SEQF8412.1|KV809550.1	CCTyper	repeat_region	43673	43898	226	+	.	ID=SEQF8412.1|KV809550.1_1;Genome_ID=SEQF8412.1;Note=Predictor:CCtyper;Start:43673;End:43898;Consensus_Repeat:GTTTTTGTACTCTCAAGATTTAAGTAAC;Number_of_Repeats:4;Repeat_Length:28;Average_Spacer_Length:38.0;Repeat_Identity:100.0;Spacer_Identity:48.1;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.973;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809550.1	CCTyper	direct_repeat	43673	43700	28	+	.	ID=SEQF8412.1|KV809550.1_1_REPEAT1;Parent=SEQF8412.1|KV809550.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809550.1	CCTyper	binding_site	43701	43738	38	+	.	ID=SEQF8412.1|KV809550.1_1_SPACER1;Parent=SEQF8412.1|KV809550.1_1;Note=CGTACAACCAAGGACTTTGATAGATACCAATATTACCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809550.1	CCTyper	direct_repeat	43739	43766	28	+	.	ID=SEQF8412.1|KV809550.1_1_REPEAT2;Parent=SEQF8412.1|KV809550.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809550.1	CCTyper	binding_site	43767	43804	38	+	.	ID=SEQF8412.1|KV809550.1_1_SPACER2;Parent=SEQF8412.1|KV809550.1_1;Note=CGTACAACTGCATTGCACTTGTTTTATATGTTTTGTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809550.1	CCTyper	direct_repeat	43805	43832	28	+	.	ID=SEQF8412.1|KV809550.1_1_REPEAT3;Parent=SEQF8412.1|KV809550.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809550.1	CCTyper	binding_site	43833	43870	38	+	.	ID=SEQF8412.1|KV809550.1_1_SPACER3;Parent=SEQF8412.1|KV809550.1_1;Note=TGTACAACTGAATCCATACAGGTTGAGATAGAGCCTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809550.1	CCTyper	direct_repeat	43871	43898	28	+	.	ID=SEQF8412.1|KV809550.1_1_REPEAT4;Parent=SEQF8412.1|KV809550.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	repeat_region	32361	32681	321	+	.	ID=SEQF8412.1|KV809625.1_2;Genome_ID=SEQF8412.1;Note=Predictor:CCtyper;Start:32361;End:32681;Consensus_Repeat:GATATAAACCTAATTACCTCGAGAGGGGACGGAAAC;Number_of_Repeats:5;Repeat_Length:36;Average_Spacer_Length:35.2;Repeat_Identity:93.8;Spacer_Identity:40.2;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.993;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	direct_repeat	32361	32396	36	+	.	ID=SEQF8412.1|KV809625.1_2_REPEAT1;Parent=SEQF8412.1|KV809625.1_2;Note=GATATAAACCTAATTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	binding_site	32397	32431	35	+	.	ID=SEQF8412.1|KV809625.1_2_SPACER1;Parent=SEQF8412.1|KV809625.1_2;Note=TTTACGATAGCAAAACGACCAGCGTAGCAATTTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	direct_repeat	32432	32467	36	+	.	ID=SEQF8412.1|KV809625.1_2_REPEAT2;Parent=SEQF8412.1|KV809625.1_2;Note=GATATAAACCTAATTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	binding_site	32468	32502	35	+	.	ID=SEQF8412.1|KV809625.1_2_SPACER2;Parent=SEQF8412.1|KV809625.1_2;Note=AGTCTTCTGACTGGTTGTTAATCCATTCTTGTAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	direct_repeat	32503	32538	36	+	.	ID=SEQF8412.1|KV809625.1_2_REPEAT3;Parent=SEQF8412.1|KV809625.1_2;Note=GATATAAACCTAATTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	binding_site	32539	32573	35	+	.	ID=SEQF8412.1|KV809625.1_2_SPACER3;Parent=SEQF8412.1|KV809625.1_2;Note=CTTATTGTGTTTACGTCTACCCCATTTCATCCCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	direct_repeat	32574	32609	36	+	.	ID=SEQF8412.1|KV809625.1_2_REPEAT4;Parent=SEQF8412.1|KV809625.1_2;Note=GATATAAACCTAATTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	binding_site	32610	32645	36	+	.	ID=SEQF8412.1|KV809625.1_2_SPACER4;Parent=SEQF8412.1|KV809625.1_2;Note=CTTAAATCGCATTTCCAACATGTAAGAACCCCCACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	direct_repeat	32646	32681	36	+	.	ID=SEQF8412.1|KV809625.1_2_REPEAT5;Parent=SEQF8412.1|KV809625.1_2;Note=GATATAAACCTAATTACCTCGAGAGGGGACGGANNN;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	repeat_region	32784	33456	673	+	.	ID=SEQF8412.1|KV809625.1_3;Genome_ID=SEQF8412.1;Note=Predictor:CCtyper;Start:32784;End:33456;Consensus_Repeat:CCTATATACCCCGAGAGGGGACGGAAAC;Number_of_Repeats:10;Repeat_Length:28;Average_Spacer_Length:43.7;Repeat_Identity:77.9;Spacer_Identity:48.4;Spacer_Length_Sem:1.5;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.999;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	direct_repeat	32784	32811	28	+	.	ID=SEQF8412.1|KV809625.1_3_REPEAT1;Parent=SEQF8412.1|KV809625.1_3;Note=CCTAATTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	binding_site	32812	32854	43	+	.	ID=SEQF8412.1|KV809625.1_3_SPACER1;Parent=SEQF8412.1|KV809625.1_3;Note=ACAGATGCAGCATAAATAGTGATATTGCCAAATGCGATATAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	direct_repeat	32855	32882	28	+	.	ID=SEQF8412.1|KV809625.1_3_REPEAT2;Parent=SEQF8412.1|KV809625.1_3;Note=CCCACTCATCTCGCGAGGGGACGGTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	binding_site	32883	32924	42	+	.	ID=SEQF8412.1|KV809625.1_3_SPACER2;Parent=SEQF8412.1|KV809625.1_3;Note=TTTTCGTTTAACGTTTCATTAATTAATTCGTTCAGATATAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	direct_repeat	32925	32952	28	+	.	ID=SEQF8412.1|KV809625.1_3_REPEAT3;Parent=SEQF8412.1|KV809625.1_3;Note=CCTATCCACCCCAAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	binding_site	32953	32997	45	+	.	ID=SEQF8412.1|KV809625.1_3_SPACER3;Parent=SEQF8412.1|KV809625.1_3;Note=TCCCCGACATTAACGCTATCGTACTGTTCCTTGCTGGGATATAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	direct_repeat	32998	33025	28	+	.	ID=SEQF8412.1|KV809625.1_3_REPEAT4;Parent=SEQF8412.1|KV809625.1_3;Note=TCTATATACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	binding_site	33026	33071	46	+	.	ID=SEQF8412.1|KV809625.1_3_SPACER4;Parent=SEQF8412.1|KV809625.1_3;Note=AAAATCTTTGTCAAACATCGTTGACCTCCAATTGTTTAGATATAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	direct_repeat	33072	33099	28	+	.	ID=SEQF8412.1|KV809625.1_3_REPEAT5;Parent=SEQF8412.1|KV809625.1_3;Note=CCTATTCACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	binding_site	33100	33143	44	+	.	ID=SEQF8412.1|KV809625.1_3_SPACER5;Parent=SEQF8412.1|KV809625.1_3;Note=ACGTGGATTGTCTGGCGTAGTGGTTAAAGCTACTGTGATATAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	direct_repeat	33144	33171	28	+	.	ID=SEQF8412.1|KV809625.1_3_REPEAT6;Parent=SEQF8412.1|KV809625.1_3;Note=CCTATGTACCTCGAGAGGGGACGGTTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	binding_site	33172	33206	35	+	.	ID=SEQF8412.1|KV809625.1_3_SPACER6;Parent=SEQF8412.1|KV809625.1_3;Note=TCAATGTAATCAATCCTATTATTTAGTTCTTTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	direct_repeat	33207	33234	28	+	.	ID=SEQF8412.1|KV809625.1_3_REPEAT7;Parent=SEQF8412.1|KV809625.1_3;Note=CCTATATACCCCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	binding_site	33235	33286	52	+	.	ID=SEQF8412.1|KV809625.1_3_SPACER7;Parent=SEQF8412.1|KV809625.1_3;Note=GCAGGAGTTTCACTCGTTCTTGGTGCAGTACTTGGTAAAGTACGGATATAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	direct_repeat	33287	33314	28	+	.	ID=SEQF8412.1|KV809625.1_3_REPEAT8;Parent=SEQF8412.1|KV809625.1_3;Note=CCTATCTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	binding_site	33315	33358	44	+	.	ID=SEQF8412.1|KV809625.1_3_SPACER8;Parent=SEQF8412.1|KV809625.1_3;Note=CTGCTAAATATGCTTCAAAAAGATCATTAATGTTTTGATATAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	direct_repeat	33359	33386	28	+	.	ID=SEQF8412.1|KV809625.1_3_REPEAT9;Parent=SEQF8412.1|KV809625.1_3;Note=CCTATCTACCTCGAGAGGGGGCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	binding_site	33387	33428	42	+	.	ID=SEQF8412.1|KV809625.1_3_SPACER9;Parent=SEQF8412.1|KV809625.1_3;Note=AGTATTATTTTTTTGTTCTTCCATTGTTGTTCTTGATAAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	direct_repeat	33429	33456	28	+	.	ID=SEQF8412.1|KV809625.1_3_REPEAT10;Parent=SEQF8412.1|KV809625.1_3;Note=TCTACCTACCTCGAGAGGGGACGGTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8412.1|KV809625.1	CCTyper	OPERON	30927	42151	11225	+	.	ID=SEQF8412.1|KV809625.1@2;Genome_ID=SEQF8412.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=18.0;Genes=Cas1_0_CAS-I-II-III-IV-V-VI,Cas2_2_CAS-I-II-III-IV-V-VI,Cas6_0_CAS-I-II-III-IV-V-VI,Cas10_1_CAS-III,Csm2gr11_7_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm4_0_IIIA,Csm5gr7_1_CAS-III-A-III-D,Csm6_1_CAS-III,Csm6_1_CAS-III;Positions=32,33,34,35,36,37,38,39,40,41;E-values=3.90e-81,5.10e-23,6.60e-31,4.90e-193,2.50e-22,2.80e-73,7.00e-40,1.10e-34,1.40e-96,1.70e-129;CoverageSeq=0.943,0.636,0.783,0.916,0.924,0.919,0.943,0.888,0.827,0.844;CoverageHMM=0.991,0.873,0.912,0.998,0.982,0.981,0.967,0.854,0.894,0.964;Strand_Interference=1;Strand_Adaptation=NA
SEQF8412.1|KV809550.1	CCTyper	OPERON	37761	43609	5849	+	.	ID=SEQF8412.1|KV809550.1@3;Genome_ID=SEQF8412.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-C;Best_score=9.0;Genes=Cas9_0_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_0_CAS-II-C;Positions=46,47,48,49;E-values=1.20e-192,3.30e-103,2.60e-32,3.60e-140;CoverageSeq=0.688,0.908,0.954,0.991;CoverageHMM=0.972,0.996,0.888,1.0;Strand_Interference=1;Strand_Adaptation=1
SEQF8412.1|KV809625.1	CCTyper	CDS	34370	36658	763	+	.	ID=SEQF8412.1|KV809625.1_35_cas;Genome_ID=SEQF8412.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=4.9e-193;Score=640.2;Coverage_Seq=0.9161205766710354;Coverage_Hmm=0.9984709480122325
SEQF8412.1|KV809625.1	CCTyper	CDS	30927	31931	335	+	.	ID=SEQF8412.1|KV809625.1_32_cas;Genome_ID=SEQF8412.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.9000000000000003e-81;Score=269.5;Coverage_Seq=0.9432835820895522;Coverage_Hmm=0.9905362776025236
SEQF8412.1|KV809550.1	CCTyper	CDS	41324	42235	304	+	.	ID=SEQF8412.1|KV809550.1_47_cas;Genome_ID=SEQF8412.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.3e-103;Score=341.6;Coverage_Seq=0.9078947368421053;Coverage_Hmm=0.9963636363636363
SEQF8412.1|KV809625.1	CCTyper	CDS	31931	32260	110	+	.	ID=SEQF8412.1|KV809625.1_33_cas;Genome_ID=SEQF8412.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=5.1e-23;Score=78.1;Coverage_Seq=0.6363636363636364;Coverage_Hmm=0.8734177215189873
SEQF8412.1|KV809550.1	CCTyper	CDS	42237	42560	108	+	.	ID=SEQF8412.1|KV809550.1_48_cas;Genome_ID=SEQF8412.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.6000000000000003e-32;Score=108.5;Coverage_Seq=0.9537037037037037;Coverage_Hmm=0.8879310344827587
SEQF8412.1|KV809625.1	CCTyper	CDS	33658	34389	244	+	.	ID=SEQF8412.1|KV809625.1_34_cas;Genome_ID=SEQF8412.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.6e-31;Score=105.2;Coverage_Seq=0.7827868852459017;Coverage_Hmm=0.9123711340206185
SEQF8412.1|KV809550.1	CCTyper	CDS	37761	41147	1129	+	.	ID=SEQF8412.1|KV809550.1_46_cas;Genome_ID=SEQF8412.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=1.2e-192;Score=639.4;Coverage_Seq=0.6882196634189548;Coverage_Hmm=0.9722891566265061
SEQF8412.1|KV809625.1	CCTyper	CDS	36662	37054	131	+	.	ID=SEQF8412.1|KV809625.1_36_cas;Genome_ID=SEQF8412.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=+;E-value=2.5000000000000002e-22;Score=76.9;Coverage_Seq=0.9236641221374046;Coverage_Hmm=0.9818181818181818
SEQF8412.1|KV809625.1	CCTyper	CDS	37054	37716	221	+	.	ID=SEQF8412.1|KV809625.1_37_cas;Genome_ID=SEQF8412.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=2.8e-73;Score=243.2;Coverage_Seq=0.918552036199095;Coverage_Hmm=0.9813953488372092
SEQF8412.1|KV809625.1	CCTyper	CDS	37718	38617	300	+	.	ID=SEQF8412.1|KV809625.1_38_cas;Genome_ID=SEQF8412.1;Feature_type=CDS;Product=Cas Prediction : Csm4_0_IIIA;coding_strand=+;E-value=6.9999999999999995e-40;Score=134.1;Coverage_Seq=0.9433333333333334;Coverage_Hmm=0.9668874172185431
SEQF8412.1|KV809625.1	CCTyper	CDS	38620	39693	358	+	.	ID=SEQF8412.1|KV809625.1_39_cas;Genome_ID=SEQF8412.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=1.1e-34;Score=117.7;Coverage_Seq=0.888268156424581;Coverage_Hmm=0.8536585365853658
SEQF8412.1|KV809625.1	CCTyper	CDS	39690	40850	387	+	.	ID=SEQF8412.1|KV809625.1_40_cas;Genome_ID=SEQF8412.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=1.3999999999999999e-96;Score=320.5;Coverage_Seq=0.8268733850129198;Coverage_Hmm=0.8944444444444445
SEQF8412.1|KV809625.1	CCTyper	CDS	40865	42151	429	+	.	ID=SEQF8412.1|KV809625.1_41_cas;Genome_ID=SEQF8412.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=1.6999999999999997e-129;Score=428.8;Coverage_Seq=0.8438228438228438;Coverage_Hmm=0.9638888888888889
SEQF8412.1|KV809550.1	CCTyper	CDS	42557	43609	351	+	.	ID=SEQF8412.1|KV809550.1_49_cas;Genome_ID=SEQF8412.1;Feature_type=CDS;Product=Cas Prediction : Csn2_0_CAS-II-C;coding_strand=+;E-value=3.6e-140;Score=463.8;Coverage_Seq=0.9914529914529915;Coverage_Hmm=1.0