0.8996865203761756;Coverage_Hmm=0.3516778523489933
SEQF8405.1|CM002133.1	CCTyper	CDS	762249	762974	242	-	.	ID=SEQF8405.1|CM002133.1_793_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IE;coding_strand=-;E-value=4.4e-43;Score=144.7;Coverage_Seq=0.8677685950413223;Coverage_Hmm=0.9739130434782609
SEQF8405.1|CM002133.1	CCTyper	CDS	761606	762244	213	-	.	ID=SEQF8405.1|CM002133.1_792_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=4.1e-48;Score=161.5;Coverage_Seq=0.9765258215962441;Coverage_Hmm=1.0
SEQF8405.1|CM002133.1	CCTyper	CDS	762989	763993	335	-	.	ID=SEQF8405.1|CM002133.1_794_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=-;E-value=2.4e-109;Score=363.2;Coverage_Seq=0.9641791044776119;Coverage_Hmm=0.958217270194986
SEQF8405.1|CM002133.1	CCTyper	CDS	764647	766314	556	-	.	ID=SEQF8405.1|CM002133.1_797_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=-;E-value=9.7e-92;Score=305.4;Coverage_Seq=0.89568345323741;Coverage_Hmm=0.9935483870967742
SEQF8405.1|CM002133.1	CCTyper	CDS	1875258	1877246	663	-	.	ID=SEQF8405.1|CM002133.1_1849_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=4.6e-199;Score=660.8;Coverage_Seq=0.832579185520362;Coverage_Hmm=0.6686746987951807
SEQF8405.1|CM002133.1	CCTyper	CDS	1877301	1878635	445	-	.	ID=SEQF8405.1|CM002133.1_1850_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_CAS-II-C;coding_strand=-;E-value=3.7e-82;Score=274.0;Coverage_Seq=0.7573033707865169;Coverage_Hmm=0.602112676056338
SEQF8405.1|CM002133.1	CCTyper	CDS	1874638	1875294	219	-	.	ID=SEQF8405.1|CM002133.1_1848_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=1.0999999999999999e-47;Score=159.9;Coverage_Seq=0.958904109589041;Coverage_Hmm=0.18571428571428572
SEQF8405.1|CM002133.1	CCTyper	CDS	764012	764356	115	-	.	ID=SEQF8405.1|CM002133.1_795_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=-;E-value=1.9e-34;Score=116.1;Coverage_Seq=0.8434782608695652;Coverage_Hmm=0.5025125628140703
SEQF8405.1|CM002133.1	CCTyper	CDS	764416	764637	74	-	.	ID=SEQF8405.1|CM002133.1_796_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=-;E-value=3.5e-16;Score=56.5;Coverage_Seq=0.8108108108108109;Coverage_Hmm=0.3015075376884422
SEQF8405.1|CM002133.1	CCTyper	CDS	1872965	1873438	158	-	.	ID=SEQF8405.1|CM002133.1_1845_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=4.2999999999999995e-69;Score=229.6;Coverage_Seq=0.9430379746835443;Coverage_Hmm=0.6834862385321101
SEQF8405.1|CM002133.1	CCTyper	CDS	759754	760659	302	-	.	ID=SEQF8405.1|CM002133.1_790_cas;Genome_ID=SEQF8405.1;Feature_type=CDS;Product=Cas Prediction : DEDDh_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.4e-35;Score=119.9;Coverage_Seq=0.5099337748344371;Coverage_Hmm=0.98125