SEQF8578.1|RJNF01000003.1	CCTyper	repeat_region	4628	5653	1026	+	.	ID=SEQF8578.1|RJNF01000003.1_1;Genome_ID=SEQF8578.1;Note=Predictor:CCtyper;Start:4628;End:5653;Consensus_Repeat:GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Number_of_Repeats:16;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:100.0;Spacer_Identity:41.9;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	direct_repeat	4628	4663	36	+	.	ID=SEQF8578.1|RJNF01000003.1_1_REPEAT1;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	binding_site	4664	4693	30	+	.	ID=SEQF8578.1|RJNF01000003.1_1_SPACER1;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GCTACCACGAACCAAAGCAAGACTAATCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	direct_repeat	4694	4729	36	+	.	ID=SEQF8578.1|RJNF01000003.1_1_REPEAT2;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	binding_site	4730	4759	30	+	.	ID=SEQF8578.1|RJNF01000003.1_1_SPACER2;Parent=SEQF8578.1|RJNF01000003.1_1;Note=CAACAAGGTTGAGTTGAAAGCCGAAAATGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	direct_repeat	4760	4795	36	+	.	ID=SEQF8578.1|RJNF01000003.1_1_REPEAT3;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	binding_site	4796	4825	30	+	.	ID=SEQF8578.1|RJNF01000003.1_1_SPACER3;Parent=SEQF8578.1|RJNF01000003.1_1;Note=TTAACAATGAAAAAACTATTTAGCTGGCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	direct_repeat	4826	4861	36	+	.	ID=SEQF8578.1|RJNF01000003.1_1_REPEAT4;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	binding_site	4862	4891	30	+	.	ID=SEQF8578.1|RJNF01000003.1_1_SPACER4;Parent=SEQF8578.1|RJNF01000003.1_1;Note=CTTGCCAGTTGTTATTGAACCAATCTCTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	direct_repeat	4892	4927	36	+	.	ID=SEQF8578.1|RJNF01000003.1_1_REPEAT5;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	binding_site	4928	4957	30	+	.	ID=SEQF8578.1|RJNF01000003.1_1_SPACER5;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GAACGGTATGCGTTCTATCGCTCGAAGGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	direct_repeat	4958	4993	36	+	.	ID=SEQF8578.1|RJNF01000003.1_1_REPEAT6;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	binding_site	4994	5023	30	+	.	ID=SEQF8578.1|RJNF01000003.1_1_SPACER6;Parent=SEQF8578.1|RJNF01000003.1_1;Note=TACTGGTCTTCAACCCATTGCGCACTGTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	direct_repeat	5024	5059	36	+	.	ID=SEQF8578.1|RJNF01000003.1_1_REPEAT7;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	binding_site	5060	5089	30	+	.	ID=SEQF8578.1|RJNF01000003.1_1_SPACER7;Parent=SEQF8578.1|RJNF01000003.1_1;Note=TCAGAGACAAGAATGGCAAAGAAATCTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	direct_repeat	5090	5125	36	+	.	ID=SEQF8578.1|RJNF01000003.1_1_REPEAT8;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	binding_site	5126	5155	30	+	.	ID=SEQF8578.1|RJNF01000003.1_1_SPACER8;Parent=SEQF8578.1|RJNF01000003.1_1;Note=CGTCAGAACGTATCTGTCCATAATGGATGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	direct_repeat	5156	5191	36	+	.	ID=SEQF8578.1|RJNF01000003.1_1_REPEAT9;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	binding_site	5192	5221	30	+	.	ID=SEQF8578.1|RJNF01000003.1_1_SPACER9;Parent=SEQF8578.1|RJNF01000003.1_1;Note=AGAAAATCAATGATCAATAATGTCGAAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	direct_repeat	5222	5257	36	+	.	ID=SEQF8578.1|RJNF01000003.1_1_REPEAT10;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	binding_site	5258	5287	30	+	.	ID=SEQF8578.1|RJNF01000003.1_1_SPACER10;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GCATCAAACCAATTGATGGTGTACCAGCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	direct_repeat	5288	5323	36	+	.	ID=SEQF8578.1|RJNF01000003.1_1_REPEAT11;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	binding_site	5324	5353	30	+	.	ID=SEQF8578.1|RJNF01000003.1_1_SPACER11;Parent=SEQF8578.1|RJNF01000003.1_1;Note=CCATTGACCCACCGAACTATTTGGGCACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	direct_repeat	5354	5389	36	+	.	ID=SEQF8578.1|RJNF01000003.1_1_REPEAT12;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	binding_site	5390	5419	30	+	.	ID=SEQF8578.1|RJNF01000003.1_1_SPACER12;Parent=SEQF8578.1|RJNF01000003.1_1;Note=AGACACACGTGTGTCAATTGTTTCATTGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	direct_repeat	5420	5455	36	+	.	ID=SEQF8578.1|RJNF01000003.1_1_REPEAT13;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	binding_site	5456	5485	30	+	.	ID=SEQF8578.1|RJNF01000003.1_1_SPACER13;Parent=SEQF8578.1|RJNF01000003.1_1;Note=CAAAAAACGCACCAGACCCCGTAGAGCTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	direct_repeat	5486	5521	36	+	.	ID=SEQF8578.1|RJNF01000003.1_1_REPEAT14;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	binding_site	5522	5551	30	+	.	ID=SEQF8578.1|RJNF01000003.1_1_SPACER14;Parent=SEQF8578.1|RJNF01000003.1_1;Note=CGGTCTAGGTGCTGAAATCGTGGCAGTCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	direct_repeat	5552	5587	36	+	.	ID=SEQF8578.1|RJNF01000003.1_1_REPEAT15;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	binding_site	5588	5617	30	+	.	ID=SEQF8578.1|RJNF01000003.1_1_SPACER15;Parent=SEQF8578.1|RJNF01000003.1_1;Note=TGAACTAATTAAGACGATTGGAGAACACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	direct_repeat	5618	5653	36	+	.	ID=SEQF8578.1|RJNF01000003.1_1_REPEAT16;Parent=SEQF8578.1|RJNF01000003.1_1;Note=GTTTTAGAGCTGCCTTGTTTCGAATGGTTTCACCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF8578.1|RJNF01000003.1	CCTyper	OPERON	1	4307	4307	+	.	ID=SEQF8578.1|RJNF01000003.1@1;Genome_ID=SEQF8578.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=1,2,3,4;E-values=3.80e-193,3.90e-102,2.30e-48,1.50e-101;CoverageSeq=0.98,0.928,0.955,0.982;CoverageHMM=0.656,0.996,0.922,0.991;Strand_Interference=1;Strand_Adaptation=1
SEQF8578.1|RJNF01000003.1	CCTyper	CDS	2448	3317	290	+	.	ID=SEQF8578.1|RJNF01000003.1_2_cas;Genome_ID=SEQF8578.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.9e-102;Score=338.1;Coverage_Seq=0.9275862068965517;Coverage_Hmm=0.9963636363636363
SEQF8578.1|RJNF01000003.1	CCTyper	CDS	3329	3658	110	+	.	ID=SEQF8578.1|RJNF01000003.1_3_cas;Genome_ID=SEQF8578.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.3e-48;Score=160.3;Coverage_Seq=0.9545454545454546;Coverage_Hmm=0.9224137931034483
SEQF8578.1|RJNF01000003.1	CCTyper	CDS	1	2448	816	+	.	ID=SEQF8578.1|RJNF01000003.1_1_cas;Genome_ID=SEQF8578.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=3.8e-193;Score=641.5;Coverage_Seq=0.9803921568627451;Coverage_Hmm=0.65625
SEQF8578.1|RJNF01000003.1	CCTyper	CDS	3648	4307	220	+	.	ID=SEQF8578.1|RJNF01000003.1_4_cas;Genome_ID=SEQF8578.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=1.5e-101;Score=335.6;Coverage_Seq=0.9818181818181818;Coverage_Hmm=0.9908256880733946